RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 Q8NDZ9 215 aa5.78□□□□□ -1.48
TNC-210ENST00000535648 LCE6AA0A183 80 aa5.78□□□□□ -1.48
TNC-210ENST00000535648 CFAP54Q96N23 3096 aa5.78□□□□□ -1.48
TNC-210ENST00000535648 R4GN34 69 aa5.77□□□□□ -1.49
TNC-210ENST00000535648 SPINK7P58062 85 aa5.77□□□□□ -1.49
TNC-210ENST00000535648 TRANK1O15050 2925 aa5.76□□□□□ -1.49
TNC-210ENST00000535648 SEC61BP60468 96 aaKnown RBP5.76□□□□□ -1.49
TNC-210ENST00000535648 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
TNC-210ENST00000535648 LAMA2P24043 3122 aaKnown RBP5.74□□□□□ -1.49
TNC-210ENST00000535648 FLNAP21333 2647 aaKnown RBP5.74□□□□□ -1.49
TNC-210ENST00000535648 A6NN06 94 aa5.74□□□□□ -1.49
TNC-210ENST00000535648 EPG5Q9HCE0 2579 aa5.73□□□□□ -1.49
TNC-210ENST00000535648 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
TNC-210ENST00000535648 XIRP2A4UGR9 3374 aa5.73□□□□□ -1.49
TNC-210ENST00000535648 A0A087X002 238 aa5.72□□□□□ -1.49
TNC-210ENST00000535648 MGAM2Q2M2H8 2515 aa5.71□□□□□ -1.5
TNC-210ENST00000535648 KRTAP26-1Q6PEX3 210 aa5.71□□□□□ -1.5
TNC-210ENST00000535648 ROMO1P60602 79 aa5.7□□□□□ -1.5
TNC-210ENST00000535648 Q6ZR54 194 aa5.7□□□□□ -1.5
TNC-210ENST00000535648 ITPR3Q14573 2671 aa5.7□□□□□ -1.5
TNC-210ENST00000535648 RPL37P61927 97 aaKnown RBP5.7□□□□□ -1.5
TNC-210ENST00000535648 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
TNC-210ENST00000535648 MKI67P46013 3256 aaKnown RBP5.68□□□□□ -1.5
TNC-210ENST00000535648 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
TNC-210ENST00000535648 CHD9Q3L8U1 2897 aa5.67□□□□□ -1.5
TNC-210ENST00000535648 KRTAP1-5Q9BYS1 174 aa5.66□□□□□ -1.5
TNC-210ENST00000535648 HECTD1Q9ULT8 2610 aa5.66□□□□□ -1.5
TNC-210ENST00000535648 M0QZ58 72 aa5.65□□□□□ -1.51
TNC-210ENST00000535648 AKAP13Q12802 2813 aa5.64□□□□□ -1.51
TNC-210ENST00000535648 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
TNC-210ENST00000535648 KRTAP10-1P60331 282 aa5.64□□□□□ -1.51
TNC-210ENST00000535648 ATRQ13535 2644 aa5.63□□□□□ -1.51
TNC-210ENST00000535648 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
TNC-210ENST00000535648 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
TNC-210ENST00000535648 HTTP42858 3142 aa5.61□□□□□ -1.51
TNC-210ENST00000535648 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
TNC-210ENST00000535648 ADM2Q7Z4H4 148 aa5.6□□□□□ -1.51
TNC-210ENST00000535648 PRUNE2Q8WUY3 3088 aa5.59□□□□□ -1.51
TNC-210ENST00000535648 FLNBO75369 2602 aaKnown RBP5.59□□□□□ -1.51
TNC-210ENST00000535648 HELZ2Q9BYK8 2649 aaKnown RBP5.58□□□□□ -1.52
TNC-210ENST00000535648 GCN1Q92616 2671 aaKnown RBP5.58□□□□□ -1.52
TNC-210ENST00000535648 CHD6Q8TD26 2715 aa5.57□□□□□ -1.52
TNC-210ENST00000535648 CFAP46Q8IYW2 2715 aa5.57□□□□□ -1.52
TNC-210ENST00000535648 MAST4O15021 2626 aa5.56□□□□□ -1.52
TNC-210ENST00000535648 BRCA2P51587 3418 aa5.56□□□□□ -1.52
TNC-210ENST00000535648 DSPP15924 2871 aaKnown RBP5.55□□□□□ -1.52
TNC-210ENST00000535648 CELSR3Q9NYQ7 3312 aa5.54□□□□□ -1.52
TNC-210ENST00000535648 FRYQ5TBA9 3013 aa5.54□□□□□ -1.52
TNC-210ENST00000535648 LAMA3Q16787 3333 aa5.54□□□□□ -1.52
TNC-210ENST00000535648 CENPEQ02224 2701 aa5.54□□□□□ -1.52
TNC-210ENST00000535648 UNC79Q9P2D8 2635 aa5.53□□□□□ -1.52
TNC-210ENST00000535648 PANO1I0J062 215 aa5.53□□□□□ -1.52
TNC-210ENST00000535648 VPS13AQ96RL7 3174 aa5.52□□□□□ -1.53
TNC-210ENST00000535648 TRIOO75962 3097 aa5.52□□□□□ -1.53
TNC-210ENST00000535648 NBEAQ8NFP9 2946 aa5.52□□□□□ -1.53
TNC-210ENST00000535648 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
TNC-210ENST00000535648 STAB1Q9NY15 2570 aa5.5□□□□□ -1.53
TNC-210ENST00000535648 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
TNC-210ENST00000535648 NBEAL1Q6ZS30 2694 aa5.48□□□□□ -1.53
TNC-210ENST00000535648 MGAQ8IWI9 3026 aa5.48□□□□□ -1.53
TNC-210ENST00000535648 ITPR1Q14643 2758 aa5.47□□□□□ -1.53
TNC-210ENST00000535648 KRTAP16-1A8MUX0 517 aa5.45□□□□□ -1.54
TNC-210ENST00000535648 A8MU10 97 aa5.45□□□□□ -1.54
TNC-210ENST00000535648 KALRNO60229 2985 aa5.45□□□□□ -1.54
TNC-210ENST00000535648 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
TNC-210ENST00000535648 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
TNC-210ENST00000535648 TEX15Q9BXT5 2789 aa5.43□□□□□ -1.54
TNC-210ENST00000535648 RANBP2P49792 3224 aaKnown RBP5.42□□□□□ -1.54
TNC-210ENST00000535648 DNAH14Q0VDD8 3507 aa5.42□□□□□ -1.54
TNC-210ENST00000535648 A8MUU9 505 aa5.42□□□□□ -1.54
TNC-210ENST00000535648 CDH23Q9H251 3354 aa5.42□□□□□ -1.54
TNC-210ENST00000535648 NBEAL2Q6ZNJ1 2754 aa5.4□□□□□ -1.55
TNC-210ENST00000535648 ZNF292O60281 2723 aa5.4□□□□□ -1.55
TNC-210ENST00000535648 KMT2BQ9UMN6 2715 aaPredicted RBP5.39□□□□□ -1.55
TNC-210ENST00000535648 KRTAP11-1Q8IUC1 163 aa5.38□□□□□ -1.55
TNC-210ENST00000535648 FREM2Q5SZK8 3169 aa5.37□□□□□ -1.55
TNC-210ENST00000535648 STAB2Q8WWQ8 2551 aa5.37□□□□□ -1.55
TNC-210ENST00000535648 LAMA1P25391 3075 aa5.37□□□□□ -1.55
TNC-210ENST00000535648 WDFY4Q6ZS81 3184 aa5.37□□□□□ -1.55
TNC-210ENST00000535648 Q6ZRN7 208 aaPredicted RBP5.37□□□□□ -1.55
TNC-210ENST00000535648 C20orf166-AS1Q96NR2 134 aa5.36□□□□□ -1.55
TNC-210ENST00000535648 REV3LO60673 3130 aa5.36□□□□□ -1.55
TNC-210ENST00000535648 MAP1AP78559 2803 aaPredicted RBP5.36□□□□□ -1.55
TNC-210ENST00000535648 NOTCH1P46531 2555 aa5.34□□□□□ -1.55
TNC-210ENST00000535648 APCP25054 2843 aa5.32□□□□□ -1.56
TNC-210ENST00000535648 UNC80Q8N2C7 3258 aa5.32□□□□□ -1.56
TNC-210ENST00000535648 TACC2O95359 2948 aa5.32□□□□□ -1.56
TNC-210ENST00000535648 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
TNC-210ENST00000535648 KRTAP13-1Q8IUC0 172 aa5.32□□□□□ -1.56
TNC-210ENST00000535648 KRTAP7-1Q8IUC3 87 aa5.32□□□□□ -1.56
TNC-210ENST00000535648 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
TNC-210ENST00000535648 SZT2Q5T011 3432 aa5.31□□□□□ -1.56
TNC-210ENST00000535648 SETXQ7Z333 2677 aaKnown RBP5.3□□□□□ -1.56
TNC-210ENST00000535648 ZZEF1O43149 2961 aa5.3□□□□□ -1.56
TNC-210ENST00000535648 BAHCC1Q9P281 2608 aa5.3□□□□□ -1.56
TNC-210ENST00000535648 LRBAP50851 2863 aa5.29□□□□□ -1.56
TNC-210ENST00000535648 TNP1P09430 55 aa5.28□□□□□ -1.56
TNC-210ENST00000535648 ITPR2Q14571 2701 aa5.27□□□□□ -1.57
TNC-210ENST00000535648 COL6A5A8TX70 2615 aa5.27□□□□□ -1.57
TNC-210ENST00000535648 TNRC18O15417 2968 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms