RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 TMA7Q9Y2S6 64 aaKnown RBP12.9□□□□□ -0.34
LEMD3-203ENST00000541171 A0A0G2JQZ4 141 aa12.89□□□□□ -0.35
LEMD3-203ENST00000541171 C14orf144Q96I85 54 aa12.89□□□□□ -0.35
LEMD3-203ENST00000541171 HIGD1BQ9P298 99 aa12.89□□□□□ -0.35
LEMD3-203ENST00000541171 SMIM29Q86T20 159 aa12.88□□□□□ -0.35
LEMD3-203ENST00000541171 C1orf195Q5TG92 126 aa12.87□□□□□ -0.35
LEMD3-203ENST00000541171 PYY3Q5JQD4 70 aa12.86□□□□□ -0.35
LEMD3-203ENST00000541171 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
LEMD3-203ENST00000541171 Q5XG85 94 aa12.84□□□□□ -0.35
LEMD3-203ENST00000541171 KRTAP10-6P60371 365 aaPredicted RBP12.83□□□□□ -0.36
LEMD3-203ENST00000541171 M0R2T5 61 aa12.82□□□□□ -0.36
LEMD3-203ENST00000541171 LORP23490 312 aaPredicted RBP12.82□□□□□ -0.36
LEMD3-203ENST00000541171 C2orf91Q6ZV80 131 aa12.82□□□□□ -0.36
LEMD3-203ENST00000541171 NHP2Q9NX24 153 aaKnown RBP12.81□□□□□ -0.36
LEMD3-203ENST00000541171 RPL37P61927 97 aaKnown RBP12.8□□□□□ -0.36
LEMD3-203ENST00000541171 IGLV5-48A0A075B6I7 105 aa12.79□□□□□ -0.36
LEMD3-203ENST00000541171 VAMP3Q15836 100 aa12.78□□□□□ -0.36
LEMD3-203ENST00000541171 COX6B2Q6YFQ2 88 aa12.78□□□□□ -0.36
LEMD3-203ENST00000541171 C12orf57Q99622 126 aa12.77□□□□□ -0.37
LEMD3-203ENST00000541171 A0A0B4J2C4 111 aa12.73□□□□□ -0.37
LEMD3-203ENST00000541171 TCL1BO95988 128 aa12.72□□□□□ -0.37
LEMD3-203ENST00000541171 CFC1P0CG37 223 aa12.72□□□□□ -0.37
LEMD3-203ENST00000541171 CEND1Q8N111 149 aa12.72□□□□□ -0.37
LEMD3-203ENST00000541171 BVES-AS1Q5T3Y7 98 aa12.71□□□□□ -0.37
LEMD3-203ENST00000541171 TMEM238LA0A1B0GVL6 79 aa12.7□□□□□ -0.38
LEMD3-203ENST00000541171 A6NJY4 79 aa12.7□□□□□ -0.38
LEMD3-203ENST00000541171 LINC00575Q6W349 94 aa12.7□□□□□ -0.38
LEMD3-203ENST00000541171 RAB37Q96AX2 223 aa12.7□□□□□ -0.38
LEMD3-203ENST00000541171 F8WEM9 126 aa12.66□□□□□ -0.38
LEMD3-203ENST00000541171 hADV29S1A0JD25 119 aa12.65□□□□□ -0.38
LEMD3-203ENST00000541171 HSD52Q0P140 79 aa12.65□□□□□ -0.38
LEMD3-203ENST00000541171 FLGP20930 4061 aaPredicted RBP12.65□□□□□ -0.38
LEMD3-203ENST00000541171 UQCR10Q9UDW1 63 aa12.64□□□□□ -0.39
LEMD3-203ENST00000541171 FXYD2P54710 66 aa12.63□□□□□ -0.39
LEMD3-203ENST00000541171 Q6ZQY7 126 aa12.61□□□□□ -0.39
LEMD3-203ENST00000541171 PRO1854Q9UHT4 67 aa12.6□□□□□ -0.39
LEMD3-203ENST00000541171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.59□□□□□ -0.39
LEMD3-203ENST00000541171 Q6Q795 121 aa12.58□□□□□ -0.4
LEMD3-203ENST00000541171 H0YGX0 51 aa12.57□□□□□ -0.4
LEMD3-203ENST00000541171 PPDPFLQ8WWR9 84 aa12.57□□□□□ -0.4
LEMD3-203ENST00000541171 TRBV7-7A0A0K0K1E9 115 aa12.54□□□□□ -0.4
LEMD3-203ENST00000541171 SNCGO76070 127 aa12.54□□□□□ -0.4
LEMD3-203ENST00000541171 Q6JHZ5 121 aa12.54□□□□□ -0.4
LEMD3-203ENST00000541171 OBSCN-AS1Q96MR7 158 aa12.54□□□□□ -0.4
LEMD3-203ENST00000541171 IGFL1Q6UW32 110 aa12.53□□□□□ -0.4
LEMD3-203ENST00000541171 ATP11AUNQ6ZP68 121 aa12.53□□□□□ -0.4
LEMD3-203ENST00000541171 CLEC2BQ92478 149 aa12.53□□□□□ -0.4
LEMD3-203ENST00000541171 SMIM6P0DI80 62 aa12.52□□□□□ -0.41
LEMD3-203ENST00000541171 A0A1B0GX51 115 aa12.5□□□□□ -0.41
LEMD3-203ENST00000541171 OCIAD2Q56VL3 154 aa12.5□□□□□ -0.41
LEMD3-203ENST00000541171 FAM218AQ96MZ4 157 aa12.48□□□□□ -0.41
LEMD3-203ENST00000541171 TRIAP1O43715 76 aa12.47□□□□□ -0.41
LEMD3-203ENST00000541171 Q75L30 129 aa12.47□□□□□ -0.41
LEMD3-203ENST00000541171 K7ERJ3 54 aa12.46□□□□□ -0.41
LEMD3-203ENST00000541171 GHRHP01286 108 aa12.43□□□□□ -0.42
LEMD3-203ENST00000541171 SNHG12Q9BXW3 62 aa12.43□□□□□ -0.42
LEMD3-203ENST00000541171 LST1O00453 97 aa12.41□□□□□ -0.42
LEMD3-203ENST00000541171 Q96NJ1 140 aa12.41□□□□□ -0.42
LEMD3-203ENST00000541171 H3BUT2 72 aa12.39□□□□□ -0.43
LEMD3-203ENST00000541171 COX6CP09669 75 aa12.39□□□□□ -0.43
LEMD3-203ENST00000541171 PSMB2P49721 201 aa12.39□□□□□ -0.43
LEMD3-203ENST00000541171 M0R143 59 aa12.35□□□□□ -0.43
LEMD3-203ENST00000541171 DNAL4O96015 105 aa12.34□□□□□ -0.43
LEMD3-203ENST00000541171 LOC105371267A0A1B0GV96 52 aa12.32□□□□□ -0.44
LEMD3-203ENST00000541171 H3BQ85 93 aa12.32□□□□□ -0.44
LEMD3-203ENST00000541171 NDUFV3P56181 108 aaKnown RBP12.32□□□□□ -0.44
LEMD3-203ENST00000541171 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
LEMD3-203ENST00000541171 ORMDL1Q9P0S3 153 aa12.29□□□□□ -0.44
LEMD3-203ENST00000541171 FABP2P12104 132 aa12.28□□□□□ -0.44
LEMD3-203ENST00000541171 SS18L2Q9UHA2 77 aa12.28□□□□□ -0.44
LEMD3-203ENST00000541171 C20orf166-AS1Q96NR2 134 aa12.27□□□□□ -0.45
LEMD3-203ENST00000541171 USH2AO75445 5202 aa12.25□□□□□ -0.45
LEMD3-203ENST00000541171 TRACP01848 142 aa12.25□□□□□ -0.45
LEMD3-203ENST00000541171 TRBV20-1A0A075B6N2 111 aa12.24□□□□□ -0.45
LEMD3-203ENST00000541171 A8MUU9 505 aa12.24□□□□□ -0.45
LEMD3-203ENST00000541171 H3BMG7 143 aa12.24□□□□□ -0.45
LEMD3-203ENST00000541171 KRTAP9-8Q9BYQ0 159 aa12.24□□□□□ -0.45
LEMD3-203ENST00000541171 SCGB1C2P0DMR2 95 aa12.23□□□□□ -0.45
LEMD3-203ENST00000541171 SSPOA2VEC9 5147 aa12.23□□□□□ -0.45
LEMD3-203ENST00000541171 TMEM256-PLSCR3K7ERE1 68 aa12.22□□□□□ -0.45
LEMD3-203ENST00000541171 TEN1Q86WV5 123 aa12.22□□□□□ -0.45
LEMD3-203ENST00000541171 A0A087WSZ3 146 aa12.2□□□□□ -0.46
LEMD3-203ENST00000541171 DSCR10P59022 87 aa12.19□□□□□ -0.46
LEMD3-203ENST00000541171 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-203ENST00000541171 UBE2V1Q13404 147 aa12.17□□□□□ -0.46
LEMD3-203ENST00000541171 KRTAP9-7A8MTY7 169 aa12.15□□□□□ -0.46
LEMD3-203ENST00000541171 ANKRD29Q8N6D5 301 aa12.11□□□□□ -0.47
LEMD3-203ENST00000541171 SIGMAR1Q99720 223 aa12.11□□□□□ -0.47
LEMD3-203ENST00000541171 FAM236DA0A1B0GTK5 79 aa12.1□□□□□ -0.47
LEMD3-203ENST00000541171 A0A1W2PNM2 257 aa12.1□□□□□ -0.47
LEMD3-203ENST00000541171 FAM236CP0DP71 79 aa12.1□□□□□ -0.47
LEMD3-203ENST00000541171 ATXN8Q156A1 80 aa12.1□□□□□ -0.47
LEMD3-203ENST00000541171 LYRM7Q5U5X0 104 aa12.1□□□□□ -0.47
LEMD3-203ENST00000541171 TRBV7-4A0A0J9YYF1 115 aa12.08□□□□□ -0.48
LEMD3-203ENST00000541171 NAA38Q9BRA0 125 aaKnown RBP12.08□□□□□ -0.48
LEMD3-203ENST00000541171 KRTAP16-1A8MUX0 517 aa12.07□□□□□ -0.48
LEMD3-203ENST00000541171 BATFQ16520 125 aa12.07□□□□□ -0.48
LEMD3-203ENST00000541171 A0A1B0GV72 72 aa12.05□□□□□ -0.48
LEMD3-203ENST00000541171 MT2AP02795 61 aa12.05□□□□□ -0.48
LEMD3-203ENST00000541171 LINC00313P59037 77 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms