RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 C20orf166-AS1Q96NR2 134 aa2.49□□□□□ -2.01
C2CD3-218ENST00000542484 CCL19Q99731 98 aa2.49□□□□□ -2.01
C2CD3-218ENST00000542484 CACNA1HO95180 2353 aa2.49□□□□□ -2.01
C2CD3-218ENST00000542484 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 H3BNG1 76 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 K7ERS5 55 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 LY6G6CO95867 125 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 DEFB113Q30KQ7 82 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 LINC00304Q8N9R0 145 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 MKI67P46013 3256 aaKnown RBP2.48□□□□□ -2.01
C2CD3-218ENST00000542484 ANKHD1Q8IWZ3 2542 aaKnown RBP2.48□□□□□ -2.01
C2CD3-218ENST00000542484 ALMS1Q8TCU4 4167 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 CFAP47Q6ZTR5 3102 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 TRIOO75962 3097 aa2.48□□□□□ -2.01
C2CD3-218ENST00000542484 FRYLO94915 3013 aa2.47□□□□□ -2.01
C2CD3-218ENST00000542484 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
C2CD3-218ENST00000542484 Q96NJ1 140 aa2.47□□□□□ -2.01
C2CD3-218ENST00000542484 NCOR1O75376 2440 aa2.47□□□□□ -2.01
C2CD3-218ENST00000542484 C2CD3Q4AC94 2353 aa2.46□□□□□ -2.01
C2CD3-218ENST00000542484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.46□□□□□ -2.021e-5■■■■□ 21.5
C2CD3-218ENST00000542484 ABCA2Q9BZC7 2435 aa2.46□□□□□ -2.02
C2CD3-218ENST00000542484 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
C2CD3-218ENST00000542484 Q5W150 140 aa2.46□□□□□ -2.02
C2CD3-218ENST00000542484 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
C2CD3-218ENST00000542484 CIRBP-AS1Q8TBR5 109 aa2.46□□□□□ -2.02
C2CD3-218ENST00000542484 PIEZO2Q9H5I5 2752 aa2.46□□□□□ -2.02
C2CD3-218ENST00000542484 KALRNO60229 2985 aa2.46□□□□□ -2.02
C2CD3-218ENST00000542484 PRLHP81277 87 aa2.45□□□□□ -2.02
C2CD3-218ENST00000542484 LINC01556Q5JQF7 62 aa2.45□□□□□ -2.02
C2CD3-218ENST00000542484 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
C2CD3-218ENST00000542484 DSPP15924 2871 aaKnown RBP2.45□□□□□ -2.02
C2CD3-218ENST00000542484 LAMA2P24043 3122 aaKnown RBP2.44□□□□□ -2.02
C2CD3-218ENST00000542484 CEP290O15078 2479 aa2.44□□□□□ -2.02
C2CD3-218ENST00000542484 HTN3P15516 51 aa2.44□□□□□ -2.02
C2CD3-218ENST00000542484 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
C2CD3-218ENST00000542484 USP34Q70CQ2 3546 aa2.44□□□□□ -2.02
C2CD3-218ENST00000542484 BRCA2P51587 3418 aa2.43□□□□□ -2.02
C2CD3-218ENST00000542484 KMT2BQ9UMN6 2715 aaPredicted RBP2.43□□□□□ -2.02
C2CD3-218ENST00000542484 A0A087WTM6 91 aa2.43□□□□□ -2.02
C2CD3-218ENST00000542484 LAMA1P25391 3075 aa2.43□□□□□ -2.02
C2CD3-218ENST00000542484 ACACAQ13085 2346 aa2.42□□□□□ -2.02
C2CD3-218ENST00000542484 K7EIL1 84 aa2.42□□□□□ -2.02
C2CD3-218ENST00000542484 SSBP3-AS1Q7Z2R9 100 aa2.42□□□□□ -2.02
C2CD3-218ENST00000542484 CREBBPQ92793 2442 aa2.42□□□□□ -2.02
C2CD3-218ENST00000542484 ZDBF2Q9HCK1 2354 aa2.42□□□□□ -2.02
C2CD3-218ENST00000542484 AKAP13Q12802 2813 aa2.41□□□□□ -2.02
C2CD3-218ENST00000542484 WDFY4Q6ZS81 3184 aa2.41□□□□□ -2.02
C2CD3-218ENST00000542484 SPTBN5Q9NRC6 3674 aaKnown RBP2.41□□□□□ -2.02
C2CD3-218ENST00000542484 H0YAA0 97 aa2.41□□□□□ -2.02
C2CD3-218ENST00000542484 DEFB4AO15263 64 aa2.41□□□□□ -2.02
C2CD3-218ENST00000542484 DEFB135Q30KP9 77 aa2.41□□□□□ -2.02
C2CD3-218ENST00000542484 LAMA3Q16787 3333 aa2.41□□□□□ -2.02
C2CD3-218ENST00000542484 REV3LO60673 3130 aa2.4□□□□□ -2.02
C2CD3-218ENST00000542484 FREM2Q5SZK8 3169 aa2.4□□□□□ -2.03
C2CD3-218ENST00000542484 SPTAN1Q13813 2472 aaKnown RBP2.4□□□□□ -2.03
C2CD3-218ENST00000542484 PRUNE2Q8WUY3 3088 aa2.4□□□□□ -2.03
C2CD3-218ENST00000542484 A0A096LNI7 61 aa2.39□□□□□ -2.03
C2CD3-218ENST00000542484 A0A1B0GU33 70 aa2.39□□□□□ -2.03
C2CD3-218ENST00000542484 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
C2CD3-218ENST00000542484 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
C2CD3-218ENST00000542484 Q6ZSA8 131 aa2.39□□□□□ -2.03
C2CD3-218ENST00000542484 PSORS1C2Q9UIG4 136 aa2.39□□□□□ -2.03
C2CD3-218ENST00000542484 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
C2CD3-218ENST00000542484 PRRC2CQ9Y520 2896 aaKnown RBP2.38□□□□□ -2.03
C2CD3-218ENST00000542484 CHD6Q8TD26 2715 aa2.38□□□□□ -2.03
C2CD3-218ENST00000542484 TACC2O95359 2948 aa2.38□□□□□ -2.03
C2CD3-218ENST00000542484 VCANP13611 3396 aa2.37□□□□□ -2.03
C2CD3-218ENST00000542484 MAP1AP78559 2803 aaPredicted RBP2.37□□□□□ -2.03
C2CD3-218ENST00000542484 DMXL2Q8TDJ6 3036 aa2.37□□□□□ -2.03
C2CD3-218ENST00000542484 SPTA1P02549 2419 aa2.37□□□□□ -2.03
C2CD3-218ENST00000542484 SPG11Q96JI7 2443 aa2.37□□□□□ -2.03
C2CD3-218ENST00000542484 ANKRD17O75179 2603 aaKnown RBP2.37□□□□□ -2.03
C2CD3-218ENST00000542484 TRIOBPQ9H2D6 2365 aa2.36□□□□□ -2.03
C2CD3-218ENST00000542484 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
C2CD3-218ENST00000542484 KRTAP13-1Q8IUC0 172 aa2.36□□□□□ -2.03
C2CD3-218ENST00000542484 DCHS1Q96JQ0 3298 aa2.36□□□□□ -2.03
C2CD3-218ENST00000542484 DMDP11532 3685 aa2.35□□□□□ -2.03
C2CD3-218ENST00000542484 WDFY3Q8IZQ1 3526 aa2.35□□□□□ -2.03
C2CD3-218ENST00000542484 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
C2CD3-218ENST00000542484 CDH23Q9H251 3354 aa2.35□□□□□ -2.03
C2CD3-218ENST00000542484 NCOR2Q9Y618 2525 aa2.34□□□□□ -2.03
C2CD3-218ENST00000542484 NBASA2RRP1 2371 aa2.34□□□□□ -2.03
C2CD3-218ENST00000542484 NBDYA0A0U1RRE5 68 aa2.34□□□□□ -2.03
C2CD3-218ENST00000542484 COX6B2Q6YFQ2 88 aa2.34□□□□□ -2.03
C2CD3-218ENST00000542484 ITPR1Q14643 2758 aa2.34□□□□□ -2.04
C2CD3-218ENST00000542484 HRNRQ86YZ3 2850 aaPredicted RBP2.33□□□□□ -2.04
C2CD3-218ENST00000542484 SPINK1P00995 79 aa2.33□□□□□ -2.04
C2CD3-218ENST00000542484 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
C2CD3-218ENST00000542484 SPINK6Q6UWN8 80 aa2.33□□□□□ -2.04
C2CD3-218ENST00000542484 SPEGQ15772 3267 aa2.33□□□□□ -2.04
C2CD3-218ENST00000542484 SPTBN4Q9H254 2564 aa2.32□□□□□ -2.04
C2CD3-218ENST00000542484 IGF2RP11717 2491 aa2.32□□□□□ -2.04
C2CD3-218ENST00000542484 CSPG4Q6UVK1 2322 aa2.31□□□□□ -2.04
C2CD3-218ENST00000542484 NOTCH2Q04721 2471 aa2.31□□□□□ -2.04
C2CD3-218ENST00000542484 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
C2CD3-218ENST00000542484 KRTAP13-2Q52LG2 175 aa2.31□□□□□ -2.04
C2CD3-218ENST00000542484 GVINP1Q7Z2Y8 2422 aa2.31□□□□□ -2.04
C2CD3-218ENST00000542484 TENM2Q9NT68 2774 aa2.31□□□□□ -2.04
C2CD3-218ENST00000542484 DCHS2Q6V1P9 2916 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms