RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
YBX3-212ENST00000542002 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
YBX3-212ENST00000542002 TEX49A0A1B0GTD5 131 aa5.5□□□□□ -1.53
YBX3-212ENST00000542002 Q1RN00 199 aa5.5□□□□□ -1.53
YBX3-212ENST00000542002 LINC00575Q6W349 94 aa5.5□□□□□ -1.53
YBX3-212ENST00000542002 Q8N377 158 aa5.5□□□□□ -1.53
YBX3-212ENST00000542002 A0A0G2JQZ4 141 aa5.49□□□□□ -1.53
YBX3-212ENST00000542002 LAMTOR3Q9UHA4 124 aa5.48□□□□□ -1.53
YBX3-212ENST00000542002 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
YBX3-212ENST00000542002 H7C2G1 150 aa5.47□□□□□ -1.53
YBX3-212ENST00000542002 VAMP3Q15836 100 aa5.47□□□□□ -1.53
YBX3-212ENST00000542002 HRCT1Q6UXD1 115 aa5.47□□□□□ -1.53
YBX3-212ENST00000542002 CEND1Q8N111 149 aa5.47□□□□□ -1.53
YBX3-212ENST00000542002 FXYD2P54710 66 aa5.46□□□□□ -1.54
YBX3-212ENST00000542002 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.54
YBX3-212ENST00000542002 TPRXLQ17RH7 258 aa5.46□□□□□ -1.54
YBX3-212ENST00000542002 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
YBX3-212ENST00000542002 hADV29S1A0JD25 119 aa5.45□□□□□ -1.54
YBX3-212ENST00000542002 A0A0B4J2C4 111 aa5.44□□□□□ -1.54
YBX3-212ENST00000542002 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
YBX3-212ENST00000542002 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
YBX3-212ENST00000542002 Q6ZQY7 126 aa5.44□□□□□ -1.54
YBX3-212ENST00000542002 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
YBX3-212ENST00000542002 RAB37Q96AX2 223 aa5.44□□□□□ -1.54
YBX3-212ENST00000542002 FAM218AQ96MZ4 157 aa5.44□□□□□ -1.54
YBX3-212ENST00000542002 NHP2Q9NX24 153 aaKnown RBP5.44□□□□□ -1.54
YBX3-212ENST00000542002 SLC25A20O43772 301 aa5.43□□□□□ -1.54
YBX3-212ENST00000542002 PRO1933Q9H354 126 aa5.43□□□□□ -1.54
YBX3-212ENST00000542002 BVES-AS1Q5T3Y7 98 aa5.42□□□□□ -1.54
YBX3-212ENST00000542002 CDIP1Q9H305 208 aa5.42□□□□□ -1.54
YBX3-212ENST00000542002 PRO1854Q9UHT4 67 aa5.42□□□□□ -1.54
YBX3-212ENST00000542002 K7ERJ3 54 aa5.4□□□□□ -1.54
YBX3-212ENST00000542002 CD164Q04900 197 aa5.4□□□□□ -1.54
YBX3-212ENST00000542002 HSD52Q0P140 79 aa5.4□□□□□ -1.54
YBX3-212ENST00000542002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.4□□□□□ -1.54
YBX3-212ENST00000542002 UQCR10Q9UDW1 63 aa5.4□□□□□ -1.54
YBX3-212ENST00000542002 IGLV8-61A0A075B6I0 122 aa5.38□□□□□ -1.55
YBX3-212ENST00000542002 TMEM238LA0A1B0GVL6 79 aa5.38□□□□□ -1.55
YBX3-212ENST00000542002 H0YGX0 51 aa5.38□□□□□ -1.55
YBX3-212ENST00000542002 TRIAP1O43715 76 aa5.38□□□□□ -1.55
YBX3-212ENST00000542002 OCIAD2Q56VL3 154 aa5.38□□□□□ -1.55
YBX3-212ENST00000542002 Q5XG85 94 aa5.37□□□□□ -1.55
YBX3-212ENST00000542002 IGFL1Q6UW32 110 aa5.37□□□□□ -1.55
YBX3-212ENST00000542002 H3BUT2 72 aa5.36□□□□□ -1.55
YBX3-212ENST00000542002 C1orf195Q5TG92 126 aa5.36□□□□□ -1.55
YBX3-212ENST00000542002 CLEC2BQ92478 149 aa5.36□□□□□ -1.55
YBX3-212ENST00000542002 LIMD2Q9BT23 127 aa5.36□□□□□ -1.55
YBX3-212ENST00000542002 F8WEM9 126 aa5.35□□□□□ -1.55
YBX3-212ENST00000542002 PPDPFLQ8WWR9 84 aa5.35□□□□□ -1.55
YBX3-212ENST00000542002 SNHG12Q9BXW3 62 aa5.35□□□□□ -1.55
YBX3-212ENST00000542002 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.55
YBX3-212ENST00000542002 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.56
YBX3-212ENST00000542002 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
YBX3-212ENST00000542002 NDUFV3P56181 108 aaKnown RBP5.33□□□□□ -1.56
YBX3-212ENST00000542002 Q6JHZ5 121 aa5.33□□□□□ -1.56
YBX3-212ENST00000542002 TRBV7-7A0A0K0K1E9 115 aa5.32□□□□□ -1.56
YBX3-212ENST00000542002 A0A1B0GX51 115 aa5.32□□□□□ -1.56
YBX3-212ENST00000542002 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
YBX3-212ENST00000542002 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
YBX3-212ENST00000542002 PSMB2P49721 201 aa5.31□□□□□ -1.56
YBX3-212ENST00000542002 SNCGO76070 127 aa5.3□□□□□ -1.56
YBX3-212ENST00000542002 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
YBX3-212ENST00000542002 FABP2P12104 132 aa5.3□□□□□ -1.56
YBX3-212ENST00000542002 H3BMG7 143 aa5.29□□□□□ -1.56
YBX3-212ENST00000542002 TCL1BO95988 128 aa5.29□□□□□ -1.56
YBX3-212ENST00000542002 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
YBX3-212ENST00000542002 Q6Q795 121 aa5.27□□□□□ -1.57
YBX3-212ENST00000542002 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
YBX3-212ENST00000542002 COX6CP09669 75 aa5.26□□□□□ -1.57
YBX3-212ENST00000542002 SCGB1C2P0DMR2 95 aa5.26□□□□□ -1.57
YBX3-212ENST00000542002 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
YBX3-212ENST00000542002 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
YBX3-212ENST00000542002 NAA38Q9BRA0 125 aaKnown RBP5.26□□□□□ -1.57
YBX3-212ENST00000542002 ORMDL1Q9P0S3 153 aa5.26□□□□□ -1.57
YBX3-212ENST00000542002 A0A1B0GV72 72 aa5.25□□□□□ -1.57
YBX3-212ENST00000542002 LST1O00453 97 aa5.25□□□□□ -1.57
YBX3-212ENST00000542002 TEN1Q86WV5 123 aa5.25□□□□□ -1.57
YBX3-212ENST00000542002 TMEM256-PLSCR3K7ERE1 68 aa5.24□□□□□ -1.57
YBX3-212ENST00000542002 DNAL4O96015 105 aa5.24□□□□□ -1.57
YBX3-212ENST00000542002 TRACP01848 142 aa5.24□□□□□ -1.57
YBX3-212ENST00000542002 PCOTHQ58A44 107 aa5.24□□□□□ -1.57
YBX3-212ENST00000542002 A0A087WSZ3 146 aa5.23□□□□□ -1.57
YBX3-212ENST00000542002 M0R143 59 aa5.23□□□□□ -1.57
YBX3-212ENST00000542002 GHRHP01286 108 aa5.23□□□□□ -1.57
YBX3-212ENST00000542002 Q96NJ1 140 aa5.23□□□□□ -1.57
YBX3-212ENST00000542002 ANKRD29Q8N6D5 301 aa5.22□□□□□ -1.57
YBX3-212ENST00000542002 UBE2V1Q13404 147 aa5.21□□□□□ -1.58
YBX3-212ENST00000542002 TSTD3H0UI37 97 aa5.2□□□□□ -1.58
YBX3-212ENST00000542002 H3BQ85 93 aa5.2□□□□□ -1.58
YBX3-212ENST00000542002 BAALC-AS2P0C853 105 aa5.2□□□□□ -1.58
YBX3-212ENST00000542002 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
YBX3-212ENST00000542002 A0A0U1RQV1 116 aa5.19□□□□□ -1.58
YBX3-212ENST00000542002 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
YBX3-212ENST00000542002 BATFQ16520 125 aa5.19□□□□□ -1.58
YBX3-212ENST00000542002 OBSCN-AS1Q96MR7 158 aa5.19□□□□□ -1.58
YBX3-212ENST00000542002 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
YBX3-212ENST00000542002 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
YBX3-212ENST00000542002 SS18L2Q9UHA2 77 aa5.18□□□□□ -1.58
YBX3-212ENST00000542002 CCKP06307 115 aa5.17□□□□□ -1.58
YBX3-212ENST00000542002 RBM3P98179 157 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms