RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PCOTHQ58A44 107 aa10.18□□□□□ -0.78
MCF2L-232ENST00000535094 A8MUN3 132 aa10.18□□□□□ -0.78
MCF2L-232ENST00000535094 CHKB-CPT1BH3BT56 60 aa10.17□□□□□ -0.78
MCF2L-232ENST00000535094 SRRM2Q9UQ35 2752 aaKnown RBP10.17□□□□□ -0.78
MCF2L-232ENST00000535094 KMT2BQ9UMN6 2715 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-232ENST00000535094 IGLV9-49A0A0B4J1Y8 123 aa10.16□□□□□ -0.78
MCF2L-232ENST00000535094 hDV103S1A0JD37 113 aa10.16□□□□□ -0.78
MCF2L-232ENST00000535094 DNAH10OSP0CZ25 163 aa10.16□□□□□ -0.78
MCF2L-232ENST00000535094 NDUFB1O75438 58 aa10.15□□□□□ -0.79
MCF2L-232ENST00000535094 PHF5AQ7RTV0 110 aaKnown RBP10.15□□□□□ -0.79
MCF2L-232ENST00000535094 B9D2Q9BPU9 175 aa10.13□□□□□ -0.79
MCF2L-232ENST00000535094 PRR15LQ9BU68 103 aa10.13□□□□□ -0.79
MCF2L-232ENST00000535094 TRAV22A0A0B4J277 110 aa10.12□□□□□ -0.79
MCF2L-232ENST00000535094 F8WDY8 70 aa10.12□□□□□ -0.79
MCF2L-232ENST00000535094 CDK2AP2O75956 126 aa10.11□□□□□ -0.79
MCF2L-232ENST00000535094 TENM2Q9NT68 2774 aa10.11□□□□□ -0.79
MCF2L-232ENST00000535094 KRTAP24-1Q3LI83 254 aa10.1□□□□□ -0.79
MCF2L-232ENST00000535094 PMAIP1Q13794 54 aa10.1□□□□□ -0.79
MCF2L-232ENST00000535094 ANK3Q12955 4377 aaKnown RBP10.09□□□□□ -0.79
MCF2L-232ENST00000535094 SPRR4Q96PI1 79 aa10.08□□□□□ -0.8
MCF2L-232ENST00000535094 A6NED7 52 aa10.07□□□□□ -0.8
MCF2L-232ENST00000535094 A0A1B0GW54 56 aa10.06□□□□□ -0.8
MCF2L-232ENST00000535094 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
MCF2L-232ENST00000535094 KRTAP7-1Q8IUC3 87 aa10.05□□□□□ -0.8
MCF2L-232ENST00000535094 TNP2Q05952 138 aa10.05□□□□□ -0.8
MCF2L-232ENST00000535094 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
MCF2L-232ENST00000535094 KRTAP4-16G5E9R7 235 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-232ENST00000535094 SPRR1AP35321 89 aa10.03□□□□□ -0.8
MCF2L-232ENST00000535094 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
MCF2L-232ENST00000535094 IGHV6-1A0A0B4J1U7 121 aa10.02□□□□□ -0.81
MCF2L-232ENST00000535094 SEC61GP60059 68 aa10.01□□□□□ -0.81
MCF2L-232ENST00000535094 C16orf90A8MZG2 172 aa9.99□□□□□ -0.81
MCF2L-232ENST00000535094 PRR15Q8IV56 129 aa9.98□□□□□ -0.81
MCF2L-232ENST00000535094 SPAG11AQ6PDA7 123 aa9.97□□□□□ -0.81
MCF2L-232ENST00000535094 IGLV5-37A0A075B6J1 123 aa9.97□□□□□ -0.81
MCF2L-232ENST00000535094 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
MCF2L-232ENST00000535094 A8MU10 97 aa9.96□□□□□ -0.81
MCF2L-232ENST00000535094 A8MWP4 228 aa9.94□□□□□ -0.82
MCF2L-232ENST00000535094 Q1T7F1 81 aa9.94□□□□□ -0.82
MCF2L-232ENST00000535094 COL7A1Q02388 2944 aa9.94□□□□□ -0.82
MCF2L-232ENST00000535094 ZCCHC13Q8WW36 166 aaKnown RBP9.93□□□□□ -0.82
MCF2L-232ENST00000535094 KRTAP1-5Q9BYS1 174 aa9.93□□□□□ -0.82
MCF2L-232ENST00000535094 ANAPC11Q9NYG5 84 aa9.93□□□□□ -0.82
MCF2L-232ENST00000535094 C14orf177Q52M58 125 aa9.92□□□□□ -0.82
MCF2L-232ENST00000535094 CNBPP62633 177 aaKnown RBP9.92□□□□□ -0.82
MCF2L-232ENST00000535094 COA5Q86WW8 74 aa9.91□□□□□ -0.82
MCF2L-232ENST00000535094 KRTAP11-1Q8IUC1 163 aa9.89□□□□□ -0.83
MCF2L-232ENST00000535094 K7EIL1 84 aa9.89□□□□□ -0.83
MCF2L-232ENST00000535094 CYP4F30PQ9H0H9 118 aa9.89□□□□□ -0.83
MCF2L-232ENST00000535094 LIMD2Q9BT23 127 aa9.88□□□□□ -0.83
MCF2L-232ENST00000535094 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
MCF2L-232ENST00000535094 MOBPQ13875 183 aa9.87□□□□□ -0.83
MCF2L-232ENST00000535094 LCE6AA0A183 80 aa9.84□□□□□ -0.83
MCF2L-232ENST00000535094 Q5VV11 94 aa9.83□□□□□ -0.84
MCF2L-232ENST00000535094 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
MCF2L-232ENST00000535094 CIRBP-AS1Q8TBR5 109 aa9.81□□□□□ -0.84
MCF2L-232ENST00000535094 LINC00472Q9H8W2 130 aa9.8□□□□□ -0.84
MCF2L-232ENST00000535094 KRTAP29-1A8MX34 341 aaPredicted RBP9.79□□□□□ -0.84
MCF2L-232ENST00000535094 H3BPC8 53 aa9.79□□□□□ -0.84
MCF2L-232ENST00000535094 PANO1I0J062 215 aa9.78□□□□□ -0.84
MCF2L-232ENST00000535094 MDFIQ99750 246 aa9.78□□□□□ -0.84
MCF2L-232ENST00000535094 MMP24-AS1A0A0U1RRL7 71 aa9.77□□□□□ -0.84
MCF2L-232ENST00000535094 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
MCF2L-232ENST00000535094 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
MCF2L-232ENST00000535094 SPANXA2-OT1Q8N9U9 137 aa9.75□□□□□ -0.85
MCF2L-232ENST00000535094 IGLV8-61A0A075B6I0 122 aa9.74□□□□□ -0.85
MCF2L-232ENST00000535094 CD164Q04900 197 aa9.73□□□□□ -0.85
MCF2L-232ENST00000535094 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
MCF2L-232ENST00000535094 PRR26Q8N8Z3 221 aa9.72□□□□□ -0.85
MCF2L-232ENST00000535094 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.85
MCF2L-232ENST00000535094 TP53AIP1Q9HCN2 124 aa9.71□□□□□ -0.85
MCF2L-232ENST00000535094 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
MCF2L-232ENST00000535094 MRPL34Q9BQ48 92 aaKnown RBP9.69□□□□□ -0.86
MCF2L-232ENST00000535094 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
MCF2L-232ENST00000535094 A0A1B0GVX0 72 aa9.68□□□□□ -0.86
MCF2L-232ENST00000535094 ZNF706Q9Y5V0 76 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-232ENST00000535094 TGP01266 2768 aa9.67□□□□□ -0.86
MCF2L-232ENST00000535094 A0A087X002 238 aa9.65□□□□□ -0.86
MCF2L-232ENST00000535094 NOTCH2NLQ7Z3S9 236 aa9.65□□□□□ -0.86
MCF2L-232ENST00000535094 LCA10Q71F78 164 aa9.65□□□□□ -0.87
MCF2L-232ENST00000535094 PSORS1C2Q9UIG4 136 aa9.64□□□□□ -0.87
MCF2L-232ENST00000535094 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
MCF2L-232ENST00000535094 SPRR1BP22528 89 aa9.63□□□□□ -0.87
MCF2L-232ENST00000535094 ATP11AUNQ6ZP68 121 aa9.62□□□□□ -0.87
MCF2L-232ENST00000535094 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
MCF2L-232ENST00000535094 LY6G6CO95867 125 aa9.61□□□□□ -0.87
MCF2L-232ENST00000535094 SPINK7P58062 85 aa9.61□□□□□ -0.87
MCF2L-232ENST00000535094 RTL8CO15255 209 aa9.6□□□□□ -0.87
MCF2L-232ENST00000535094 HRES1P13985 223 aa9.6□□□□□ -0.87
MCF2L-232ENST00000535094 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
MCF2L-232ENST00000535094 NUPR2A6NF83 97 aa9.59□□□□□ -0.87
MCF2L-232ENST00000535094 Q75L30 129 aa9.58□□□□□ -0.88
MCF2L-232ENST00000535094 IGKV2D-30A0A075B6S6 120 aa9.55□□□□□ -0.88
MCF2L-232ENST00000535094 IGKV2-30P06310 120 aa9.55□□□□□ -0.88
MCF2L-232ENST00000535094 SPINK1P00995 79 aa9.55□□□□□ -0.88
MCF2L-232ENST00000535094 CDC42SE1Q9NRR8 79 aa9.55□□□□□ -0.88
MCF2L-232ENST00000535094 RBM12B-AS1Q9P1G2 102 aa9.53□□□□□ -0.88
MCF2L-232ENST00000535094 A0A087WTM6 91 aa9.53□□□□□ -0.88
MCF2L-232ENST00000535094 ZNF861PO60384 105 aa9.53□□□□□ -0.88
MCF2L-232ENST00000535094 ACYP2P14621 99 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms