RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CXCL6P80162 114 aa9.13□□□□□ -0.95
ATL3-203ENST00000538786 Q8NBF4 154 aa9.13□□□□□ -0.95
ATL3-203ENST00000538786 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
ATL3-203ENST00000538786 A0A087WVE0 104 aa9.12□□□□□ -0.95
ATL3-203ENST00000538786 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
ATL3-203ENST00000538786 DNAH2Q9P225 4427 aa9.1□□□□□ -0.95
ATL3-203ENST00000538786 NREPQ16612 68 aa9.1□□□□□ -0.95
ATL3-203ENST00000538786 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
ATL3-203ENST00000538786 PSORS1C2Q9UIG4 136 aa9.09□□□□□ -0.95
ATL3-203ENST00000538786 IGFL1Q6UW32 110 aa9.08□□□□□ -0.96
ATL3-203ENST00000538786 DNAH6Q9C0G6 4158 aa9.08□□□□□ -0.96
ATL3-203ENST00000538786 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
ATL3-203ENST00000538786 ATOX1O00244 68 aa9.07□□□□□ -0.96
ATL3-203ENST00000538786 CRYGAP11844 174 aa9.07□□□□□ -0.96
ATL3-203ENST00000538786 HECTD4Q9Y4D8 3996 aa9.04□□□□□ -0.96
ATL3-203ENST00000538786 SCXQ7RTU7 201 aa9.04□□□□□ -0.96
ATL3-203ENST00000538786 DNAH17Q9UFH2 4485 aa9.04□□□□□ -0.96
ATL3-203ENST00000538786 A0A0G2JQZ4 141 aa9.03□□□□□ -0.96
ATL3-203ENST00000538786 BPY2O14599 106 aa9.02□□□□□ -0.97
ATL3-203ENST00000538786 ZNF861PO60384 105 aa9.02□□□□□ -0.97
ATL3-203ENST00000538786 FAM30AQ9NZY2 134 aa9.02□□□□□ -0.97
ATL3-203ENST00000538786 ZNF706Q9Y5V0 76 aaPredicted RBP9.02□□□□□ -0.97
ATL3-203ENST00000538786 CCDC179H3BU77 68 aa9.01□□□□□ -0.97
ATL3-203ENST00000538786 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
ATL3-203ENST00000538786 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
ATL3-203ENST00000538786 Q6ZSA8 131 aa9□□□□□ -0.97
ATL3-203ENST00000538786 KRTAP10-1P60331 282 aa8.98□□□□□ -0.97
ATL3-203ENST00000538786 IGLV7-43P04211 117 aa8.97□□□□□ -0.97
ATL3-203ENST00000538786 A0A087WSZ3 146 aa8.96□□□□□ -0.97
ATL3-203ENST00000538786 IGKV4-1P06312 121 aa8.96□□□□□ -0.97
ATL3-203ENST00000538786 COX7CP15954 63 aa8.96□□□□□ -0.97
ATL3-203ENST00000538786 UQCRQO14949 82 aa8.95□□□□□ -0.98
ATL3-203ENST00000538786 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
ATL3-203ENST00000538786 Q8N9L7 120 aa8.95□□□□□ -0.98
ATL3-203ENST00000538786 HYDINQ4G0P3 5121 aa8.95□□□□□ -0.98
ATL3-203ENST00000538786 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
ATL3-203ENST00000538786 LCE6AA0A183 80 aa8.94□□□□□ -0.98
ATL3-203ENST00000538786 IGLV9-49A0A0B4J1Y8 123 aa8.93□□□□□ -0.98
ATL3-203ENST00000538786 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
ATL3-203ENST00000538786 FRAS1Q86XX4 4008 aa8.93□□□□□ -0.98
ATL3-203ENST00000538786 C9orf153Q5TBE3 101 aa8.92□□□□□ -0.98
ATL3-203ENST00000538786 DSCR10P59022 87 aa8.91□□□□□ -0.98
ATL3-203ENST00000538786 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
ATL3-203ENST00000538786 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
ATL3-203ENST00000538786 SACSQ9NZJ4 4579 aa8.9□□□□□ -0.98
ATL3-203ENST00000538786 RPS28P62857 69 aaKnown RBP8.9□□□□□ -0.99
ATL3-203ENST00000538786 LINC00336Q6ZUF6 198 aa8.89□□□□□ -0.99
ATL3-203ENST00000538786 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
ATL3-203ENST00000538786 DNAH11Q96DT5 4516 aa8.87□□□□□ -0.99
ATL3-203ENST00000538786 MOBPQ13875 183 aa8.87□□□□□ -0.99
ATL3-203ENST00000538786 TRAV7A0A075B6U4 112 aa8.86□□□□□ -0.99
ATL3-203ENST00000538786 J3KT08 172 aa8.86□□□□□ -0.99
ATL3-203ENST00000538786 FAT2Q9NYQ8 4349 aa8.86□□□□□ -0.99
ATL3-203ENST00000538786 K7EQZ3 153 aa8.86□□□□□ -0.99
ATL3-203ENST00000538786 DNAH8Q96JB1 4490 aa8.85□□□□□ -0.99
ATL3-203ENST00000538786 DEFB116Q30KQ4 102 aa8.85□□□□□ -0.99
ATL3-203ENST00000538786 PKD1P98161 4303 aa8.85□□□□□ -0.99
ATL3-203ENST00000538786 LINC00472Q9H8W2 130 aa8.84□□□□□ -0.99
ATL3-203ENST00000538786 DNAH5Q8TE73 4624 aa8.83□□□□□ -1
ATL3-203ENST00000538786 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
ATL3-203ENST00000538786 HRCT1Q6UXD1 115 aa8.8□□□□□ -1
ATL3-203ENST00000538786 A0A1B0GVY2 172 aa8.78□□□□□ -1
ATL3-203ENST00000538786 RYR2Q92736 4967 aa8.78□□□□□ -1
ATL3-203ENST00000538786 A8MWP4 228 aa8.78□□□□□ -1
ATL3-203ENST00000538786 HCG22E2RYF7 251 aa8.78□□□□□ -1
ATL3-203ENST00000538786 OCR1Q9BZK8 76 aa8.78□□□□□ -1
ATL3-203ENST00000538786 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
ATL3-203ENST00000538786 PRR15Q8IV56 129 aa8.76□□□□□ -1.01
ATL3-203ENST00000538786 C20orf197Q8N268 126 aa8.76□□□□□ -1.01
ATL3-203ENST00000538786 Q96NJ1 140 aa8.76□□□□□ -1.01
ATL3-203ENST00000538786 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
ATL3-203ENST00000538786 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
ATL3-203ENST00000538786 CD164Q04900 197 aa8.74□□□□□ -1.01
ATL3-203ENST00000538786 A0A087X002 238 aa8.71□□□□□ -1.02
ATL3-203ENST00000538786 NDUFB1O75438 58 aa8.71□□□□□ -1.02
ATL3-203ENST00000538786 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
ATL3-203ENST00000538786 KRTAP29-1A8MX34 341 aaPredicted RBP8.7□□□□□ -1.02
ATL3-203ENST00000538786 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
ATL3-203ENST00000538786 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
ATL3-203ENST00000538786 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
ATL3-203ENST00000538786 LRP1BQ9NZR2 4599 aa8.68□□□□□ -1.02
ATL3-203ENST00000538786 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
ATL3-203ENST00000538786 TMEM254Q8TBM7 123 aa8.67□□□□□ -1.02
ATL3-203ENST00000538786 TMEM258P61165 79 aa8.66□□□□□ -1.02
ATL3-203ENST00000538786 SNURFQ9Y675 71 aa8.66□□□□□ -1.02
ATL3-203ENST00000538786 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
ATL3-203ENST00000538786 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
ATL3-203ENST00000538786 CDK2AP2O75956 126 aa8.64□□□□□ -1.03
ATL3-203ENST00000538786 PLA2G1BP04054 148 aaKnown RBP8.63□□□□□ -1.03
ATL3-203ENST00000538786 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
ATL3-203ENST00000538786 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
ATL3-203ENST00000538786 RYR3Q15413 4870 aa8.63□□□□□ -1.03
ATL3-203ENST00000538786 A0A0U1RQV1 116 aa8.62□□□□□ -1.03
ATL3-203ENST00000538786 A0A1B0GVX0 72 aa8.62□□□□□ -1.03
ATL3-203ENST00000538786 H7BZZ5 65 aa8.62□□□□□ -1.03
ATL3-203ENST00000538786 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
ATL3-203ENST00000538786 NDUFC1O43677 76 aa8.61□□□□□ -1.03
ATL3-203ENST00000538786 PKHD1P08F94 4074 aa8.61□□□□□ -1.03
ATL3-203ENST00000538786 hDV103S1A0JD37 113 aa8.6□□□□□ -1.03
ATL3-203ENST00000538786 Q5XG85 94 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms