RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PLAC8Q9NZF1 115 aa6.89□□□□□ -1.31
LINC00346-201ENST00000538077 CR1P17927 2039 aa6.87□□□□□ -1.31
LINC00346-201ENST00000538077 Q8NDZ9 215 aa6.87□□□□□ -1.31
LINC00346-201ENST00000538077 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
LINC00346-201ENST00000538077 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
LINC00346-201ENST00000538077 KRTAP1-5Q9BYS1 174 aa6.85□□□□□ -1.31
LINC00346-201ENST00000538077 F8P00451 2351 aa6.85□□□□□ -1.31
LINC00346-201ENST00000538077 KRTAP10-1P60331 282 aa6.84□□□□□ -1.31
LINC00346-201ENST00000538077 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.31
LINC00346-201ENST00000538077 A0A1B0GU33 70 aa6.84□□□□□ -1.31
LINC00346-201ENST00000538077 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
LINC00346-201ENST00000538077 PKD1L2Q7Z442 2459 aa6.83□□□□□ -1.32
LINC00346-201ENST00000538077 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
LINC00346-201ENST00000538077 MTORP42345 2549 aa6.82□□□□□ -1.32
LINC00346-201ENST00000538077 PRAC1Q96KF2 57 aa6.81□□□□□ -1.32
LINC00346-201ENST00000538077 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
LINC00346-201ENST00000538077 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
LINC00346-201ENST00000538077 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
LINC00346-201ENST00000538077 CSAG1Q6PB30 78 aa6.79□□□□□ -1.32
LINC00346-201ENST00000538077 USP9YO00507 2555 aaPredicted RBP6.79□□□□□ -1.32
LINC00346-201ENST00000538077 Q5XG85 94 aa6.79□□□□□ -1.32
LINC00346-201ENST00000538077 LCE6AA0A183 80 aa6.78□□□□□ -1.32
LINC00346-201ENST00000538077 Q75L30 129 aa6.78□□□□□ -1.32
LINC00346-201ENST00000538077 BSNQ9UPA5 3926 aa6.78□□□□□ -1.32
LINC00346-201ENST00000538077 ZFHX4Q86UP3 3567 aa6.77□□□□□ -1.33
LINC00346-201ENST00000538077 Q5W150 140 aa6.77□□□□□ -1.33
LINC00346-201ENST00000538077 SPINK7P58062 85 aa6.76□□□□□ -1.33
LINC00346-201ENST00000538077 A0A0C4DFX4 3053 aa6.74□□□□□ -1.33
LINC00346-201ENST00000538077 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
LINC00346-201ENST00000538077 SPENQ96T58 3664 aaKnown RBP6.73□□□□□ -1.33
LINC00346-201ENST00000538077 R4GN34 69 aa6.73□□□□□ -1.33
LINC00346-201ENST00000538077 PANO1I0J062 215 aa6.7□□□□□ -1.34
LINC00346-201ENST00000538077 HECTD1Q9ULT8 2610 aa6.69□□□□□ -1.34
LINC00346-201ENST00000538077 SPRR1AP35321 89 aa6.68□□□□□ -1.34
LINC00346-201ENST00000538077 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
LINC00346-201ENST00000538077 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
LINC00346-201ENST00000538077 LAMA5O15230 3695 aa6.67□□□□□ -1.34
LINC00346-201ENST00000538077 AKAP13Q12802 2813 aa6.67□□□□□ -1.34
LINC00346-201ENST00000538077 LINC01558Q9Y6Z2 57 aa6.66□□□□□ -1.34
LINC00346-201ENST00000538077 M0QZ58 72 aa6.65□□□□□ -1.34
LINC00346-201ENST00000538077 LINC00472Q9H8W2 130 aa6.65□□□□□ -1.34
LINC00346-201ENST00000538077 DCHS1Q96JQ0 3298 aa6.65□□□□□ -1.34
LINC00346-201ENST00000538077 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
LINC00346-201ENST00000538077 KRTAP26-1Q6PEX3 210 aa6.65□□□□□ -1.34
LINC00346-201ENST00000538077 FRYLO94915 3013 aa6.65□□□□□ -1.35
LINC00346-201ENST00000538077 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
LINC00346-201ENST00000538077 CFAP54Q96N23 3096 aa6.63□□□□□ -1.35
LINC00346-201ENST00000538077 Q5VV11 94 aa6.63□□□□□ -1.35
LINC00346-201ENST00000538077 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
LINC00346-201ENST00000538077 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
LINC00346-201ENST00000538077 A0A087X002 238 aa6.6□□□□□ -1.35
LINC00346-201ENST00000538077 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
LINC00346-201ENST00000538077 SPRR1BP22528 89 aa6.58□□□□□ -1.36
LINC00346-201ENST00000538077 SPATA8Q6RVD6 105 aa6.58□□□□□ -1.36
LINC00346-201ENST00000538077 DMXL1Q9Y485 3027 aa6.57□□□□□ -1.36
LINC00346-201ENST00000538077 ZFHX3Q15911 3703 aa6.56□□□□□ -1.36
LINC00346-201ENST00000538077 Q6ZR54 194 aa6.56□□□□□ -1.36
LINC00346-201ENST00000538077 OXTP01178 125 aa6.55□□□□□ -1.36
LINC00346-201ENST00000538077 MGAQ8IWI9 3026 aa6.55□□□□□ -1.36
LINC00346-201ENST00000538077 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
LINC00346-201ENST00000538077 MUC3AQ02505 3323 aa6.54□□□□□ -1.36
LINC00346-201ENST00000538077 LOC400499M0QZD8 3231 aa6.53□□□□□ -1.36
LINC00346-201ENST00000538077 FLNAP21333 2647 aaKnown RBP6.53□□□□□ -1.36
LINC00346-201ENST00000538077 PRRC2CQ9Y520 2896 aaKnown RBP6.53□□□□□ -1.36
LINC00346-201ENST00000538077 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.36
LINC00346-201ENST00000538077 EPG5Q9HCE0 2579 aa6.52□□□□□ -1.37
LINC00346-201ENST00000538077 ITPR3Q14573 2671 aa6.51□□□□□ -1.37
LINC00346-201ENST00000538077 FRYQ5TBA9 3013 aa6.51□□□□□ -1.37
LINC00346-201ENST00000538077 CSMD1Q96PZ7 3565 aa6.51□□□□□ -1.37
LINC00346-201ENST00000538077 BOD1L1Q8NFC6 3051 aa6.5□□□□□ -1.37
LINC00346-201ENST00000538077 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
LINC00346-201ENST00000538077 NOTCH2NLQ7Z3S9 236 aa6.49□□□□□ -1.37
LINC00346-201ENST00000538077 MGAM2Q2M2H8 2515 aa6.48□□□□□ -1.37
LINC00346-201ENST00000538077 ROMO1P60602 79 aa6.48□□□□□ -1.37
LINC00346-201ENST00000538077 RPL37P61927 97 aaKnown RBP6.48□□□□□ -1.37
LINC00346-201ENST00000538077 USP24Q9UPU5 2620 aa6.47□□□□□ -1.37
LINC00346-201ENST00000538077 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
LINC00346-201ENST00000538077 RELNP78509 3460 aa6.44□□□□□ -1.38
LINC00346-201ENST00000538077 LRBAP50851 2863 aa6.43□□□□□ -1.38
LINC00346-201ENST00000538077 KRTAP4-16G5E9R7 235 aaPredicted RBP6.42□□□□□ -1.38
LINC00346-201ENST00000538077 ASB16-AS1Q495Z4 193 aa6.4□□□□□ -1.38
LINC00346-201ENST00000538077 VPS13CQ709C8 3753 aa6.4□□□□□ -1.38
LINC00346-201ENST00000538077 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.39
LINC00346-201ENST00000538077 FLNBO75369 2602 aaKnown RBP6.39□□□□□ -1.39
LINC00346-201ENST00000538077 ATMQ13315 3056 aa6.39□□□□□ -1.39
LINC00346-201ENST00000538077 CFAP47Q6ZTR5 3102 aa6.37□□□□□ -1.39
LINC00346-201ENST00000538077 HELZ2Q9BYK8 2649 aaKnown RBP6.37□□□□□ -1.39
LINC00346-201ENST00000538077 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
LINC00346-201ENST00000538077 AKAP9Q99996 3911 aa6.36□□□□□ -1.39
LINC00346-201ENST00000538077 DMXL2Q8TDJ6 3036 aa6.36□□□□□ -1.39
LINC00346-201ENST00000538077 ATRQ13535 2644 aa6.35□□□□□ -1.39
LINC00346-201ENST00000538077 A8MU10 97 aa6.35□□□□□ -1.39
LINC00346-201ENST00000538077 A8MUU9 505 aa6.35□□□□□ -1.39
LINC00346-201ENST00000538077 CFAP46Q8IYW2 2715 aa6.34□□□□□ -1.4
LINC00346-201ENST00000538077 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
LINC00346-201ENST00000538077 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
LINC00346-201ENST00000538077 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
LINC00346-201ENST00000538077 KRTAP29-1A8MX34 341 aaPredicted RBP6.32□□□□□ -1.4
LINC00346-201ENST00000538077 SVEP1Q4LDE5 3571 aa6.31□□□□□ -1.4
LINC00346-201ENST00000538077 MAST4O15021 2626 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms