RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 NIPBLQ6KC79 2804 aaeCLIP-0.28□□□□□ -2.45
C12orf56-204ENST00000541802 NCOA2Q15596 1464 aa-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 CEP295Q9C0D2 2601 aa-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 H0YGG7 62 aa-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 KRTAP20-2Q3LI61 65 aa-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 KRTAP19-7Q3SYF9 63 aa-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 TMEM131LA2VDJ0 1609 aa-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 WDR87Q6ZQQ6 2873 aa-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 TLN1Q9Y490 2541 aaKnown RBP-0.29□□□□□ -2.46
C12orf56-204ENST00000541802 SUPT6HQ7KZ85 1726 aaKnown RBP-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 CICQ96RK0 1608 aaPredicted RBP-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 CFAP46Q8IYW2 2715 aa-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 NBPF19A0A087WUL8 3843 aa-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 SPRR2AP35326 72 aa-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 MT4P47944 62 aa-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 KRTAP19-6Q3LI70 58 aa-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 A0A0C4DFX4 3053 aa-0.3□□□□□ -2.46
C12orf56-204ENST00000541802 PTPN23Q9H3S7 1636 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 LAMA1P25391 3075 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 SMARCA2P51531 1590 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 UTP20O75691 2785 aaKnown RBP-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 PPLO60437 1756 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 URB2Q14146 1524 aaKnown RBP-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 UMAD1C9J7I0 102 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 IFI6P09912 130 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 C3orf79P0CE67 100 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 ADIRFQ15847 76 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 PRO3102Q9H379 93 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 ST20Q9HBF5 79 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 POLR1AO95602 1720 aaPredicted RBP-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 BOD1L1Q8NFC6 3051 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 UNC80Q8N2C7 3258 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 MYO9AB2RTY4 2548 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 DNAH9Q9NYC9 4486 aa-0.31□□□□□ -2.46
C12orf56-204ENST00000541802 DCHS1Q96JQ0 3298 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 SPG11Q96JI7 2443 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 ADAMTS12P58397 1594 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 LTN1O94822 1766 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 TLN2Q9Y4G6 2542 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 ZNF831Q5JPB2 1677 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 DNAH7Q8WXX0 4024 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 IFI27P40305 119 aaPredicted RBP-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 LINC00158P58513 81 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 S100A13Q99584 98 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 KALRNO60229 2985 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 MAP3K4Q9Y6R4 1608 aa-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.32□□□□□ -2.46
C12orf56-204ENST00000541802 DOT1LQ8TEK3 1739 aa-0.33□□□□□ -2.46
C12orf56-204ENST00000541802 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.33□□□□□ -2.46
C12orf56-204ENST00000541802 TEX15Q9BXT5 2789 aa-0.33□□□□□ -2.46
C12orf56-204ENST00000541802 AKAP9Q99996 3911 aa-0.33□□□□□ -2.46
C12orf56-204ENST00000541802 ZFHX4Q86UP3 3567 aa-0.34□□□□□ -2.46
C12orf56-204ENST00000541802 C4AP0C0L4 1744 aa-0.34□□□□□ -2.46
C12orf56-204ENST00000541802 C4BP0C0L5 1744 aa-0.34□□□□□ -2.46
C12orf56-204ENST00000541802 NWD1Q149M9 1564 aa-0.34□□□□□ -2.46
C12orf56-204ENST00000541802 DEFB121Q5J5C9 76 aa-0.34□□□□□ -2.46
C12orf56-204ENST00000541802 ZZEF1O43149 2961 aa-0.34□□□□□ -2.46
C12orf56-204ENST00000541802 SRCAPQ6ZRS2 3230 aa-0.34□□□□□ -2.46
C12orf56-204ENST00000541802 EP400Q96L91 3159 aa-0.35□□□□□ -2.46
C12orf56-204ENST00000541802 MED14O60244 1454 aa-0.35□□□□□ -2.46
C12orf56-204ENST00000541802 TIAM2Q8IVF5 1701 aa-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 DNAH6Q9C0G6 4158 aa-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 MTORP42345 2549 aa-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 A0A087WXM4 84 aa-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 H3BUT2 72 aa-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 ATP5EP2Q5VTU8 51 aa-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 DMXL1Q9Y485 3027 aa-0.35□□□□□ -2.47
C12orf56-204ENST00000541802 NDUFA4O00483 81 aa-0.36□□□□□ -2.47
C12orf56-204ENST00000541802 SMIM13P0DJ93 91 aa-0.36□□□□□ -2.47
C12orf56-204ENST00000541802 SPRR2EP22531 72 aa-0.36□□□□□ -2.47
C12orf56-204ENST00000541802 DEFA5Q01523 94 aa-0.36□□□□□ -2.47
C12orf56-204ENST00000541802 NREPQ16612 68 aa-0.36□□□□□ -2.47
C12orf56-204ENST00000541802 CSMD1Q96PZ7 3565 aa-0.36□□□□□ -2.47
C12orf56-204ENST00000541802 ITPR2Q14571 2701 aa-0.36□□□□□ -2.47
C12orf56-204ENST00000541802 HTTP42858 3142 aa-0.37□□□□□ -2.47
C12orf56-204ENST00000541802 MAGI3Q5TCQ9 1506 aa-0.37□□□□□ -2.47
C12orf56-204ENST00000541802 PIK3C2BO00750 1634 aa-0.37□□□□□ -2.47
C12orf56-204ENST00000541802 LCE6AA0A183 80 aa-0.37□□□□□ -2.47
C12orf56-204ENST00000541802 BVES-AS1Q5T3Y7 98 aa-0.37□□□□□ -2.47
C12orf56-204ENST00000541802 RB1CC1Q8TDY2 1594 aa-0.37□□□□□ -2.47
C12orf56-204ENST00000541802 ARFGEF2Q9Y6D5 1785 aa-0.37□□□□□ -2.47
C12orf56-204ENST00000541802 CUBNO60494 3623 aa-0.38□□□□□ -2.47
C12orf56-204ENST00000541802 NESP48681 1621 aa-0.38□□□□□ -2.47
C12orf56-204ENST00000541802 H0YAA0 97 aa-0.38□□□□□ -2.47
C12orf56-204ENST00000541802 CCDC18Q5T9S5 1454 aa-0.38□□□□□ -2.47
C12orf56-204ENST00000541802 DIP2BQ9P265 1576 aa-0.38□□□□□ -2.47
C12orf56-204ENST00000541802 DNAH3Q8TD57 4116 aa-0.38□□□□□ -2.47
C12orf56-204ENST00000541802 DNAH1Q9P2D7 4330 aa-0.39□□□□□ -2.47
C12orf56-204ENST00000541802 VPS13BQ7Z7G8 4022 aa-0.39□□□□□ -2.47
C12orf56-204ENST00000541802 WIZO95785 1651 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 PLXNC1O60486 1568 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 NBEAQ8NFP9 2946 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 CCDC88BA6NC98 1476 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 ERVK-7P63135 1459 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 H3BNG1 76 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 KRTAP19-8Q3LI54 63 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 EYSQ5T1H1 3165 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 VPS13DQ5THJ4 4388 aa-0.4□□□□□ -2.47
C12orf56-204ENST00000541802 SCN11AQ9UI33 1791 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms