RNA–Protein interactions for RNA: ENST00000535081.1

SYNE1-232, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 561 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-232ENST00000535081 CNBPP62633 177 aaKnown RBP1.37□□□□□ -2.19
SYNE1-232ENST00000535081 HBG1P69891 147 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 HBG2P69892 147 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 MRPS36P82909 103 aaKnown RBP1.37□□□□□ -2.19
SYNE1-232ENST00000535081 SERF2P84101 59 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 CIRBPQ14011 172 aaKnown RBP1.37□□□□□ -2.19
SYNE1-232ENST00000535081 C10orf113Q5VZT2 155 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 SDIM1Q6ZPB5 146 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 LINC00305Q7Z4B0 112 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 FAM19A2Q8N3H0 131 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 SPACA4Q8TDM5 124 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 BRK1Q8WUW1 75 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 MGST2Q99735 147 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 OTORQ9NRC9 128 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 PLAC8Q9NZF1 115 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 ANAPC10Q9UM13 185 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 DNAH8Q96JB1 4490 aa1.37□□□□□ -2.19
SYNE1-232ENST00000535081 IGKV1D-37A0A075B6S9 117 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 IGHV3-73A0A0B4J1V6 119 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 IGHV1-58A0A0C4DH39 117 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 TRBV7-6A0A0J9YX20 115 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 CTXND1A0A1B0GTU2 59 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 hADV29S1A0JD25 119 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 ACYP1P07311 99 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 ZNF22P17026 224 aaPredicted RBP1.36□□□□□ -2.19
SYNE1-232ENST00000535081 GCHFRP30047 84 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 FXYD2P54710 66 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 UBE2D3P61077 147 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 HIST1H4AP62805 103 aaKnown RBP1.36□□□□□ -2.19
SYNE1-232ENST00000535081 UBE2D2P62837 147 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 UBE2L3P68036 154 aaKnown RBP1.36□□□□□ -2.19
SYNE1-232ENST00000535081 COX6A2Q02221 97 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 PDE6HQ13956 83 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 C1orf137Q5JT78 98 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 TMEM170BQ5T4T1 132 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 SCGB1D4Q6XE38 83 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 C5orf38Q86SI9 138 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 DSCR8Q96T75 97 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 C11orf1Q9H5F2 150 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 NHP2Q9NX24 153 aaKnown RBP1.36□□□□□ -2.19
SYNE1-232ENST00000535081 RBM12B-AS1Q9P1G2 102 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 TP73-AS1Q9UF72 201 aa1.36□□□□□ -2.19
SYNE1-232ENST00000535081 TRAV21A0A0B4J279 112 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 MYMXA0A1B0GTQ4 84 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 UBE2L5PA0A1B0GUS4 154 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 K7ERJ3 54 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 NPYP01303 97 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 TCRAP04437 139 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 IAPPP10997 89 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 S100A4P26447 101 aaKnown RBP1.35□□□□□ -2.19
SYNE1-232ENST00000535081 ATP5EP56381 51 aaPredicted RBP1.35□□□□□ -2.19
SYNE1-232ENST00000535081 ZNF56Q15929 161 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 PCOTHQ58A44 107 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 SPANXN5Q5MJ07 72 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 ATP5L2Q7Z4Y8 100 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 KTN1-AS1Q86SY8 53 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 LINC00643Q86TS7 51 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 SERP2Q8N6R1 65 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 NXT2Q9NPJ8 142 aaKnown RBP1.35□□□□□ -2.19
SYNE1-232ENST00000535081 OSTCQ9NRP0 149 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 EPDR1Q9UM22 224 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 PHLDA3Q9Y5J5 127 aa1.35□□□□□ -2.19
SYNE1-232ENST00000535081 LPAP08519 4548 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 TRBV7-3A0A075B6L6 115 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 TRBV25-1A0A075B6N4 114 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 SMIM27A0A1W2PRY6 76 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 C19orf71A6NCJ1 209 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 C8orf87E5RJ46 101 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 M0R2T5 61 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 UBE2L6O14933 153 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 SLC25A20O43772 301 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 FAM74A4Q5TZK3 123 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 CLPSL2Q6UWE3 100 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 ENHOQ6UWT2 76 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 FP248Q71RG6 208 aaPredicted RBP1.34□□□□□ -2.19
SYNE1-232ENST00000535081 LINC00269Q8N2A0 174 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 OR5C1Q8NGR4 320 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 IFI27L1Q96BM0 104 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 LENEPQ9Y5L5 61 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 V9GYV3 84 aa1.34□□□□□ -2.19
SYNE1-232ENST00000535081 IGKV2-40A0A087WW87 121 aaPredicted RBP1.33□□□□□ -2.2
SYNE1-232ENST00000535081 TMSB15BA0A087X1C1 80 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 A0A096LNI7 61 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 TRBV6-8A0A0A6YYG3 113 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 TRBV10-1A0A0K0K1A3 114 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 TRBV10-2A0A0K0K1G8 114 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 A0A1B0GXF2 115 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 H3BP45 60 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 H3BVH4 76 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 M0R3E3 92 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 GNRH2O43555 120 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 TIMM17BO60830 172 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 IGKV2D-40P01614 121 aaPredicted RBP1.33□□□□□ -2.2
SYNE1-232ENST00000535081 HBDP02042 147 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 UBE2BP63146 152 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 ATXN8Q156A1 80 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 TPRXLQ17RH7 258 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 CENPWQ5EE01 88 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 ZFAND2AQ8N6M9 145 aa1.33□□□□□ -2.2
SYNE1-232ENST00000535081 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms