RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 SPANXDQ9BXN6 97 aa3□□□□□ -1.93
SSPN-206ENST00000539019 SPANXCQ9NY87 97 aa3□□□□□ -1.93
SSPN-206ENST00000539019 PKIGQ9Y2B9 76 aa3□□□□□ -1.93
SSPN-206ENST00000539019 ZNF815PA8K554 130 aa3□□□□□ -1.93
SSPN-206ENST00000539019 NDUFC2O95298 119 aa3□□□□□ -1.93
SSPN-206ENST00000539019 LGALS3P17931 250 aaKnown RBP3□□□□□ -1.93
SSPN-206ENST00000539019 LINC00158P58513 81 aa3□□□□□ -1.93
SSPN-206ENST00000539019 TAL2Q16559 108 aa3□□□□□ -1.93
SSPN-206ENST00000539019 MRPL55Q7Z7F7 128 aaKnown RBP3□□□□□ -1.93
SSPN-206ENST00000539019 LINC00337Q8N6G1 96 aa3□□□□□ -1.93
SSPN-206ENST00000539019 KCNQ1DNQ9H478 68 aa3□□□□□ -1.93
SSPN-206ENST00000539019 SPANXB1Q9NS25 103 aaPredicted RBP3□□□□□ -1.93
SSPN-206ENST00000539019 TRBV10-2A0A0K0K1G8 114 aa2.99□□□□□ -1.93
SSPN-206ENST00000539019 TAX1BP3O14907 124 aa2.99□□□□□ -1.93
SSPN-206ENST00000539019 RPL37AP61513 92 aaKnown RBP2.99□□□□□ -1.93
SSPN-206ENST00000539019 LPAP08519 4548 aa2.98□□□□□ -1.93
SSPN-206ENST00000539019 TRBV10-3A0A0K0K1G6 114 aa2.98□□□□□ -1.93
SSPN-206ENST00000539019 TMEM238C9JI98 176 aa2.98□□□□□ -1.93
SSPN-206ENST00000539019 IGLV7-43P04211 117 aa2.98□□□□□ -1.93
SSPN-206ENST00000539019 VAMP3Q15836 100 aa2.98□□□□□ -1.93
SSPN-206ENST00000539019 MEIG1Q5JSS6 88 aa2.98□□□□□ -1.93
SSPN-206ENST00000539019 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
SSPN-206ENST00000539019 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 ZNF861PO60384 105 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 BCE1O60756 84 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 INAFM2P0DMQ5 153 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 GTF2H5Q6ZYL4 71 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 MUSTN1Q8IVN3 82 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 CEND1Q8N111 149 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 TMEM126AQ9H061 195 aa2.97□□□□□ -1.93
SSPN-206ENST00000539019 IFITM1P13164 125 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 NPC2P61916 151 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 C1orf137Q5JT78 98 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 SPINK6Q6UWN8 80 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 SMCR5Q8TEV8 140 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 LINC01600Q96MT4 127 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 Q9BRP9 147 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
SSPN-206ENST00000539019 K7EP34 96 aa2.95□□□□□ -1.94
SSPN-206ENST00000539019 NCR3O14931 201 aa2.95□□□□□ -1.94
SSPN-206ENST00000539019 ERC2-IT1O76042 136 aa2.95□□□□□ -1.94
SSPN-206ENST00000539019 FABP2P12104 132 aa2.95□□□□□ -1.94
SSPN-206ENST00000539019 SCGB1D4Q6XE38 83 aa2.95□□□□□ -1.94
SSPN-206ENST00000539019 DPH3Q96FX2 82 aa2.95□□□□□ -1.94
SSPN-206ENST00000539019 A0A1B0GWB2 263 aa2.94□□□□□ -1.94
SSPN-206ENST00000539019 A0A1W2PPM0 123 aa2.94□□□□□ -1.94
SSPN-206ENST00000539019 H3BUT2 72 aa2.94□□□□□ -1.94
SSPN-206ENST00000539019 FXYD2P54710 66 aa2.94□□□□□ -1.94
SSPN-206ENST00000539019 OXTP01178 125 aa2.93□□□□□ -1.94
SSPN-206ENST00000539019 CXCL6P80162 114 aa2.93□□□□□ -1.94
SSPN-206ENST00000539019 PRLHP81277 87 aa2.93□□□□□ -1.94
SSPN-206ENST00000539019 KRTAP13-2Q52LG2 175 aa2.93□□□□□ -1.94
SSPN-206ENST00000539019 NKAPP1Q8N9T2 125 aa2.93□□□□□ -1.94
SSPN-206ENST00000539019 RAB37Q96AX2 223 aa2.93□□□□□ -1.94
SSPN-206ENST00000539019 NHP2Q9NX24 153 aaKnown RBP2.93□□□□□ -1.94
SSPN-206ENST00000539019 SPCS1Q9Y6A9 102 aa2.93□□□□□ -1.94
SSPN-206ENST00000539019 ZNF73O43830 326 aaPredicted RBP2.92□□□□□ -1.94
SSPN-206ENST00000539019 ELOF1P60002 83 aaKnown RBP2.92□□□□□ -1.94
SSPN-206ENST00000539019 UBE2BP63146 152 aa2.92□□□□□ -1.94
SSPN-206ENST00000539019 LINC00483Q53H64 154 aa2.92□□□□□ -1.94
SSPN-206ENST00000539019 LYRM7Q5U5X0 104 aa2.92□□□□□ -1.94
SSPN-206ENST00000539019 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
SSPN-206ENST00000539019 TRAV23DV6A0A075B6W5 121 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 TRBV7-6A0A0J9YX20 115 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 K7ERJ3 54 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 K7ERU9 68 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 SPRR1BP22528 89 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 Q6ZRX8 168 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 SMIM11BQ8TCY0 68 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 SPRR4Q96PI1 79 aa2.91□□□□□ -1.94
SSPN-206ENST00000539019 A0A0B4J2C4 111 aa2.9□□□□□ -1.94
SSPN-206ENST00000539019 F8W1H4 67 aa2.9□□□□□ -1.94
SSPN-206ENST00000539019 RPL28P46779 137 aaKnown RBP2.9□□□□□ -1.94
SSPN-206ENST00000539019 C6orf99Q4VX62 202 aa2.9□□□□□ -1.94
SSPN-206ENST00000539019 COPS9Q8WXC6 57 aa2.9□□□□□ -1.94
SSPN-206ENST00000539019 DIRC1Q969H9 104 aa2.9□□□□□ -1.94
SSPN-206ENST00000539019 CBY1Q9Y3M2 126 aa2.9□□□□□ -1.94
SSPN-206ENST00000539019 RNF213Q63HN8 5207 aa2.9□□□□□ -1.95
SSPN-206ENST00000539019 IGLV5-48A0A075B6I7 105 aa2.89□□□□□ -1.95
SSPN-206ENST00000539019 TRBV20-1A0A075B6N2 111 aa2.89□□□□□ -1.95
SSPN-206ENST00000539019 OCIAD2Q56VL3 154 aa2.89□□□□□ -1.95
SSPN-206ENST00000539019 FAM19A1Q7Z5A9 133 aa2.89□□□□□ -1.95
SSPN-206ENST00000539019 ST20-AS1Q8NBB2 130 aa2.89□□□□□ -1.95
SSPN-206ENST00000539019 NAA38Q9BRA0 125 aaKnown RBP2.89□□□□□ -1.95
SSPN-206ENST00000539019 TRAV13-2A0A0B4J235 113 aa2.88□□□□□ -1.95
SSPN-206ENST00000539019 J3QR89 54 aa2.88□□□□□ -1.95
SSPN-206ENST00000539019 TSPAN13O95857 204 aa2.88□□□□□ -1.95
SSPN-206ENST00000539019 FAM229BQ4G0N7 80 aa2.88□□□□□ -1.95
SSPN-206ENST00000539019 PRO1854Q9UHT4 67 aa2.88□□□□□ -1.95
SSPN-206ENST00000539019 MUC2Q02817 5179 aa2.88□□□□□ -1.95
SSPN-206ENST00000539019 S100A7L2Q5SY68 101 aa2.87□□□□□ -1.95
SSPN-206ENST00000539019 LINC00575Q6W349 94 aa2.87□□□□□ -1.95
SSPN-206ENST00000539019 C3orf22Q8N5N4 141 aa2.87□□□□□ -1.95
SSPN-206ENST00000539019 H3BMG7 143 aa2.87□□□□□ -1.95
SSPN-206ENST00000539019 SCGB1C2P0DMR2 95 aa2.87□□□□□ -1.95
SSPN-206ENST00000539019 COX7BP24311 80 aa2.87□□□□□ -1.95
SSPN-206ENST00000539019 RPL13AP40429 203 aaKnown RBP2.87□□□□□ -1.95
SSPN-206ENST00000539019 UBE2AP49459 152 aa2.87□□□□□ -1.95
SSPN-206ENST00000539019 HIGD2AQ9BW72 106 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms