RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 IGLV5-48A0A075B6I7 105 aa6.47□□□□□ -1.37
RTN3-209ENST00000538995 CD164Q04900 197 aa6.46□□□□□ -1.38
RTN3-209ENST00000538995 SMIM11BQ8TCY0 68 aa6.46□□□□□ -1.38
RTN3-209ENST00000538995 FAT4Q6V0I7 4981 aa6.46□□□□□ -1.38
RTN3-209ENST00000538995 DEFB105AQ8NG35 78 aa6.45□□□□□ -1.38
RTN3-209ENST00000538995 KRTAP9-9Q9BYP9 154 aa6.45□□□□□ -1.38
RTN3-209ENST00000538995 KRTAP9-4Q9BYQ2 154 aa6.45□□□□□ -1.38
RTN3-209ENST00000538995 PRO1933Q9H354 126 aa6.45□□□□□ -1.38
RTN3-209ENST00000538995 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
RTN3-209ENST00000538995 Q1RN00 199 aa6.44□□□□□ -1.38
RTN3-209ENST00000538995 ASB16-AS1Q495Z4 193 aa6.44□□□□□ -1.38
RTN3-209ENST00000538995 DLEU1O43261 78 aa6.43□□□□□ -1.38
RTN3-209ENST00000538995 SCGB1D1O95968 90 aa6.43□□□□□ -1.38
RTN3-209ENST00000538995 VAMP3Q15836 100 aa6.43□□□□□ -1.38
RTN3-209ENST00000538995 SMIM29Q86T20 159 aa6.43□□□□□ -1.38
RTN3-209ENST00000538995 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
RTN3-209ENST00000538995 Q5XG85 94 aa6.42□□□□□ -1.38
RTN3-209ENST00000538995 H7C2G1 150 aa6.41□□□□□ -1.38
RTN3-209ENST00000538995 COX8AP10176 69 aa6.41□□□□□ -1.38
RTN3-209ENST00000538995 HRCT1Q6UXD1 115 aa6.41□□□□□ -1.38
RTN3-209ENST00000538995 LINC00575Q6W349 94 aa6.4□□□□□ -1.38
RTN3-209ENST00000538995 HIST1H4GQ99525 98 aa6.4□□□□□ -1.38
RTN3-209ENST00000538995 hADV29S1A0JD25 119 aa6.38□□□□□ -1.39
RTN3-209ENST00000538995 M0R143 59 aa6.38□□□□□ -1.39
RTN3-209ENST00000538995 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
RTN3-209ENST00000538995 F8WEM9 126 aa6.37□□□□□ -1.39
RTN3-209ENST00000538995 PYY3Q5JQD4 70 aa6.37□□□□□ -1.39
RTN3-209ENST00000538995 BVES-AS1Q5T3Y7 98 aa6.37□□□□□ -1.39
RTN3-209ENST00000538995 Q6ZQY7 126 aa6.36□□□□□ -1.39
RTN3-209ENST00000538995 HIGD1BQ9P298 99 aa6.36□□□□□ -1.39
RTN3-209ENST00000538995 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.35□□□□□ -1.39
RTN3-209ENST00000538995 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
RTN3-209ENST00000538995 PPDPFLQ8WWR9 84 aa6.35□□□□□ -1.39
RTN3-209ENST00000538995 IGLV8-61A0A075B6I0 122 aa6.34□□□□□ -1.39
RTN3-209ENST00000538995 SPATA45Q537H7 98 aa6.34□□□□□ -1.39
RTN3-209ENST00000538995 Q6JHZ5 121 aa6.34□□□□□ -1.39
RTN3-209ENST00000538995 VAMP8Q9BV40 100 aa6.34□□□□□ -1.39
RTN3-209ENST00000538995 PAM16Q9Y3D7 125 aa6.34□□□□□ -1.39
RTN3-209ENST00000538995 TCL1BO95988 128 aa6.33□□□□□ -1.4
RTN3-209ENST00000538995 C1orf195Q5TG92 126 aa6.33□□□□□ -1.4
RTN3-209ENST00000538995 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
RTN3-209ENST00000538995 A0A0G2JQZ4 141 aa6.32□□□□□ -1.4
RTN3-209ENST00000538995 CFC1BP0CG36 223 aa6.32□□□□□ -1.4
RTN3-209ENST00000538995 CFC1P0CG37 223 aa6.32□□□□□ -1.4
RTN3-209ENST00000538995 CLEC2BQ92478 149 aa6.32□□□□□ -1.4
RTN3-209ENST00000538995 RAB37Q96AX2 223 aa6.31□□□□□ -1.4
RTN3-209ENST00000538995 KRTAP4-1Q9BYQ7 146 aa6.31□□□□□ -1.4
RTN3-209ENST00000538995 C9orf92A6NGG3 77 aa6.3□□□□□ -1.4
RTN3-209ENST00000538995 SNCGO76070 127 aa6.3□□□□□ -1.4
RTN3-209ENST00000538995 C2orf91Q6ZV80 131 aa6.3□□□□□ -1.4
RTN3-209ENST00000538995 H0YGX0 51 aa6.29□□□□□ -1.4
RTN3-209ENST00000538995 OCIAD2Q56VL3 154 aa6.29□□□□□ -1.4
RTN3-209ENST00000538995 IGFL1Q6UW32 110 aa6.29□□□□□ -1.4
RTN3-209ENST00000538995 TRBV7-7A0A0K0K1E9 115 aa6.28□□□□□ -1.4
RTN3-209ENST00000538995 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
RTN3-209ENST00000538995 CEND1Q8N111 149 aa6.27□□□□□ -1.41
RTN3-209ENST00000538995 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
RTN3-209ENST00000538995 A0A1B0GX51 115 aa6.25□□□□□ -1.41
RTN3-209ENST00000538995 SCGB1A1P11684 91 aa6.25□□□□□ -1.41
RTN3-209ENST00000538995 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
RTN3-209ENST00000538995 PRO1854Q9UHT4 67 aa6.24□□□□□ -1.41
RTN3-209ENST00000538995 H3BUT2 72 aa6.23□□□□□ -1.41
RTN3-209ENST00000538995 FXYD2P54710 66 aa6.23□□□□□ -1.41
RTN3-209ENST00000538995 Q6Q795 121 aa6.23□□□□□ -1.41
RTN3-209ENST00000538995 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
RTN3-209ENST00000538995 RPL37P61927 97 aaKnown RBP6.22□□□□□ -1.41
RTN3-209ENST00000538995 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
RTN3-209ENST00000538995 HSD52Q0P140 79 aa6.21□□□□□ -1.42
RTN3-209ENST00000538995 UBE2V1Q13404 147 aa6.21□□□□□ -1.42
RTN3-209ENST00000538995 SS18L2Q9UHA2 77 aa6.21□□□□□ -1.42
RTN3-209ENST00000538995 MTURNQ8N3F0 131 aa6.2□□□□□ -1.42
RTN3-209ENST00000538995 VPS25Q9BRG1 176 aa6.2□□□□□ -1.42
RTN3-209ENST00000538995 K7ERU9 68 aa6.19□□□□□ -1.42
RTN3-209ENST00000538995 LST1O00453 97 aa6.19□□□□□ -1.42
RTN3-209ENST00000538995 TRIAP1O43715 76 aa6.19□□□□□ -1.42
RTN3-209ENST00000538995 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
RTN3-209ENST00000538995 A0A1B0GV72 72 aa6.18□□□□□ -1.42
RTN3-209ENST00000538995 H3BQ85 93 aa6.17□□□□□ -1.42
RTN3-209ENST00000538995 KRTAP19-2Q3LHN2 52 aa6.17□□□□□ -1.42
RTN3-209ENST00000538995 H3BMG7 143 aa6.16□□□□□ -1.42
RTN3-209ENST00000538995 FABP2P12104 132 aa6.16□□□□□ -1.42
RTN3-209ENST00000538995 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
RTN3-209ENST00000538995 UQCR10Q9UDW1 63 aa6.16□□□□□ -1.42
RTN3-209ENST00000538995 DNAL4O96015 105 aa6.15□□□□□ -1.42
RTN3-209ENST00000538995 COX6CP09669 75 aa6.15□□□□□ -1.42
RTN3-209ENST00000538995 K7ERJ3 54 aa6.14□□□□□ -1.43
RTN3-209ENST00000538995 PSMB2P49721 201 aa6.14□□□□□ -1.43
RTN3-209ENST00000538995 Q75L30 129 aa6.14□□□□□ -1.43
RTN3-209ENST00000538995 OBSCN-AS1Q96MR7 158 aa6.14□□□□□ -1.43
RTN3-209ENST00000538995 ORMDL1Q9P0S3 153 aa6.14□□□□□ -1.43
RTN3-209ENST00000538995 A0A087WSZ3 146 aa6.13□□□□□ -1.43
RTN3-209ENST00000538995 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
RTN3-209ENST00000538995 TMEM256-PLSCR3K7ERE1 68 aa6.11□□□□□ -1.43
RTN3-209ENST00000538995 TRBV7-4A0A0J9YYF1 115 aa6.1□□□□□ -1.43
RTN3-209ENST00000538995 A0A1W2PNM2 257 aa6.1□□□□□ -1.43
RTN3-209ENST00000538995 MT1HP80294 61 aa6.1□□□□□ -1.43
RTN3-209ENST00000538995 ATP11AUNQ6ZP68 121 aa6.1□□□□□ -1.43
RTN3-209ENST00000538995 ANKRD29Q8N6D5 301 aa6.09□□□□□ -1.43
RTN3-209ENST00000538995 Q96NJ1 140 aa6.09□□□□□ -1.43
RTN3-209ENST00000538995 TRACP01848 142 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms