RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 Q8NBF4 154 aa13.97□□□□□ -0.17
HMGA2-206ENST00000536545 DNAH8Q96JB1 4490 aa13.96□□□□□ -0.17
HMGA2-206ENST00000536545 IGLV8-61A0A075B6I0 122 aa13.96□□□□□ -0.18
HMGA2-206ENST00000536545 KRTAP10-2P60368 255 aa13.96□□□□□ -0.18
HMGA2-206ENST00000536545 A0A087WVE0 104 aa13.95□□□□□ -0.18
HMGA2-206ENST00000536545 A0A1B0GW54 56 aa13.95□□□□□ -0.18
HMGA2-206ENST00000536545 DNAH5Q8TE73 4624 aa13.95□□□□□ -0.18
HMGA2-206ENST00000536545 HAMPP81172 84 aa13.94□□□□□ -0.18
HMGA2-206ENST00000536545 CXCL6P80162 114 aa13.94□□□□□ -0.18
HMGA2-206ENST00000536545 HYDINQ4G0P3 5121 aa13.93□□□□□ -0.18
HMGA2-206ENST00000536545 FAT2Q9NYQ8 4349 aa13.93□□□□□ -0.18
HMGA2-206ENST00000536545 SPRR4Q96PI1 79 aa13.92□□□□□ -0.18
HMGA2-206ENST00000536545 PSORS1C2Q9UIG4 136 aa13.92□□□□□ -0.18
HMGA2-206ENST00000536545 SRRM2Q9UQ35 2752 aaKnown RBP13.92□□□□□ -0.18
HMGA2-206ENST00000536545 IGFL1Q6UW32 110 aa13.9□□□□□ -0.18
HMGA2-206ENST00000536545 NREPQ16612 68 aa13.87□□□□□ -0.19
HMGA2-206ENST00000536545 PKD1P98161 4303 aa13.86□□□□□ -0.19
HMGA2-206ENST00000536545 CRYGAP11844 174 aa13.86□□□□□ -0.19
HMGA2-206ENST00000536545 SCXQ7RTU7 201 aa13.85□□□□□ -0.19
HMGA2-206ENST00000536545 A0A0G2JQZ4 141 aa13.84□□□□□ -0.19
HMGA2-206ENST00000536545 SACSQ9NZJ4 4579 aa13.83□□□□□ -0.19
HMGA2-206ENST00000536545 FAM30AQ9NZY2 134 aa13.83□□□□□ -0.19
HMGA2-206ENST00000536545 ATOX1O00244 68 aa13.83□□□□□ -0.2
HMGA2-206ENST00000536545 LINC00483Q53H64 154 aa13.81□□□□□ -0.2
HMGA2-206ENST00000536545 Q6ZSA8 131 aa13.81□□□□□ -0.2
HMGA2-206ENST00000536545 CIRBP-AS1Q8TBR5 109 aa13.79□□□□□ -0.2
HMGA2-206ENST00000536545 ZNF861PO60384 105 aa13.78□□□□□ -0.2
HMGA2-206ENST00000536545 KRTAP10-1P60331 282 aa13.78□□□□□ -0.2
HMGA2-206ENST00000536545 CCDC179H3BU77 68 aa13.78□□□□□ -0.2
HMGA2-206ENST00000536545 ZNF706Q9Y5V0 76 aaPredicted RBP13.77□□□□□ -0.21
HMGA2-206ENST00000536545 BPY2O14599 106 aa13.76□□□□□ -0.21
HMGA2-206ENST00000536545 IGLV7-43P04211 117 aa13.73□□□□□ -0.21
HMGA2-206ENST00000536545 IGKV4-1P06312 121 aa13.73□□□□□ -0.21
HMGA2-206ENST00000536545 LCE6AA0A183 80 aa13.71□□□□□ -0.21
HMGA2-206ENST00000536545 Q8N9L7 120 aa13.71□□□□□ -0.21
HMGA2-206ENST00000536545 A0A087WSZ3 146 aa13.7□□□□□ -0.22
HMGA2-206ENST00000536545 COX7CP15954 63 aa13.68□□□□□ -0.22
HMGA2-206ENST00000536545 UQCRQO14949 82 aa13.66□□□□□ -0.22
HMGA2-206ENST00000536545 SERP2Q8N6R1 65 aa13.66□□□□□ -0.22
HMGA2-206ENST00000536545 IGLV9-49A0A0B4J1Y8 123 aa13.66□□□□□ -0.22
HMGA2-206ENST00000536545 C9orf153Q5TBE3 101 aa13.65□□□□□ -0.22
HMGA2-206ENST00000536545 RPL37AP61513 92 aaKnown RBP13.64□□□□□ -0.23
HMGA2-206ENST00000536545 DSCR10P59022 87 aa13.63□□□□□ -0.23
HMGA2-206ENST00000536545 ANAPC11Q9NYG5 84 aa13.6□□□□□ -0.23
HMGA2-206ENST00000536545 LRP1BQ9NZR2 4599 aa13.6□□□□□ -0.23
HMGA2-206ENST00000536545 LINC00336Q6ZUF6 198 aa13.59□□□□□ -0.23
HMGA2-206ENST00000536545 MOBPQ13875 183 aa13.58□□□□□ -0.24
HMGA2-206ENST00000536545 PKHD1P08F94 4074 aa13.56□□□□□ -0.24
HMGA2-206ENST00000536545 K7EQZ3 153 aa13.55□□□□□ -0.24
HMGA2-206ENST00000536545 SMIM20Q8N5G0 67 aa13.54□□□□□ -0.24
HMGA2-206ENST00000536545 TRAV7A0A075B6U4 112 aa13.53□□□□□ -0.24
HMGA2-206ENST00000536545 RYR2Q92736 4967 aa13.53□□□□□ -0.24
HMGA2-206ENST00000536545 DEFB116Q30KQ4 102 aa13.53□□□□□ -0.24
HMGA2-206ENST00000536545 LINC00472Q9H8W2 130 aa13.53□□□□□ -0.24
HMGA2-206ENST00000536545 A0A1B0GVY2 172 aa13.5□□□□□ -0.25
HMGA2-206ENST00000536545 DYNC1H1Q14204 4646 aaKnown RBP13.46□□□□□ -0.26
HMGA2-206ENST00000536545 HRCT1Q6UXD1 115 aa13.45□□□□□ -0.26
HMGA2-206ENST00000536545 VPS13BQ7Z7G8 4022 aa13.43□□□□□ -0.26
HMGA2-206ENST00000536545 Q96NJ1 140 aa13.43□□□□□ -0.26
HMGA2-206ENST00000536545 CYSTM1Q9H1C7 97 aa13.43□□□□□ -0.26
HMGA2-206ENST00000536545 OCR1Q9BZK8 76 aa13.42□□□□□ -0.26
HMGA2-206ENST00000536545 SS18L2Q9UHA2 77 aa13.42□□□□□ -0.26
HMGA2-206ENST00000536545 A8MWP4 228 aa13.41□□□□□ -0.26
HMGA2-206ENST00000536545 HCG22E2RYF7 251 aa13.41□□□□□ -0.26
HMGA2-206ENST00000536545 J3KT08 172 aa13.4□□□□□ -0.26
HMGA2-206ENST00000536545 PRR15Q8IV56 129 aa13.38□□□□□ -0.27
HMGA2-206ENST00000536545 KMT2CQ8NEZ4 4911 aaKnown RBP13.38□□□□□ -0.27
HMGA2-206ENST00000536545 FAM229BQ4G0N7 80 aa13.37□□□□□ -0.27
HMGA2-206ENST00000536545 SSBP3-AS1Q7Z2R9 100 aa13.37□□□□□ -0.27
HMGA2-206ENST00000536545 C20orf197Q8N268 126 aa13.36□□□□□ -0.27
HMGA2-206ENST00000536545 A0A087X002 238 aa13.35□□□□□ -0.27
HMGA2-206ENST00000536545 KRTAP1-4P0C5Y4 121 aa13.35□□□□□ -0.27
HMGA2-206ENST00000536545 CD164Q04900 197 aa13.35□□□□□ -0.27
HMGA2-206ENST00000536545 KRTAP13-2Q52LG2 175 aa13.33□□□□□ -0.28
HMGA2-206ENST00000536545 KRTAP29-1A8MX34 341 aaPredicted RBP13.31□□□□□ -0.28
HMGA2-206ENST00000536545 APOBP04114 4563 aaKnown RBP13.31□□□□□ -0.28
HMGA2-206ENST00000536545 KLKP1Q107X0 134 aa13.3□□□□□ -0.28
HMGA2-206ENST00000536545 WFDC13Q8IUB5 93 aa13.3□□□□□ -0.28
HMGA2-206ENST00000536545 NDUFB1O75438 58 aa13.25□□□□□ -0.29
HMGA2-206ENST00000536545 MMP24-AS1A0A0U1RRL7 71 aa13.25□□□□□ -0.29
HMGA2-206ENST00000536545 CASC2Q6XLA1 102 aa13.24□□□□□ -0.29
HMGA2-206ENST00000536545 TMEM254Q8TBM7 123 aa13.24□□□□□ -0.29
HMGA2-206ENST00000536545 SNURFQ9Y675 71 aa13.23□□□□□ -0.29
HMGA2-206ENST00000536545 SPINK6Q6UWN8 80 aa13.22□□□□□ -0.29
HMGA2-206ENST00000536545 TMEM258P61165 79 aa13.22□□□□□ -0.29
HMGA2-206ENST00000536545 ASB16-AS1Q495Z4 193 aa13.2□□□□□ -0.3
HMGA2-206ENST00000536545 A0A0U1RQV1 116 aa13.19□□□□□ -0.3
HMGA2-206ENST00000536545 A0A1B0GVX0 72 aa13.19□□□□□ -0.3
HMGA2-206ENST00000536545 SMR3BP02814 79 aaPredicted RBP13.19□□□□□ -0.3
HMGA2-206ENST00000536545 H7BZZ5 65 aa13.17□□□□□ -0.3
HMGA2-206ENST00000536545 PLA2G1BP04054 148 aaKnown RBP13.16□□□□□ -0.3
HMGA2-206ENST00000536545 CDK2AP2O75956 126 aa13.15□□□□□ -0.3
HMGA2-206ENST00000536545 KRTAP10-4P60372 401 aaPredicted RBP13.15□□□□□ -0.3
HMGA2-206ENST00000536545 Q5XG85 94 aa13.15□□□□□ -0.3
HMGA2-206ENST00000536545 C8orf17Q9NRJ1 99 aa13.15□□□□□ -0.3
HMGA2-206ENST00000536545 IGHV6-1A0A0B4J1U7 121 aa13.13□□□□□ -0.31
HMGA2-206ENST00000536545 hDV103S1A0JD37 113 aa13.13□□□□□ -0.31
HMGA2-206ENST00000536545 FAT1Q14517 4588 aa13.11□□□□□ -0.31
HMGA2-206ENST00000536545 NDUFC1O43677 76 aa13.11□□□□□ -0.31
HMGA2-206ENST00000536545 C5orf47Q569G3 176 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms