RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 PRR15LQ9BU68 103 aa9.98□□□□□ -0.81
CHFR-213ENST00000536843 H3BPC8 53 aa9.98□□□□□ -0.81
CHFR-213ENST00000536843 SPRR1AP35321 89 aa9.97□□□□□ -0.81
CHFR-213ENST00000536843 Q75L30 129 aa9.97□□□□□ -0.81
CHFR-213ENST00000536843 ANK2Q01484 3957 aa9.97□□□□□ -0.81
CHFR-213ENST00000536843 NDUFS5O43920 106 aa9.96□□□□□ -0.82
CHFR-213ENST00000536843 PKD1L1Q8TDX9 2849 aa9.96□□□□□ -0.82
CHFR-213ENST00000536843 LCA10Q71F78 164 aa9.95□□□□□ -0.82
CHFR-213ENST00000536843 IGKV2D-24A0A075B6R9 120 aa9.95□□□□□ -0.82
CHFR-213ENST00000536843 LOC101927531A0A1B0GV80 90 aa9.95□□□□□ -0.82
CHFR-213ENST00000536843 WFDC13Q8IUB5 93 aa9.95□□□□□ -0.82
CHFR-213ENST00000536843 PLA2G2DQ9UNK4 145 aa9.95□□□□□ -0.82
CHFR-213ENST00000536843 PHF5AQ7RTV0 110 aaKnown RBP9.94□□□□□ -0.82
CHFR-213ENST00000536843 A6NN06 94 aa9.94□□□□□ -0.82
CHFR-213ENST00000536843 KRTAP29-1A8MX34 341 aaPredicted RBP9.94□□□□□ -0.82
CHFR-213ENST00000536843 SPTSSBQ8NFR3 76 aa9.94□□□□□ -0.82
CHFR-213ENST00000536843 TENM3Q9P273 2699 aa9.93□□□□□ -0.82
CHFR-213ENST00000536843 DEFB131BA0A096LNP1 70 aa9.93□□□□□ -0.82
CHFR-213ENST00000536843 IGLV1-50A0A075B6I6 118 aa9.93□□□□□ -0.82
CHFR-213ENST00000536843 H0Y9P7 68 aa9.92□□□□□ -0.82
CHFR-213ENST00000536843 C11orf45Q8TAV5 145 aa9.92□□□□□ -0.82
CHFR-213ENST00000536843 LINC00476Q8WZB0 136 aa9.92□□□□□ -0.82
CHFR-213ENST00000536843 DNAH3Q8TD57 4116 aa9.91□□□□□ -0.82
CHFR-213ENST00000536843 IGLV5-37A0A075B6J1 123 aa9.91□□□□□ -0.82
CHFR-213ENST00000536843 DEFB116Q30KQ4 102 aa9.91□□□□□ -0.82
CHFR-213ENST00000536843 RPL37AP8A6NKH3 93 aa9.91□□□□□ -0.82
CHFR-213ENST00000536843 C9orf163Q8N9P6 203 aa9.91□□□□□ -0.82
CHFR-213ENST00000536843 A6NED7 52 aa9.89□□□□□ -0.83
CHFR-213ENST00000536843 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
CHFR-213ENST00000536843 MDFIQ99750 246 aa9.89□□□□□ -0.83
CHFR-213ENST00000536843 LINC01556Q5JQF7 62 aa9.88□□□□□ -0.83
CHFR-213ENST00000536843 CDC42SE1Q9NRR8 79 aa9.88□□□□□ -0.83
CHFR-213ENST00000536843 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
CHFR-213ENST00000536843 COA5Q86WW8 74 aa9.85□□□□□ -0.83
CHFR-213ENST00000536843 NOTCH1P46531 2555 aa9.85□□□□□ -0.83
CHFR-213ENST00000536843 CASC2Q6XLA1 102 aa9.84□□□□□ -0.83
CHFR-213ENST00000536843 FAM168BA1KXE4 195 aa9.83□□□□□ -0.84
CHFR-213ENST00000536843 IGLV8-61A0A075B6I0 122 aa9.82□□□□□ -0.84
CHFR-213ENST00000536843 A0A087WSZ3 146 aa9.82□□□□□ -0.84
CHFR-213ENST00000536843 A0A0G2JQZ4 141 aa9.82□□□□□ -0.84
CHFR-213ENST00000536843 A0A1W2PNN7 141 aa9.82□□□□□ -0.84
CHFR-213ENST00000536843 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
CHFR-213ENST00000536843 RPL37AP61513 92 aaKnown RBP9.82□□□□□ -0.84
CHFR-213ENST00000536843 C7orf65Q6ZTY9 151 aa9.82□□□□□ -0.84
CHFR-213ENST00000536843 DNAH10OSP0CZ25 163 aa9.81□□□□□ -0.84
CHFR-213ENST00000536843 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
CHFR-213ENST00000536843 CNBPP62633 177 aaKnown RBP9.8□□□□□ -0.84
CHFR-213ENST00000536843 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
CHFR-213ENST00000536843 LINC01558Q9Y6Z2 57 aa9.78□□□□□ -0.84
CHFR-213ENST00000536843 MOBPQ13875 183 aa9.76□□□□□ -0.85
CHFR-213ENST00000536843 HUWE1Q7Z6Z7 4374 aaKnown RBP9.76□□□□□ -0.85
CHFR-213ENST00000536843 K7EIL1 84 aa9.76□□□□□ -0.85
CHFR-213ENST00000536843 A8MWP4 228 aa9.75□□□□□ -0.85
CHFR-213ENST00000536843 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
CHFR-213ENST00000536843 REG3GQ6UW15 175 aa9.75□□□□□ -0.85
CHFR-213ENST00000536843 NBEAL1Q6ZS30 2694 aa9.73□□□□□ -0.85
CHFR-213ENST00000536843 MGAM2Q2M2H8 2515 aa9.73□□□□□ -0.85
CHFR-213ENST00000536843 DNAH1Q9P2D7 4330 aa9.72□□□□□ -0.85
CHFR-213ENST00000536843 LINC00472Q9H8W2 130 aa9.71□□□□□ -0.85
CHFR-213ENST00000536843 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
CHFR-213ENST00000536843 MMP24-AS1A0A0U1RRL7 71 aa9.67□□□□□ -0.86
CHFR-213ENST00000536843 SPINK7P58062 85 aa9.65□□□□□ -0.86
CHFR-213ENST00000536843 PCOTHQ58A44 107 aa9.64□□□□□ -0.87
CHFR-213ENST00000536843 KRTAP21-3Q3LHN1 58 aa9.64□□□□□ -0.87
CHFR-213ENST00000536843 PRLHP81277 87 aa9.63□□□□□ -0.87
CHFR-213ENST00000536843 TP53AIP1Q9HCN2 124 aa9.62□□□□□ -0.87
CHFR-213ENST00000536843 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
CHFR-213ENST00000536843 ASB16-AS1Q495Z4 193 aa9.61□□□□□ -0.87
CHFR-213ENST00000536843 H0Y9J4 135 aa9.6□□□□□ -0.87
CHFR-213ENST00000536843 SPRR1BP22528 89 aa9.6□□□□□ -0.87
CHFR-213ENST00000536843 Q6ZR54 194 aa9.6□□□□□ -0.87
CHFR-213ENST00000536843 HRES1P13985 223 aa9.58□□□□□ -0.88
CHFR-213ENST00000536843 KRTAP1-5Q9BYS1 174 aa9.57□□□□□ -0.88
CHFR-213ENST00000536843 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
CHFR-213ENST00000536843 DNAH9Q9NYC9 4486 aa9.55□□□□□ -0.88
CHFR-213ENST00000536843 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
CHFR-213ENST00000536843 DNAH10Q8IVF4 4471 aa9.55□□□□□ -0.88
CHFR-213ENST00000536843 LINC00313P59037 77 aa9.54□□□□□ -0.88
CHFR-213ENST00000536843 STAB2Q8WWQ8 2551 aa9.52□□□□□ -0.89
CHFR-213ENST00000536843 LYSTQ99698 3801 aa9.51□□□□□ -0.89
CHFR-213ENST00000536843 APLNQ9ULZ1 77 aa9.51□□□□□ -0.89
CHFR-213ENST00000536843 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
CHFR-213ENST00000536843 A0A096LNI7 61 aa9.49□□□□□ -0.89
CHFR-213ENST00000536843 Q96NJ1 140 aa9.48□□□□□ -0.89
CHFR-213ENST00000536843 COL7A1Q02388 2944 aa9.48□□□□□ -0.89
CHFR-213ENST00000536843 C8orf17Q9NRJ1 99 aa9.47□□□□□ -0.89
CHFR-213ENST00000536843 DYNC2H1Q8NCM8 4307 aaKnown RBP9.47□□□□□ -0.89
CHFR-213ENST00000536843 PLA2G1BP04054 148 aaKnown RBP9.46□□□□□ -0.89
CHFR-213ENST00000536843 DNHD1Q96M86 4753 aa9.46□□□□□ -0.89
CHFR-213ENST00000536843 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
CHFR-213ENST00000536843 TENM2Q9NT68 2774 aa9.43□□□□□ -0.9
CHFR-213ENST00000536843 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
CHFR-213ENST00000536843 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
CHFR-213ENST00000536843 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
CHFR-213ENST00000536843 PRR26Q8N8Z3 221 aa9.41□□□□□ -0.9
CHFR-213ENST00000536843 A0A087X002 238 aa9.41□□□□□ -0.9
CHFR-213ENST00000536843 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
CHFR-213ENST00000536843 DNAH7Q8WXX0 4024 aa9.39□□□□□ -0.91
CHFR-213ENST00000536843 MEGF8Q7Z7M0 2845 aa9.39□□□□□ -0.91
CHFR-213ENST00000536843 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms