RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 USP24Q9UPU5 2620 aa7.28□□□□□ -1.24
POLR1B-216ENST00000537335 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
POLR1B-216ENST00000537335 Q6ZR54 194 aa7.26□□□□□ -1.25
POLR1B-216ENST00000537335 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
POLR1B-216ENST00000537335 H1FX-AS1Q4G0G2 97 aa7.25□□□□□ -1.25
POLR1B-216ENST00000537335 A0A087X002 238 aa7.25□□□□□ -1.25
POLR1B-216ENST00000537335 DMBT1Q9UGM3 2413 aaPredicted RBP7.24□□□□□ -1.25
POLR1B-216ENST00000537335 SPRR1BP22528 89 aa7.24□□□□□ -1.25
POLR1B-216ENST00000537335 TNP2Q05952 138 aa7.24□□□□□ -1.25
POLR1B-216ENST00000537335 LCE6AA0A183 80 aa7.23□□□□□ -1.25
POLR1B-216ENST00000537335 CDH23Q9H251 3354 aa7.22□□□□□ -1.25
POLR1B-216ENST00000537335 TRANK1O15050 2925 aa7.21□□□□□ -1.26
POLR1B-216ENST00000537335 A0A087WTM6 91 aa7.2□□□□□ -1.26
POLR1B-216ENST00000537335 EPG5Q9HCE0 2579 aa7.2□□□□□ -1.26
POLR1B-216ENST00000537335 FASNP49327 2511 aaKnown RBP7.2□□□□□ -1.26
POLR1B-216ENST00000537335 KRTAP26-1Q6PEX3 210 aa7.19□□□□□ -1.26
POLR1B-216ENST00000537335 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
POLR1B-216ENST00000537335 TRIOO75962 3097 aa7.16□□□□□ -1.26
POLR1B-216ENST00000537335 XIRP2A4UGR9 3374 aa7.14□□□□□ -1.27
POLR1B-216ENST00000537335 K7EIL1 84 aa7.14□□□□□ -1.27
POLR1B-216ENST00000537335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
POLR1B-216ENST00000537335 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
POLR1B-216ENST00000537335 S4R3F8 94 aa7.09□□□□□ -1.27
POLR1B-216ENST00000537335 PANO1I0J062 215 aa7.07□□□□□ -1.28
POLR1B-216ENST00000537335 SZT2Q5T011 3432 aa7.07□□□□□ -1.28
POLR1B-216ENST00000537335 MGAM2Q2M2H8 2515 aa7.05□□□□□ -1.28
POLR1B-216ENST00000537335 A8MUU9 505 aa7.05□□□□□ -1.28
POLR1B-216ENST00000537335 R4GN34 69 aa7.05□□□□□ -1.28
POLR1B-216ENST00000537335 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
POLR1B-216ENST00000537335 C20orf166-AS1Q96NR2 134 aa7.04□□□□□ -1.28
POLR1B-216ENST00000537335 KRTAP24-1Q3LI83 254 aa7.02□□□□□ -1.29
POLR1B-216ENST00000537335 KRTAP4-16G5E9R7 235 aaPredicted RBP7.02□□□□□ -1.29
POLR1B-216ENST00000537335 WDFY4Q6ZS81 3184 aa7.01□□□□□ -1.29
POLR1B-216ENST00000537335 AKAP13Q12802 2813 aa7□□□□□ -1.29
POLR1B-216ENST00000537335 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
POLR1B-216ENST00000537335 CFAP54Q96N23 3096 aa7□□□□□ -1.29
POLR1B-216ENST00000537335 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
POLR1B-216ENST00000537335 KRTAP10-3P60369 221 aa6.97□□□□□ -1.29
POLR1B-216ENST00000537335 Q6ZSA8 131 aa6.97□□□□□ -1.29
POLR1B-216ENST00000537335 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
POLR1B-216ENST00000537335 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
POLR1B-216ENST00000537335 ATRQ13535 2644 aa6.95□□□□□ -1.3
POLR1B-216ENST00000537335 MGAQ8IWI9 3026 aa6.93□□□□□ -1.3
POLR1B-216ENST00000537335 VPS13AQ96RL7 3174 aa6.93□□□□□ -1.3
POLR1B-216ENST00000537335 PLAC8Q9NZF1 115 aa6.93□□□□□ -1.3
POLR1B-216ENST00000537335 NBEAL1Q6ZS30 2694 aa6.93□□□□□ -1.3
POLR1B-216ENST00000537335 LAMA1P25391 3075 aa6.93□□□□□ -1.3
POLR1B-216ENST00000537335 M0QZ58 72 aa6.91□□□□□ -1.3
POLR1B-216ENST00000537335 DNAH14Q0VDD8 3507 aa6.91□□□□□ -1.3
POLR1B-216ENST00000537335 VCANP13611 3396 aa6.91□□□□□ -1.3
POLR1B-216ENST00000537335 FLNBO75369 2602 aaKnown RBP6.9□□□□□ -1.3
POLR1B-216ENST00000537335 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.3
POLR1B-216ENST00000537335 ZNF292O60281 2723 aa6.88□□□□□ -1.31
POLR1B-216ENST00000537335 UNC79Q9P2D8 2635 aa6.87□□□□□ -1.31
POLR1B-216ENST00000537335 CENPEQ02224 2701 aa6.87□□□□□ -1.31
POLR1B-216ENST00000537335 NOTCH1P46531 2555 aa6.86□□□□□ -1.31
POLR1B-216ENST00000537335 COL6A3P12111 3177 aa6.86□□□□□ -1.31
POLR1B-216ENST00000537335 STAB2Q8WWQ8 2551 aa6.86□□□□□ -1.31
POLR1B-216ENST00000537335 EYSQ5T1H1 3165 aa6.85□□□□□ -1.31
POLR1B-216ENST00000537335 CELSR3Q9NYQ7 3312 aa6.84□□□□□ -1.31
POLR1B-216ENST00000537335 HECTD1Q9ULT8 2610 aa6.84□□□□□ -1.31
POLR1B-216ENST00000537335 CHD6Q8TD26 2715 aa6.83□□□□□ -1.32
POLR1B-216ENST00000537335 MAST4O15021 2626 aa6.83□□□□□ -1.32
POLR1B-216ENST00000537335 HELZ2Q9BYK8 2649 aaKnown RBP6.81□□□□□ -1.32
POLR1B-216ENST00000537335 J3QL48 77 aa6.81□□□□□ -1.32
POLR1B-216ENST00000537335 STAB1Q9NY15 2570 aa6.79□□□□□ -1.32
POLR1B-216ENST00000537335 SPEGQ15772 3267 aa6.78□□□□□ -1.32
POLR1B-216ENST00000537335 DSPP15924 2871 aaKnown RBP6.78□□□□□ -1.32
POLR1B-216ENST00000537335 REV3LO60673 3130 aa6.75□□□□□ -1.33
POLR1B-216ENST00000537335 ITPR3Q14573 2671 aa6.75□□□□□ -1.33
POLR1B-216ENST00000537335 GCN1Q92616 2671 aaKnown RBP6.75□□□□□ -1.33
POLR1B-216ENST00000537335 FLNAP21333 2647 aaKnown RBP6.73□□□□□ -1.33
POLR1B-216ENST00000537335 SPTBN5Q9NRC6 3674 aaKnown RBP6.72□□□□□ -1.33
POLR1B-216ENST00000537335 FRYLO94915 3013 aa6.72□□□□□ -1.33
POLR1B-216ENST00000537335 MAP1AP78559 2803 aaPredicted RBP6.72□□□□□ -1.33
POLR1B-216ENST00000537335 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
POLR1B-216ENST00000537335 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
POLR1B-216ENST00000537335 TNRC18O15417 2968 aaPredicted RBP6.68□□□□□ -1.34
POLR1B-216ENST00000537335 CFAP46Q8IYW2 2715 aa6.67□□□□□ -1.34
POLR1B-216ENST00000537335 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
POLR1B-216ENST00000537335 P0C880 135 aa6.67□□□□□ -1.34
POLR1B-216ENST00000537335 FREM2Q5SZK8 3169 aa6.67□□□□□ -1.34
POLR1B-216ENST00000537335 BOD1L1Q8NFC6 3051 aa6.66□□□□□ -1.34
POLR1B-216ENST00000537335 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
POLR1B-216ENST00000537335 KRTAP1-1Q07627 177 aa6.65□□□□□ -1.35
POLR1B-216ENST00000537335 FRYQ5TBA9 3013 aa6.65□□□□□ -1.35
POLR1B-216ENST00000537335 NBEAQ8NFP9 2946 aa6.63□□□□□ -1.35
POLR1B-216ENST00000537335 H0YAA0 97 aa6.62□□□□□ -1.35
POLR1B-216ENST00000537335 KRTAP7-1Q8IUC3 87 aa6.61□□□□□ -1.35
POLR1B-216ENST00000537335 MYO15AQ9UKN7 3530 aa6.6□□□□□ -1.35
POLR1B-216ENST00000537335 NBEAL2Q6ZNJ1 2754 aa6.59□□□□□ -1.35
POLR1B-216ENST00000537335 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
POLR1B-216ENST00000537335 M0R2T5 61 aa6.58□□□□□ -1.36
POLR1B-216ENST00000537335 TEP1Q99973 2627 aaKnown RBP6.58□□□□□ -1.36
POLR1B-216ENST00000537335 DMXL2Q8TDJ6 3036 aa6.58□□□□□ -1.36
POLR1B-216ENST00000537335 ITPR1Q14643 2758 aa6.57□□□□□ -1.36
POLR1B-216ENST00000537335 BAHCC1Q9P281 2608 aa6.54□□□□□ -1.36
POLR1B-216ENST00000537335 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
POLR1B-216ENST00000537335 ATMQ13315 3056 aa6.53□□□□□ -1.36
POLR1B-216ENST00000537335 IGSF10Q6WRI0 2623 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms