RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TRBV20OR9-2A0A075B6H5 130 aa2.83□□□□□ -1.96
CLIP1-207ENST00000536634 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.83□□□□□ -1.96
CLIP1-207ENST00000536634 SMIM27A0A1W2PRY6 76 aa2.83□□□□□ -1.96
CLIP1-207ENST00000536634 IGKV2-29A2NJV5 120 aaPredicted RBP2.83□□□□□ -1.96
CLIP1-207ENST00000536634 MGPP08493 103 aa2.83□□□□□ -1.96
CLIP1-207ENST00000536634 RPL18AQ02543 176 aaKnown RBP2.83□□□□□ -1.96
CLIP1-207ENST00000536634 PMAIP1Q13794 54 aa2.83□□□□□ -1.96
CLIP1-207ENST00000536634 DEFB116Q30KQ4 102 aa2.83□□□□□ -1.96
CLIP1-207ENST00000536634 TRAV13-1A0A0B4J241 112 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 K7ERJ3 54 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 IGKCP01834 107 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 SCGB1C2P0DMR2 95 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 CXCL5P42830 114 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 MT1HP80294 61 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 LINC00483Q53H64 154 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 SPANXN1Q5VSR9 72 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 LINC00173Q6ZV60 143 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 ATP5L2Q7Z4Y8 100 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 AMN1Q8IY45 258 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 TMEM167BQ9NRX6 74 aa2.82□□□□□ -1.96
CLIP1-207ENST00000536634 NHP2Q9NX24 153 aaKnown RBP2.82□□□□□ -1.96
CLIP1-207ENST00000536634 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
CLIP1-207ENST00000536634 LINC00959A0A1B0GUT2 108 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 ATOX1O00244 68 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 LTAP01374 205 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 HIST1H4AP62805 103 aaKnown RBP2.81□□□□□ -1.96
CLIP1-207ENST00000536634 ASB16-AS1Q495Z4 193 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 CAMK2N2Q96S95 79 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 SERP1Q9Y6X1 66 aa2.81□□□□□ -1.96
CLIP1-207ENST00000536634 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
CLIP1-207ENST00000536634 FCGBPQ9Y6R7 5405 aaPredicted RBP2.8□□□□□ -1.96
CLIP1-207ENST00000536634 SMIM26A0A096LP01 95 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 MYMXA0A1B0GTQ4 84 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 A0A1B0GXF2 115 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 TCL1BO95988 128 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 NPYP01303 97 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 TMEM170BQ5T4T1 132 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 FMC1Q96HJ9 113 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 DSCR8Q96T75 97 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 LAMTOR3Q9UHA4 124 aa2.8□□□□□ -1.96
CLIP1-207ENST00000536634 C19orf71A6NCJ1 209 aa2.79□□□□□ -1.96
CLIP1-207ENST00000536634 ACYP1P07311 99 aa2.79□□□□□ -1.96
CLIP1-207ENST00000536634 UBE2BP63146 152 aa2.79□□□□□ -1.96
CLIP1-207ENST00000536634 KIAA0087Q14695 138 aa2.79□□□□□ -1.96
CLIP1-207ENST00000536634 C5orf38Q86SI9 138 aa2.79□□□□□ -1.96
CLIP1-207ENST00000536634 PRR15Q8IV56 129 aa2.79□□□□□ -1.96
CLIP1-207ENST00000536634 RPL39LQ96EH5 51 aaKnown RBP2.79□□□□□ -1.96
CLIP1-207ENST00000536634 TRBV7-6A0A0J9YX20 115 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 hADV29S1A0JD25 119 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 H3BT86 120 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 SLC25A20O43772 301 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 PSMB2P49721 201 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 MRPS36P82909 103 aaKnown RBP2.78□□□□□ -1.96
CLIP1-207ENST00000536634 SPAG11BQ08648 103 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 SS18Q15532 418 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 MRPL55Q7Z7F7 128 aaKnown RBP2.78□□□□□ -1.96
CLIP1-207ENST00000536634 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 COPS9Q8WXC6 57 aa2.78□□□□□ -1.96
CLIP1-207ENST00000536634 COX7A2LO14548 114 aa2.77□□□□□ -1.97
CLIP1-207ENST00000536634 NPC2P61916 151 aa2.77□□□□□ -1.97
CLIP1-207ENST00000536634 IGFL1Q6UW32 110 aa2.77□□□□□ -1.97
CLIP1-207ENST00000536634 LINC00643Q86TS7 51 aa2.77□□□□□ -1.97
CLIP1-207ENST00000536634 SERP2Q8N6R1 65 aa2.77□□□□□ -1.97
CLIP1-207ENST00000536634 IFI27L1Q96BM0 104 aa2.77□□□□□ -1.97
CLIP1-207ENST00000536634 CDC42SE2Q9NRR3 84 aa2.77□□□□□ -1.97
CLIP1-207ENST00000536634 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
CLIP1-207ENST00000536634 HBBP68871 147 aa2.76□□□□□ -1.97
CLIP1-207ENST00000536634 CENPWQ5EE01 88 aa2.76□□□□□ -1.97
CLIP1-207ENST00000536634 RNASE13Q5GAN3 156 aaKnown RBP2.76□□□□□ -1.97
CLIP1-207ENST00000536634 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
CLIP1-207ENST00000536634 FP248Q71RG6 208 aaPredicted RBP2.76□□□□□ -1.97
CLIP1-207ENST00000536634 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
CLIP1-207ENST00000536634 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
CLIP1-207ENST00000536634 NXT2Q9NPJ8 142 aaKnown RBP2.76□□□□□ -1.97
CLIP1-207ENST00000536634 MRPL35Q9NZE8 188 aaKnown RBP2.76□□□□□ -1.97
CLIP1-207ENST00000536634 C6orf48Q9UBA6 75 aa2.76□□□□□ -1.97
CLIP1-207ENST00000536634 IGKV2D-26A0A0A0MRZ7 120 aa2.75□□□□□ -1.97
CLIP1-207ENST00000536634 SDHAF1A6NFY7 115 aa2.75□□□□□ -1.97
CLIP1-207ENST00000536634 LOC107984156A0A0G2JMH3 177 aa2.74□□□□□ -1.97
CLIP1-207ENST00000536634 TRBV10-2A0A0K0K1G8 114 aa2.74□□□□□ -1.97
CLIP1-207ENST00000536634 LINC01549A6NIU2 74 aa2.74□□□□□ -1.97
CLIP1-207ENST00000536634 FAM104BQ5XKR9 115 aa2.74□□□□□ -1.97
CLIP1-207ENST00000536634 LYZL1Q6UWQ5 148 aa2.74□□□□□ -1.97
CLIP1-207ENST00000536634 ARL17AQ8IVW1 177 aa2.74□□□□□ -1.97
CLIP1-207ENST00000536634 LINC00337Q8N6G1 96 aa2.74□□□□□ -1.97
CLIP1-207ENST00000536634 LINC01546A6NGU7 62 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 I3L3M4 83 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 NDUFA1O15239 70 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 BCE1O60756 84 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 HBDP02042 147 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 RPL28P46779 137 aaKnown RBP2.73□□□□□ -1.97
CLIP1-207ENST00000536634 ATP5EP56381 51 aaPredicted RBP2.73□□□□□ -1.97
CLIP1-207ENST00000536634 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 RBM12B-AS1Q9P1G2 102 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 C22orf24Q9Y442 160 aa2.73□□□□□ -1.97
CLIP1-207ENST00000536634 TEX49A0A1B0GTD5 131 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms