RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 KRTAP11-1Q8IUC1 163 aa12.63□□□□□ -0.39
PACSIN3-211ENST00000539589 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.63□□□□□ -0.39
PACSIN3-211ENST00000539589 H0Y9J4 135 aa12.62□□□□□ -0.39
PACSIN3-211ENST00000539589 IGLV5-52A0A0A0MRZ9 124 aa12.61□□□□□ -0.39
PACSIN3-211ENST00000539589 LCE6AA0A183 80 aa12.61□□□□□ -0.39
PACSIN3-211ENST00000539589 UQCRQO14949 82 aa12.61□□□□□ -0.39
PACSIN3-211ENST00000539589 NREPQ16612 68 aa12.61□□□□□ -0.39
PACSIN3-211ENST00000539589 SMIM29Q86T20 159 aa12.61□□□□□ -0.39
PACSIN3-211ENST00000539589 F8WEM9 126 aa12.6□□□□□ -0.39
PACSIN3-211ENST00000539589 KRTAP10-2P60368 255 aa12.6□□□□□ -0.39
PACSIN3-211ENST00000539589 SPACA4Q8TDM5 124 aa12.6□□□□□ -0.39
PACSIN3-211ENST00000539589 A0A1W2PNM2 257 aa12.59□□□□□ -0.39
PACSIN3-211ENST00000539589 EPM2AB3EWF7 344 aa12.59□□□□□ -0.39
PACSIN3-211ENST00000539589 COX7CP15954 63 aa12.59□□□□□ -0.39
PACSIN3-211ENST00000539589 Q8NBF4 154 aa12.58□□□□□ -0.4
PACSIN3-211ENST00000539589 UBE2AP49459 152 aa12.56□□□□□ -0.4
PACSIN3-211ENST00000539589 SCXQ7RTU7 201 aa12.56□□□□□ -0.4
PACSIN3-211ENST00000539589 SERP2Q8N6R1 65 aa12.55□□□□□ -0.4
PACSIN3-211ENST00000539589 BCE1O60756 84 aa12.54□□□□□ -0.4
PACSIN3-211ENST00000539589 SPRR4Q96PI1 79 aa12.54□□□□□ -0.4
PACSIN3-211ENST00000539589 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
PACSIN3-211ENST00000539589 PKHD1P08F94 4074 aa12.52□□□□□ -0.41
PACSIN3-211ENST00000539589 IGLV8-61A0A075B6I0 122 aa12.5□□□□□ -0.41
PACSIN3-211ENST00000539589 BPY2O14599 106 aa12.5□□□□□ -0.41
PACSIN3-211ENST00000539589 SPRR1BP22528 89 aa12.49□□□□□ -0.41
PACSIN3-211ENST00000539589 CRYGAP11844 174 aa12.49□□□□□ -0.41
PACSIN3-211ENST00000539589 LRP1BQ9NZR2 4599 aa12.48□□□□□ -0.41
PACSIN3-211ENST00000539589 IGFL1Q6UW32 110 aa12.48□□□□□ -0.41
PACSIN3-211ENST00000539589 KRTAP13-1Q8IUC0 172 aa12.47□□□□□ -0.41
PACSIN3-211ENST00000539589 PLAC8Q9NZF1 115 aa12.46□□□□□ -0.41
PACSIN3-211ENST00000539589 DYNC1H1Q14204 4646 aaKnown RBP12.46□□□□□ -0.42
PACSIN3-211ENST00000539589 FAM30AQ9NZY2 134 aa12.45□□□□□ -0.42
PACSIN3-211ENST00000539589 SS18L2Q9UHA2 77 aa12.43□□□□□ -0.42
PACSIN3-211ENST00000539589 IGKV4-1P06312 121 aa12.42□□□□□ -0.42
PACSIN3-211ENST00000539589 KRTAP10-1P60331 282 aa12.42□□□□□ -0.42
PACSIN3-211ENST00000539589 SMIM20Q8N5G0 67 aa12.42□□□□□ -0.42
PACSIN3-211ENST00000539589 Q8N9L7 120 aa12.42□□□□□ -0.42
PACSIN3-211ENST00000539589 A0A0G2JQZ4 141 aa12.42□□□□□ -0.42
PACSIN3-211ENST00000539589 SRRM2Q9UQ35 2752 aaKnown RBP12.4□□□□□ -0.42
PACSIN3-211ENST00000539589 RYR3Q15413 4870 aa12.4□□□□□ -0.42
PACSIN3-211ENST00000539589 TRAV7A0A075B6U4 112 aa12.38□□□□□ -0.43
PACSIN3-211ENST00000539589 Q6ZSA8 131 aa12.37□□□□□ -0.43
PACSIN3-211ENST00000539589 LINC00336Q6ZUF6 198 aa12.35□□□□□ -0.43
PACSIN3-211ENST00000539589 PSORS1C2Q9UIG4 136 aa12.35□□□□□ -0.43
PACSIN3-211ENST00000539589 CIRBP-AS1Q8TBR5 109 aa12.35□□□□□ -0.43
PACSIN3-211ENST00000539589 A0A087WSZ3 146 aa12.33□□□□□ -0.43
PACSIN3-211ENST00000539589 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
PACSIN3-211ENST00000539589 DSCR10P59022 87 aa12.31□□□□□ -0.44
PACSIN3-211ENST00000539589 ZNF706Q9Y5V0 76 aaPredicted RBP12.31□□□□□ -0.44
PACSIN3-211ENST00000539589 APOBP04114 4563 aaKnown RBP12.3□□□□□ -0.44
PACSIN3-211ENST00000539589 CYSTM1Q9H1C7 97 aa12.29□□□□□ -0.44
PACSIN3-211ENST00000539589 LINC00483Q53H64 154 aa12.28□□□□□ -0.44
PACSIN3-211ENST00000539589 ZNF861PO60384 105 aa12.28□□□□□ -0.44
PACSIN3-211ENST00000539589 C20orf197Q8N268 126 aa12.27□□□□□ -0.44
PACSIN3-211ENST00000539589 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
PACSIN3-211ENST00000539589 K7EQZ3 153 aa12.25□□□□□ -0.45
PACSIN3-211ENST00000539589 IGLV9-49A0A0B4J1Y8 123 aa12.23□□□□□ -0.45
PACSIN3-211ENST00000539589 RPL37AP61513 92 aaKnown RBP12.21□□□□□ -0.45
PACSIN3-211ENST00000539589 DEFB116Q30KQ4 102 aa12.21□□□□□ -0.45
PACSIN3-211ENST00000539589 TMEM258P61165 79 aa12.2□□□□□ -0.46
PACSIN3-211ENST00000539589 OCR1Q9BZK8 76 aa12.2□□□□□ -0.46
PACSIN3-211ENST00000539589 IGLV7-43P04211 117 aa12.18□□□□□ -0.46
PACSIN3-211ENST00000539589 KLKP1Q107X0 134 aa12.18□□□□□ -0.46
PACSIN3-211ENST00000539589 LINC00472Q9H8W2 130 aa12.16□□□□□ -0.46
PACSIN3-211ENST00000539589 FAT1Q14517 4588 aa12.16□□□□□ -0.46
PACSIN3-211ENST00000539589 HCG22E2RYF7 251 aa12.15□□□□□ -0.46
PACSIN3-211ENST00000539589 SNURFQ9Y675 71 aa12.13□□□□□ -0.47
PACSIN3-211ENST00000539589 MOBPQ13875 183 aa12.12□□□□□ -0.47
PACSIN3-211ENST00000539589 ANAPC11Q9NYG5 84 aa12.11□□□□□ -0.47
PACSIN3-211ENST00000539589 TMEM254Q8TBM7 123 aa12.11□□□□□ -0.47
PACSIN3-211ENST00000539589 A8MWP4 228 aa12.1□□□□□ -0.47
PACSIN3-211ENST00000539589 J3KT08 172 aa12.09□□□□□ -0.47
PACSIN3-211ENST00000539589 H7BZZ5 65 aa12.08□□□□□ -0.48
PACSIN3-211ENST00000539589 PRR15Q8IV56 129 aa12.08□□□□□ -0.48
PACSIN3-211ENST00000539589 NDUFC1O43677 76 aa12.07□□□□□ -0.48
PACSIN3-211ENST00000539589 HRCT1Q6UXD1 115 aa12.06□□□□□ -0.48
PACSIN3-211ENST00000539589 WFDC13Q8IUB5 93 aa12.04□□□□□ -0.48
PACSIN3-211ENST00000539589 A0A0U1RQV1 116 aa12.02□□□□□ -0.49
PACSIN3-211ENST00000539589 NDUFB1O75438 58 aa12.01□□□□□ -0.49
PACSIN3-211ENST00000539589 KRTAP29-1A8MX34 341 aaPredicted RBP12.01□□□□□ -0.49
PACSIN3-211ENST00000539589 Q96NJ1 140 aa12.01□□□□□ -0.49
PACSIN3-211ENST00000539589 RPS28P62857 69 aaKnown RBP12□□□□□ -0.49
PACSIN3-211ENST00000539589 FAM236DA0A1B0GTK5 79 aa11.99□□□□□ -0.49
PACSIN3-211ENST00000539589 FAM236CP0DP71 79 aa11.99□□□□□ -0.49
PACSIN3-211ENST00000539589 CASC2Q6XLA1 102 aa11.99□□□□□ -0.49
PACSIN3-211ENST00000539589 HSPG2P98160 4391 aa11.99□□□□□ -0.49
PACSIN3-211ENST00000539589 SMR3BP02814 79 aaPredicted RBP11.99□□□□□ -0.49
PACSIN3-211ENST00000539589 C5orf47Q569G3 176 aa11.97□□□□□ -0.49
PACSIN3-211ENST00000539589 SSBP3-AS1Q7Z2R9 100 aa11.94□□□□□ -0.5
PACSIN3-211ENST00000539589 EPPK1P58107 5090 aaKnown RBP11.94□□□□□ -0.5
PACSIN3-211ENST00000539589 RYR1P21817 5038 aa11.92□□□□□ -0.5
PACSIN3-211ENST00000539589 CD164Q04900 197 aa11.92□□□□□ -0.5
PACSIN3-211ENST00000539589 MMP24-AS1A0A0U1RRL7 71 aa11.91□□□□□ -0.5
PACSIN3-211ENST00000539589 CDK2AP2O75956 126 aa11.9□□□□□ -0.5
PACSIN3-211ENST00000539589 ATP5EP56381 51 aaPredicted RBP11.89□□□□□ -0.51
PACSIN3-211ENST00000539589 PKHD1L1Q86WI1 4243 aa11.88□□□□□ -0.51
PACSIN3-211ENST00000539589 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
PACSIN3-211ENST00000539589 hDV103S1A0JD37 113 aa11.87□□□□□ -0.51
PACSIN3-211ENST00000539589 KRTAP1-4P0C5Y4 121 aa11.86□□□□□ -0.51
PACSIN3-211ENST00000539589 MP68P56378 58 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms