RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 CEND1Q8N111 149 aa8.38□□□□□ -1.07
UBE3B-212ENST00000540230 A0A0B4J2C4 111 aa8.37□□□□□ -1.07
UBE3B-212ENST00000540230 RAB37Q96AX2 223 aa8.37□□□□□ -1.07
UBE3B-212ENST00000540230 LIMD2Q9BT23 127 aa8.37□□□□□ -1.07
UBE3B-212ENST00000540230 FXYD2P54710 66 aa8.36□□□□□ -1.07
UBE3B-212ENST00000540230 CD164Q04900 197 aa8.36□□□□□ -1.07
UBE3B-212ENST00000540230 BVES-AS1Q5T3Y7 98 aa8.36□□□□□ -1.07
UBE3B-212ENST00000540230 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.33□□□□□ -1.08
UBE3B-212ENST00000540230 FAM218AQ96MZ4 157 aa8.33□□□□□ -1.08
UBE3B-212ENST00000540230 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
UBE3B-212ENST00000540230 F8WEM9 126 aa8.3□□□□□ -1.08
UBE3B-212ENST00000540230 Q5XG85 94 aa8.3□□□□□ -1.08
UBE3B-212ENST00000540230 PRO1854Q9UHT4 67 aa8.3□□□□□ -1.08
UBE3B-212ENST00000540230 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
UBE3B-212ENST00000540230 A6NJY4 79 aa8.29□□□□□ -1.08
UBE3B-212ENST00000540230 XP32Q5T750 250 aa8.29□□□□□ -1.08
UBE3B-212ENST00000540230 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
UBE3B-212ENST00000540230 IGFL1Q6UW32 110 aa8.29□□□□□ -1.08
UBE3B-212ENST00000540230 HSD52Q0P140 79 aa8.28□□□□□ -1.08
UBE3B-212ENST00000540230 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
UBE3B-212ENST00000540230 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
UBE3B-212ENST00000540230 H0YGX0 51 aa8.27□□□□□ -1.09
UBE3B-212ENST00000540230 K7ERJ3 54 aa8.27□□□□□ -1.09
UBE3B-212ENST00000540230 OCIAD2Q56VL3 154 aa8.27□□□□□ -1.09
UBE3B-212ENST00000540230 C9orf92A6NGG3 77 aa8.26□□□□□ -1.09
UBE3B-212ENST00000540230 PPDPFLQ8WWR9 84 aa8.26□□□□□ -1.09
UBE3B-212ENST00000540230 CLEC2BQ92478 149 aa8.26□□□□□ -1.09
UBE3B-212ENST00000540230 KRTAP4-1Q9BYQ7 146 aa8.26□□□□□ -1.09
UBE3B-212ENST00000540230 H3BUT2 72 aa8.25□□□□□ -1.09
UBE3B-212ENST00000540230 TRIAP1O43715 76 aa8.25□□□□□ -1.09
UBE3B-212ENST00000540230 Q6JHZ5 121 aa8.24□□□□□ -1.09
UBE3B-212ENST00000540230 SNHG12Q9BXW3 62 aa8.24□□□□□ -1.09
UBE3B-212ENST00000540230 UQCR10Q9UDW1 63 aa8.24□□□□□ -1.09
UBE3B-212ENST00000540230 TRBV7-7A0A0K0K1E9 115 aa8.22□□□□□ -1.09
UBE3B-212ENST00000540230 A0A0U1RQV1 116 aa8.21□□□□□ -1.1
UBE3B-212ENST00000540230 SEC61BP60468 96 aaKnown RBP8.21□□□□□ -1.1
UBE3B-212ENST00000540230 TCL1BO95988 128 aa8.2□□□□□ -1.1
UBE3B-212ENST00000540230 A0A1B0GX51 115 aa8.19□□□□□ -1.1
UBE3B-212ENST00000540230 SNCGO76070 127 aa8.19□□□□□ -1.1
UBE3B-212ENST00000540230 NDUFV3P56181 108 aaKnown RBP8.19□□□□□ -1.1
UBE3B-212ENST00000540230 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
UBE3B-212ENST00000540230 PSMB2P49721 201 aa8.17□□□□□ -1.1
UBE3B-212ENST00000540230 FABP2P12104 132 aa8.15□□□□□ -1.1
UBE3B-212ENST00000540230 H3BMG7 143 aa8.13□□□□□ -1.11
UBE3B-212ENST00000540230 PCOTHQ58A44 107 aa8.13□□□□□ -1.11
UBE3B-212ENST00000540230 Q6Q795 121 aa8.12□□□□□ -1.11
UBE3B-212ENST00000540230 DNAL4O96015 105 aa8.11□□□□□ -1.11
UBE3B-212ENST00000540230 A0A1B0GV72 72 aa8.1□□□□□ -1.11
UBE3B-212ENST00000540230 COX6CP09669 75 aa8.1□□□□□ -1.11
UBE3B-212ENST00000540230 TEN1Q86WV5 123 aa8.1□□□□□ -1.11
UBE3B-212ENST00000540230 ORMDL1Q9P0S3 153 aa8.1□□□□□ -1.11
UBE3B-212ENST00000540230 GHRHP01286 108 aa8.09□□□□□ -1.11
UBE3B-212ENST00000540230 A0A087WSZ3 146 aa8.08□□□□□ -1.12
UBE3B-212ENST00000540230 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
UBE3B-212ENST00000540230 SMIM6P0DI80 62 aa8.08□□□□□ -1.12
UBE3B-212ENST00000540230 LST1O00453 97 aa8.08□□□□□ -1.12
UBE3B-212ENST00000540230 RPL37P61927 97 aaKnown RBP8.08□□□□□ -1.12
UBE3B-212ENST00000540230 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
UBE3B-212ENST00000540230 Q96NJ1 140 aa8.05□□□□□ -1.12
UBE3B-212ENST00000540230 SS18L2Q9UHA2 77 aa8.05□□□□□ -1.12
UBE3B-212ENST00000540230 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
UBE3B-212ENST00000540230 TRACP01848 142 aa8.04□□□□□ -1.12
UBE3B-212ENST00000540230 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
UBE3B-212ENST00000540230 OBSCN-AS1Q96MR7 158 aa8.03□□□□□ -1.12
UBE3B-212ENST00000540230 NAA38Q9BRA0 125 aaKnown RBP8.03□□□□□ -1.12
UBE3B-212ENST00000540230 ANKRD29Q8N6D5 301 aa8.03□□□□□ -1.12
UBE3B-212ENST00000540230 H3BQ85 93 aa8.02□□□□□ -1.13
UBE3B-212ENST00000540230 M0R143 59 aa8.02□□□□□ -1.13
UBE3B-212ENST00000540230 KRTAP19-2Q3LHN2 52 aa8.02□□□□□ -1.13
UBE3B-212ENST00000540230 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
UBE3B-212ENST00000540230 UBE2V1Q13404 147 aa8.01□□□□□ -1.13
UBE3B-212ENST00000540230 TRBV7-4A0A0J9YYF1 115 aa7.98□□□□□ -1.13
UBE3B-212ENST00000540230 CCKP06307 115 aa7.97□□□□□ -1.13
UBE3B-212ENST00000540230 TSTD3H0UI37 97 aa7.95□□□□□ -1.14
UBE3B-212ENST00000540230 BAALC-AS2P0C853 105 aa7.95□□□□□ -1.14
UBE3B-212ENST00000540230 Q75L30 129 aa7.95□□□□□ -1.14
UBE3B-212ENST00000540230 SIGMAR1Q99720 223 aa7.94□□□□□ -1.14
UBE3B-212ENST00000540230 DSCR10P59022 87 aa7.93□□□□□ -1.14
UBE3B-212ENST00000540230 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
UBE3B-212ENST00000540230 BATFQ16520 125 aa7.93□□□□□ -1.14
UBE3B-212ENST00000540230 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
UBE3B-212ENST00000540230 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
UBE3B-212ENST00000540230 IGKV4-1P06312 121 aa7.92□□□□□ -1.14
UBE3B-212ENST00000540230 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
UBE3B-212ENST00000540230 LINC00472Q9H8W2 130 aa7.91□□□□□ -1.14
UBE3B-212ENST00000540230 C20orf166-AS1Q96NR2 134 aa7.9□□□□□ -1.14
UBE3B-212ENST00000540230 DSCR8Q96T75 97 aa7.9□□□□□ -1.14
UBE3B-212ENST00000540230 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
UBE3B-212ENST00000540230 A8MUU9 505 aa7.88□□□□□ -1.15
UBE3B-212ENST00000540230 MT1HP80294 61 aa7.88□□□□□ -1.15
UBE3B-212ENST00000540230 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
UBE3B-212ENST00000540230 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
UBE3B-212ENST00000540230 FLGP20930 4061 aaPredicted RBP7.87□□□□□ -1.15
UBE3B-212ENST00000540230 KRTAP9-2Q9BYQ4 174 aa7.87□□□□□ -1.15
UBE3B-212ENST00000540230 KRTAP16-1A8MUX0 517 aa7.86□□□□□ -1.15
UBE3B-212ENST00000540230 C9JAW5 83 aa7.86□□□□□ -1.15
UBE3B-212ENST00000540230 LINC00313P59037 77 aa7.84□□□□□ -1.15
UBE3B-212ENST00000540230 TAX1BP3O14907 124 aa7.83□□□□□ -1.16
UBE3B-212ENST00000540230 Q6ZQT0 140 aa7.83□□□□□ -1.16
UBE3B-212ENST00000540230 LYRM7Q5U5X0 104 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms