RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 SEC61BP60468 96 aaKnown RBP11.49□□□□□ -0.57
LTBR-205ENST00000535739 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
LTBR-205ENST00000535739 TRBV7-6A0A0J9YX20 115 aa11.48□□□□□ -0.57
LTBR-205ENST00000535739 VAMP3Q15836 100 aa11.48□□□□□ -0.57
LTBR-205ENST00000535739 COL5A1-AS1Q5SY13 56 aa11.47□□□□□ -0.57
LTBR-205ENST00000535739 SLC25A20O43772 301 aa11.46□□□□□ -0.57
LTBR-205ENST00000535739 COX7BP24311 80 aa11.46□□□□□ -0.57
LTBR-205ENST00000535739 PSMB2P49721 201 aa11.46□□□□□ -0.57
LTBR-205ENST00000535739 LINC01547P58512 204 aaPredicted RBP11.46□□□□□ -0.57
LTBR-205ENST00000535739 TAX1BP3O14907 124 aa11.44□□□□□ -0.58
LTBR-205ENST00000535739 TRIAP1O43715 76 aa11.44□□□□□ -0.58
LTBR-205ENST00000535739 ELOF1P60002 83 aaKnown RBP11.44□□□□□ -0.58
LTBR-205ENST00000535739 C9orf153Q5TBE3 101 aa11.43□□□□□ -0.58
LTBR-205ENST00000535739 H0YGX0 51 aa11.42□□□□□ -0.58
LTBR-205ENST00000535739 COX6CP09669 75 aa11.42□□□□□ -0.58
LTBR-205ENST00000535739 C9orf118A6NHY6 69 aa11.41□□□□□ -0.58
LTBR-205ENST00000535739 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
LTBR-205ENST00000535739 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
LTBR-205ENST00000535739 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.58
LTBR-205ENST00000535739 H3BUT2 72 aa11.39□□□□□ -0.59
LTBR-205ENST00000535739 XP32Q5T750 250 aa11.39□□□□□ -0.59
LTBR-205ENST00000535739 DHRS4-AS1Q9P1J3 65 aa11.39□□□□□ -0.59
LTBR-205ENST00000535739 LINC00575Q6W349 94 aa11.38□□□□□ -0.59
LTBR-205ENST00000535739 CLEC2BQ92478 149 aa11.34□□□□□ -0.59
LTBR-205ENST00000535739 hADV29S1A0JD25 119 aa11.33□□□□□ -0.6
LTBR-205ENST00000535739 SNCGO76070 127 aa11.33□□□□□ -0.6
LTBR-205ENST00000535739 FAM218AQ96MZ4 157 aa11.33□□□□□ -0.6
LTBR-205ENST00000535739 A0A1W2PPM0 123 aa11.32□□□□□ -0.6
LTBR-205ENST00000535739 LYRM7Q5U5X0 104 aa11.32□□□□□ -0.6
LTBR-205ENST00000535739 A0A1B0GX51 115 aa11.3□□□□□ -0.6
LTBR-205ENST00000535739 FABP2P12104 132 aa11.3□□□□□ -0.6
LTBR-205ENST00000535739 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
LTBR-205ENST00000535739 HRCT1Q6UXD1 115 aa11.29□□□□□ -0.6
LTBR-205ENST00000535739 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
LTBR-205ENST00000535739 LST1O00453 97 aa11.27□□□□□ -0.61
LTBR-205ENST00000535739 TCL1BO95988 128 aa11.27□□□□□ -0.61
LTBR-205ENST00000535739 SPRR1BP22528 89 aa11.27□□□□□ -0.61
LTBR-205ENST00000535739 TRBV20-1A0A075B6N2 111 aa11.26□□□□□ -0.61
LTBR-205ENST00000535739 ATXN8Q156A1 80 aa11.26□□□□□ -0.61
LTBR-205ENST00000535739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.25□□□□□ -0.61
LTBR-205ENST00000535739 LIMD2Q9BT23 127 aa11.25□□□□□ -0.61
LTBR-205ENST00000535739 TRACP01848 142 aa11.24□□□□□ -0.61
LTBR-205ENST00000535739 Q6ZQY7 126 aa11.24□□□□□ -0.61
LTBR-205ENST00000535739 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
LTBR-205ENST00000535739 DEFB105AQ8NG35 78 aa11.23□□□□□ -0.61
LTBR-205ENST00000535739 DNAL4O96015 105 aa11.22□□□□□ -0.61
LTBR-205ENST00000535739 KRTAP19-2Q3LHN2 52 aa11.22□□□□□ -0.61
LTBR-205ENST00000535739 PCOTHQ58A44 107 aa11.22□□□□□ -0.61
LTBR-205ENST00000535739 LAMTOR3Q9UHA4 124 aa11.22□□□□□ -0.61
LTBR-205ENST00000535739 SPCS1Q9Y6A9 102 aa11.22□□□□□ -0.61
LTBR-205ENST00000535739 OCIAD2Q56VL3 154 aa11.2□□□□□ -0.62
LTBR-205ENST00000535739 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
LTBR-205ENST00000535739 TEX49A0A1B0GTD5 131 aa11.19□□□□□ -0.62
LTBR-205ENST00000535739 FSIP2Q5CZC0 6907 aa11.18□□□□□ -0.62
LTBR-205ENST00000535739 IGLV8-61A0A075B6I0 122 aa11.18□□□□□ -0.62
LTBR-205ENST00000535739 GHRHP01286 108 aa11.17□□□□□ -0.62
LTBR-205ENST00000535739 ORMDL1Q9P0S3 153 aa11.17□□□□□ -0.62
LTBR-205ENST00000535739 H3BMG7 143 aa11.16□□□□□ -0.62
LTBR-205ENST00000535739 K7EP34 96 aa11.15□□□□□ -0.62
LTBR-205ENST00000535739 MT1HP80294 61 aa11.15□□□□□ -0.62
LTBR-205ENST00000535739 PPDPFLQ8WWR9 84 aa11.15□□□□□ -0.62
LTBR-205ENST00000535739 H3BQ85 93 aa11.14□□□□□ -0.63
LTBR-205ENST00000535739 CRCT1Q9UGL9 99 aa11.14□□□□□ -0.63
LTBR-205ENST00000535739 BAALC-AS2P0C853 105 aa11.13□□□□□ -0.63
LTBR-205ENST00000535739 CD164Q04900 197 aa11.13□□□□□ -0.63
LTBR-205ENST00000535739 GTF2H5Q6ZYL4 71 aa11.13□□□□□ -0.63
LTBR-205ENST00000535739 TMEM256-PLSCR3K7ERE1 68 aa11.12□□□□□ -0.63
LTBR-205ENST00000535739 C9JAW5 83 aa11.11□□□□□ -0.63
LTBR-205ENST00000535739 SMIM29Q86T20 159 aa11.11□□□□□ -0.63
LTBR-205ENST00000535739 A0A1B0GV90 55 aa11.09□□□□□ -0.63
LTBR-205ENST00000535739 A0A0G2JQZ4 141 aa11.08□□□□□ -0.64
LTBR-205ENST00000535739 UBE2V1Q13404 147 aa11.06□□□□□ -0.64
LTBR-205ENST00000535739 C1orf195Q5TG92 126 aa11.06□□□□□ -0.64
LTBR-205ENST00000535739 Q5XG85 94 aa11.06□□□□□ -0.64
LTBR-205ENST00000535739 NDUFV3P56181 108 aaKnown RBP11.05□□□□□ -0.64
LTBR-205ENST00000535739 MTURNQ8N3F0 131 aa11.05□□□□□ -0.64
LTBR-205ENST00000535739 F8WEM9 126 aa11.03□□□□□ -0.64
LTBR-205ENST00000535739 H3BT86 120 aa11.03□□□□□ -0.64
LTBR-205ENST00000535739 ANKRD29Q8N6D5 301 aa11.02□□□□□ -0.65
LTBR-205ENST00000535739 PRO0461Q9UI25 63 aa11.01□□□□□ -0.65
LTBR-205ENST00000535739 SMCPP49901 116 aaPredicted RBP10.99□□□□□ -0.65
LTBR-205ENST00000535739 F8W1H4 67 aa10.98□□□□□ -0.65
LTBR-205ENST00000535739 LORP23490 312 aaPredicted RBP10.98□□□□□ -0.65
LTBR-205ENST00000535739 KRTAP10-6P60371 365 aaPredicted RBP10.98□□□□□ -0.65
LTBR-205ENST00000535739 RPL37P61927 97 aaKnown RBP10.98□□□□□ -0.65
LTBR-205ENST00000535739 FLGP20930 4061 aaPredicted RBP10.98□□□□□ -0.65
LTBR-205ENST00000535739 A0A1B0GV72 72 aa10.95□□□□□ -0.66
LTBR-205ENST00000535739 RBM3P98179 157 aaKnown RBP10.94□□□□□ -0.66
LTBR-205ENST00000535739 Q6JHZ5 121 aa10.94□□□□□ -0.66
LTBR-205ENST00000535739 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
LTBR-205ENST00000535739 M0R2T5 61 aa10.92□□□□□ -0.66
LTBR-205ENST00000535739 OBSCN-AS1Q96MR7 158 aa10.91□□□□□ -0.66
LTBR-205ENST00000535739 IGFL1Q6UW32 110 aa10.9□□□□□ -0.66
LTBR-205ENST00000535739 COX6B2Q6YFQ2 88 aa10.9□□□□□ -0.66
LTBR-205ENST00000535739 DSCR8Q96T75 97 aa10.89□□□□□ -0.67
LTBR-205ENST00000535739 TRBV7-4A0A0J9YYF1 115 aa10.86□□□□□ -0.67
LTBR-205ENST00000535739 ETDBQ3ZM63 59 aa10.84□□□□□ -0.67
LTBR-205ENST00000535739 TEN1Q86WV5 123 aa10.84□□□□□ -0.67
LTBR-205ENST00000535739 C14orf132Q9NPU4 83 aa10.84□□□□□ -0.67
LTBR-205ENST00000535739 LOC110117498A0A087WWA1 95 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms