RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-209ENST00000542700 C6orf99Q4VX62 202 aa4.46□□□□□ -1.7
CHMP4A-209ENST00000542700 LYRM7Q5U5X0 104 aa4.46□□□□□ -1.7
CHMP4A-209ENST00000542700 COX7BP24311 80 aa4.45□□□□□ -1.7
CHMP4A-209ENST00000542700 CLEC2BQ92478 149 aa4.45□□□□□ -1.7
CHMP4A-209ENST00000542700 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
CHMP4A-209ENST00000542700 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
CHMP4A-209ENST00000542700 PRYO14603 147 aa4.44□□□□□ -1.7
CHMP4A-209ENST00000542700 ZNF73O43830 326 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-209ENST00000542700 SNCGO76070 127 aa4.44□□□□□ -1.7
CHMP4A-209ENST00000542700 GTF2H5Q6ZYL4 71 aa4.44□□□□□ -1.7
CHMP4A-209ENST00000542700 KCNQ1DNQ9H478 68 aa4.44□□□□□ -1.7
CHMP4A-209ENST00000542700 SLC25A20O43772 301 aa4.43□□□□□ -1.7
CHMP4A-209ENST00000542700 TCL1BO95988 128 aa4.43□□□□□ -1.7
CHMP4A-209ENST00000542700 ATXN8Q156A1 80 aa4.43□□□□□ -1.7
CHMP4A-209ENST00000542700 FAM19A1Q7Z5A9 133 aa4.43□□□□□ -1.7
CHMP4A-209ENST00000542700 TRBV20-1A0A075B6N2 111 aa4.42□□□□□ -1.7
CHMP4A-209ENST00000542700 TRBV7-6A0A0J9YX20 115 aa4.41□□□□□ -1.7
CHMP4A-209ENST00000542700 H3BMG7 143 aa4.41□□□□□ -1.7
CHMP4A-209ENST00000542700 K7EP34 96 aa4.41□□□□□ -1.7
CHMP4A-209ENST00000542700 LINC00575Q6W349 94 aa4.41□□□□□ -1.7
CHMP4A-209ENST00000542700 KRTAP11-1Q8IUC1 163 aa4.41□□□□□ -1.7
CHMP4A-209ENST00000542700 TYMSOSQ8TAI1 123 aa4.41□□□□□ -1.7
CHMP4A-209ENST00000542700 A0A087X002 238 aa4.4□□□□□ -1.71
CHMP4A-209ENST00000542700 hADV29S1A0JD25 119 aa4.4□□□□□ -1.71
CHMP4A-209ENST00000542700 B5MCH6 92 aa4.4□□□□□ -1.71
CHMP4A-209ENST00000542700 DNAL4O96015 105 aa4.4□□□□□ -1.71
CHMP4A-209ENST00000542700 UBE2AP49459 152 aa4.4□□□□□ -1.71
CHMP4A-209ENST00000542700 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
CHMP4A-209ENST00000542700 FAM218AQ96MZ4 157 aa4.4□□□□□ -1.71
CHMP4A-209ENST00000542700 C9JAW5 83 aa4.39□□□□□ -1.71
CHMP4A-209ENST00000542700 LST1O00453 97 aa4.39□□□□□ -1.71
CHMP4A-209ENST00000542700 TRACP01848 142 aa4.39□□□□□ -1.71
CHMP4A-209ENST00000542700 SPRR1AP35321 89 aa4.39□□□□□ -1.71
CHMP4A-209ENST00000542700 ELOF1P60002 83 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-209ENST00000542700 SMCR5Q8TEV8 140 aa4.39□□□□□ -1.71
CHMP4A-209ENST00000542700 A0A1B0GX51 115 aa4.38□□□□□ -1.71
CHMP4A-209ENST00000542700 BAALC-AS2P0C853 105 aa4.38□□□□□ -1.71
CHMP4A-209ENST00000542700 PRLHP81277 87 aa4.38□□□□□ -1.71
CHMP4A-209ENST00000542700 KRTAP13-3Q3SY46 172 aa4.38□□□□□ -1.71
CHMP4A-209ENST00000542700 MTURNQ8N3F0 131 aa4.38□□□□□ -1.71
CHMP4A-209ENST00000542700 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
CHMP4A-209ENST00000542700 BCE1O60756 84 aa4.37□□□□□ -1.71
CHMP4A-209ENST00000542700 Q6ZRX8 168 aa4.37□□□□□ -1.71
CHMP4A-209ENST00000542700 DEFB105AQ8NG35 78 aa4.37□□□□□ -1.71
CHMP4A-209ENST00000542700 HIGD2AQ9BW72 106 aa4.37□□□□□ -1.71
CHMP4A-209ENST00000542700 ORMDL1Q9P0S3 153 aa4.37□□□□□ -1.71
CHMP4A-209ENST00000542700 F8W1H4 67 aa4.36□□□□□ -1.71
CHMP4A-209ENST00000542700 ERC2-IT1O76042 136 aa4.35□□□□□ -1.71
CHMP4A-209ENST00000542700 GHRHP01286 108 aa4.35□□□□□ -1.71
CHMP4A-209ENST00000542700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-209ENST00000542700 Q6ZQY7 126 aa4.35□□□□□ -1.71
CHMP4A-209ENST00000542700 LINC00304Q8N9R0 145 aa4.35□□□□□ -1.71
CHMP4A-209ENST00000542700 Q9BRP9 147 aa4.35□□□□□ -1.71
CHMP4A-209ENST00000542700 OCIAD2Q56VL3 154 aa4.34□□□□□ -1.71
CHMP4A-209ENST00000542700 ANKRD29Q8N6D5 301 aa4.34□□□□□ -1.71
CHMP4A-209ENST00000542700 ST20-AS1Q8NBB2 130 aa4.34□□□□□ -1.71
CHMP4A-209ENST00000542700 H3BQ85 93 aa4.33□□□□□ -1.72
CHMP4A-209ENST00000542700 H3BT86 120 aa4.33□□□□□ -1.72
CHMP4A-209ENST00000542700 TMEM256-PLSCR3K7ERE1 68 aa4.33□□□□□ -1.72
CHMP4A-209ENST00000542700 ZNF861PO60384 105 aa4.33□□□□□ -1.72
CHMP4A-209ENST00000542700 LAMTOR3Q9UHA4 124 aa4.33□□□□□ -1.72
CHMP4A-209ENST00000542700 GAGE2AQ6NT46 116 aa4.32□□□□□ -1.72
CHMP4A-209ENST00000542700 PRO0461Q9UI25 63 aa4.32□□□□□ -1.72
CHMP4A-209ENST00000542700 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
CHMP4A-209ENST00000542700 TEX49A0A1B0GTD5 131 aa4.31□□□□□ -1.72
CHMP4A-209ENST00000542700 A0A1B0GV72 72 aa4.31□□□□□ -1.72
CHMP4A-209ENST00000542700 ETDBQ3ZM63 59 aa4.31□□□□□ -1.72
CHMP4A-209ENST00000542700 Q8N377 158 aa4.31□□□□□ -1.72
CHMP4A-209ENST00000542700 NDUFV3P56181 108 aaKnown RBP4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 KRTAP13-2Q52LG2 175 aa4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 FP248Q71RG6 208 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 LINC00846Q9NV44 126 aa4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 ANAPC11Q9NYG5 84 aa4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 ZNF706Q9Y5V0 76 aaPredicted RBP4.3□□□□□ -1.72
CHMP4A-209ENST00000542700 IGLV8-61A0A075B6I0 122 aa4.29□□□□□ -1.72
CHMP4A-209ENST00000542700 JMJD7-PLA2G4BH0Y9G9 81 aa4.29□□□□□ -1.72
CHMP4A-209ENST00000542700 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
CHMP4A-209ENST00000542700 F8WEM9 126 aa4.28□□□□□ -1.72
CHMP4A-209ENST00000542700 TEN1Q86WV5 123 aa4.28□□□□□ -1.72
CHMP4A-209ENST00000542700 C3orf22Q8N5N4 141 aa4.28□□□□□ -1.72
CHMP4A-209ENST00000542700 PPDPFLQ8WWR9 84 aa4.28□□□□□ -1.72
CHMP4A-209ENST00000542700 SPRR4Q96PI1 79 aa4.28□□□□□ -1.72
CHMP4A-209ENST00000542700 IGLV5-48A0A075B6I7 105 aa4.27□□□□□ -1.73
CHMP4A-209ENST00000542700 RBM3P98179 157 aaKnown RBP4.27□□□□□ -1.73
CHMP4A-209ENST00000542700 SPRR1BP22528 89 aa4.26□□□□□ -1.73
CHMP4A-209ENST00000542700 XP32Q5T750 250 aa4.26□□□□□ -1.73
CHMP4A-209ENST00000542700 DSCR8Q96T75 97 aa4.26□□□□□ -1.73
CHMP4A-209ENST00000542700 C14orf132Q9NPU4 83 aa4.26□□□□□ -1.73
CHMP4A-209ENST00000542700 IGLV9-49A0A0B4J1Y8 123 aa4.25□□□□□ -1.73
CHMP4A-209ENST00000542700 C9orf153Q5TBE3 101 aa4.25□□□□□ -1.73
CHMP4A-209ENST00000542700 SMIM29Q86T20 159 aa4.25□□□□□ -1.73
CHMP4A-209ENST00000542700 VPS25Q9BRG1 176 aa4.25□□□□□ -1.73
CHMP4A-209ENST00000542700 PCOTHQ58A44 107 aa4.24□□□□□ -1.73
CHMP4A-209ENST00000542700 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
CHMP4A-209ENST00000542700 J3QR89 54 aa4.23□□□□□ -1.73
CHMP4A-209ENST00000542700 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
CHMP4A-209ENST00000542700 OBSCN-AS1Q96MR7 158 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms