RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 MAST4O15021 2626 aa3.12□□□□□ -1.91
SNHG1-218ENST00000541615 IGSF10Q6WRI0 2623 aa3.12□□□□□ -1.91
SNHG1-218ENST00000541615 ZFYVE26Q68DK2 2539 aa3.12□□□□□ -1.91
SNHG1-218ENST00000541615 PIEZO2Q9H5I5 2752 aa3.12□□□□□ -1.91
SNHG1-218ENST00000541615 SPEGQ15772 3267 aa3.11□□□□□ -1.91
SNHG1-218ENST00000541615 SPTBN1Q01082 2364 aaKnown RBP3.11□□□□□ -1.91
SNHG1-218ENST00000541615 ITPR1Q14643 2758 aa3.11□□□□□ -1.91
SNHG1-218ENST00000541615 A0A087WTM6 91 aa3.11□□□□□ -1.91
SNHG1-218ENST00000541615 RPL37AP61513 92 aaKnown RBP3.11□□□□□ -1.91
SNHG1-218ENST00000541615 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
SNHG1-218ENST00000541615 MRPL34Q9BQ48 92 aaKnown RBP3.11□□□□□ -1.91
SNHG1-218ENST00000541615 AKAP13Q12802 2813 aa3.11□□□□□ -1.91
SNHG1-218ENST00000541615 AHCTF1Q8WYP5 2266 aa3.1□□□□□ -1.91
SNHG1-218ENST00000541615 MYO18BQ8IUG5 2567 aa3.09□□□□□ -1.91
SNHG1-218ENST00000541615 KALRNO60229 2985 aa3.09□□□□□ -1.91
SNHG1-218ENST00000541615 COL6A6A6NMZ7 2263 aa3.09□□□□□ -1.91
SNHG1-218ENST00000541615 LYNX1P0DP58 116 aa3.09□□□□□ -1.91
SNHG1-218ENST00000541615 LELP1Q5T871 98 aa3.09□□□□□ -1.91
SNHG1-218ENST00000541615 SSBP3-AS1Q7Z2R9 100 aa3.09□□□□□ -1.91
SNHG1-218ENST00000541615 C15orf56Q8N910 161 aa3.09□□□□□ -1.91
SNHG1-218ENST00000541615 WNK1Q9H4A3 2382 aa3.09□□□□□ -1.92
SNHG1-218ENST00000541615 USP9XQ93008 2570 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-218ENST00000541615 LAMA5O15230 3695 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 IGF2RP11717 2491 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 A0A1B0GVX0 72 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 A0A1W2PNU3 283 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-218ENST00000541615 SPRR1BP22528 89 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 DEFB124Q8NES8 71 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 CIRBP-AS1Q8TBR5 109 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 WDFY3Q8IZQ1 3526 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 SPTA1P02549 2419 aa3.08□□□□□ -1.92
SNHG1-218ENST00000541615 TENM4Q6N022 2769 aa3.07□□□□□ -1.92
SNHG1-218ENST00000541615 LOC400499M0QZD8 3231 aa3.07□□□□□ -1.92
SNHG1-218ENST00000541615 PANO1I0J062 215 aa3.07□□□□□ -1.92
SNHG1-218ENST00000541615 LY6EQ16553 131 aa3.07□□□□□ -1.92
SNHG1-218ENST00000541615 ZNF462Q96JM2 2506 aa3.07□□□□□ -1.92
SNHG1-218ENST00000541615 FREM2Q5SZK8 3169 aa3.06□□□□□ -1.92
SNHG1-218ENST00000541615 COX6B2Q6YFQ2 88 aa3.06□□□□□ -1.92
SNHG1-218ENST00000541615 Q96NJ1 140 aa3.06□□□□□ -1.92
SNHG1-218ENST00000541615 ALMS1Q8TCU4 4167 aa3.05□□□□□ -1.92
SNHG1-218ENST00000541615 UNC79Q9P2D8 2635 aa3.05□□□□□ -1.92
SNHG1-218ENST00000541615 BRD3OSQ6XYD6 125 aa3.05□□□□□ -1.92
SNHG1-218ENST00000541615 SMG1Q96Q15 3661 aaKnown RBP3.05□□□□□ -1.92
SNHG1-218ENST00000541615 CREBBPQ92793 2442 aa3.04□□□□□ -1.92
SNHG1-218ENST00000541615 CFAP46Q8IYW2 2715 aa3.04□□□□□ -1.92
SNHG1-218ENST00000541615 COL12A1Q99715 3063 aa3.04□□□□□ -1.92
SNHG1-218ENST00000541615 APC2O95996 2303 aa3.03□□□□□ -1.92
SNHG1-218ENST00000541615 TEX15Q9BXT5 2789 aa3.03□□□□□ -1.92
SNHG1-218ENST00000541615 ATMQ13315 3056 aa3.03□□□□□ -1.92
SNHG1-218ENST00000541615 NBDYA0A0U1RRE5 68 aa3.03□□□□□ -1.92
SNHG1-218ENST00000541615 ANKRD17O75179 2603 aaKnown RBP3.02□□□□□ -1.93
SNHG1-218ENST00000541615 A0A0G2JQZ4 141 aa3.02□□□□□ -1.93
SNHG1-218ENST00000541615 A0A1B0GU33 70 aa3.02□□□□□ -1.93
SNHG1-218ENST00000541615 MGAQ8IWI9 3026 aa3.02□□□□□ -1.93
SNHG1-218ENST00000541615 DEFB130BP0DP73 79 aa3.01□□□□□ -1.93
SNHG1-218ENST00000541615 DEFB130AP0DP74 79 aa3.01□□□□□ -1.93
SNHG1-218ENST00000541615 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
SNHG1-218ENST00000541615 CRIPTQ9P021 101 aa3.01□□□□□ -1.93
SNHG1-218ENST00000541615 SPTAN1Q13813 2472 aaKnown RBP3.01□□□□□ -1.93
SNHG1-218ENST00000541615 HECTD1Q9ULT8 2610 aa3.01□□□□□ -1.93
SNHG1-218ENST00000541615 A0A1W2PNN7 141 aa3□□□□□ -1.93
SNHG1-218ENST00000541615 PSORS1C2Q9UIG4 136 aa3□□□□□ -1.93
SNHG1-218ENST00000541615 DOPEY1Q5JWR5 2465 aa3□□□□□ -1.93
SNHG1-218ENST00000541615 TEP1Q99973 2627 aaKnown RBP3□□□□□ -1.93
SNHG1-218ENST00000541615 PTPN13Q12923 2485 aa2.99□□□□□ -1.93
SNHG1-218ENST00000541615 IGKV2-30P06310 120 aa2.99□□□□□ -1.93
SNHG1-218ENST00000541615 MYO9AB2RTY4 2548 aa2.99□□□□□ -1.93
SNHG1-218ENST00000541615 PCNX1Q96RV3 2341 aa2.99□□□□□ -1.93
SNHG1-218ENST00000541615 UBR5O95071 2799 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-218ENST00000541615 H0YAA0 97 aa2.98□□□□□ -1.93
SNHG1-218ENST00000541615 GIG44P09565 113 aaPredicted RBP2.98□□□□□ -1.93
SNHG1-218ENST00000541615 DEFB136Q30KP8 78 aa2.98□□□□□ -1.93
SNHG1-218ENST00000541615 PKDREJQ9NTG1 2253 aa2.98□□□□□ -1.93
SNHG1-218ENST00000541615 FLNCQ14315 2725 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 IGKV2D-30A0A075B6S6 120 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 H3BNG1 76 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 KRTAP21-3Q3LHN1 58 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 H1FX-AS1Q4G0G2 97 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 CRYBG3Q68DQ2 2970 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 Q6ZSA8 131 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 CENPEQ02224 2701 aa2.97□□□□□ -1.93
SNHG1-218ENST00000541615 CELSR3Q9NYQ7 3312 aa2.96□□□□□ -1.93
SNHG1-218ENST00000541615 RP1L1Q8IWN7 2480 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-218ENST00000541615 ITPR2Q14571 2701 aa2.96□□□□□ -1.94
SNHG1-218ENST00000541615 ABCA12Q86UK0 2595 aa2.96□□□□□ -1.94
SNHG1-218ENST00000541615 UTP20O75691 2785 aaKnown RBP2.95□□□□□ -1.94
SNHG1-218ENST00000541615 C2CD3Q4AC94 2353 aa2.95□□□□□ -1.94
SNHG1-218ENST00000541615 BOD1L1Q8NFC6 3051 aa2.95□□□□□ -1.94
SNHG1-218ENST00000541615 NOTCH2Q04721 2471 aa2.95□□□□□ -1.94
SNHG1-218ENST00000541615 CELSR2Q9HCU4 2923 aa2.95□□□□□ -1.94
SNHG1-218ENST00000541615 KRTAP23-1A1A580 65 aa2.95□□□□□ -1.94
SNHG1-218ENST00000541615 PRRC2CQ9Y520 2896 aaKnown RBP2.94□□□□□ -1.94
SNHG1-218ENST00000541615 A0A096LPF7 62 aa2.94□□□□□ -1.94
SNHG1-218ENST00000541615 USP9YO00507 2555 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-218ENST00000541615 POLQO75417 2590 aa2.94□□□□□ -1.94
SNHG1-218ENST00000541615 ITPR3Q14573 2671 aa2.94□□□□□ -1.94
SNHG1-218ENST00000541615 FBN2P35556 2912 aa2.93□□□□□ -1.94
SNHG1-218ENST00000541615 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
SNHG1-218ENST00000541615 KRTAP24-1Q3LI83 254 aa2.93□□□□□ -1.94
SNHG1-218ENST00000541615 LRBAP50851 2863 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms