RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
CTNND1-238ENST00000534647 IGLV6-57P01721 117 aa6.8□□□□□ -1.32
CTNND1-238ENST00000534647 TRACP01848 142 aa6.8□□□□□ -1.32
CTNND1-238ENST00000534647 MUC2Q02817 5179 aa6.8□□□□□ -1.32
CTNND1-238ENST00000534647 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
CTNND1-238ENST00000534647 TRBV10-3A0A0K0K1G6 114 aa6.79□□□□□ -1.32
CTNND1-238ENST00000534647 SLC25A20O43772 301 aa6.79□□□□□ -1.32
CTNND1-238ENST00000534647 DNAL4O96015 105 aa6.79□□□□□ -1.32
CTNND1-238ENST00000534647 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
CTNND1-238ENST00000534647 PRO0461Q9UI25 63 aa6.79□□□□□ -1.32
CTNND1-238ENST00000534647 V9GYY9 64 aa6.79□□□□□ -1.32
CTNND1-238ENST00000534647 CRYGAP11844 174 aa6.78□□□□□ -1.32
CTNND1-238ENST00000534647 C6orf99Q4VX62 202 aa6.78□□□□□ -1.32
CTNND1-238ENST00000534647 A0A087X002 238 aa6.77□□□□□ -1.33
CTNND1-238ENST00000534647 H3BT86 120 aa6.77□□□□□ -1.33
CTNND1-238ENST00000534647 BCE1O60756 84 aa6.77□□□□□ -1.33
CTNND1-238ENST00000534647 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
CTNND1-238ENST00000534647 A0A1B0GX51 115 aa6.76□□□□□ -1.33
CTNND1-238ENST00000534647 ZNF73O43830 326 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-238ENST00000534647 ANKRD29Q8N6D5 301 aa6.76□□□□□ -1.33
CTNND1-238ENST00000534647 TYMSOSQ8TAI1 123 aa6.76□□□□□ -1.33
CTNND1-238ENST00000534647 COX7BP24311 80 aa6.75□□□□□ -1.33
CTNND1-238ENST00000534647 ETDBQ3ZM63 59 aa6.75□□□□□ -1.33
CTNND1-238ENST00000534647 PRAC1Q96KF2 57 aa6.75□□□□□ -1.33
CTNND1-238ENST00000534647 TRBV7-6A0A0J9YX20 115 aa6.74□□□□□ -1.33
CTNND1-238ENST00000534647 J3QR89 54 aa6.73□□□□□ -1.33
CTNND1-238ENST00000534647 K7ERU9 68 aa6.73□□□□□ -1.33
CTNND1-238ENST00000534647 FAM229BQ4G0N7 80 aa6.73□□□□□ -1.33
CTNND1-238ENST00000534647 TEN1Q86WV5 123 aa6.73□□□□□ -1.33
CTNND1-238ENST00000534647 KRTAP13-1Q8IUC0 172 aa6.73□□□□□ -1.33
CTNND1-238ENST00000534647 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
CTNND1-238ENST00000534647 hADV29S1A0JD25 119 aa6.72□□□□□ -1.33
CTNND1-238ENST00000534647 BAALC-AS2P0C853 105 aa6.72□□□□□ -1.33
CTNND1-238ENST00000534647 OCIAD2Q56VL3 154 aa6.72□□□□□ -1.33
CTNND1-238ENST00000534647 LINC00575Q6W349 94 aa6.72□□□□□ -1.33
CTNND1-238ENST00000534647 ORMDL1Q9P0S3 153 aa6.72□□□□□ -1.33
CTNND1-238ENST00000534647 TPRXLQ17RH7 258 aa6.71□□□□□ -1.34
CTNND1-238ENST00000534647 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
CTNND1-238ENST00000534647 PPDPFLQ8WWR9 84 aa6.71□□□□□ -1.34
CTNND1-238ENST00000534647 KCNQ1DNQ9H478 68 aa6.71□□□□□ -1.34
CTNND1-238ENST00000534647 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
CTNND1-238ENST00000534647 RPL37AP8A6NKH3 93 aa6.7□□□□□ -1.34
CTNND1-238ENST00000534647 ELOF1P60002 83 aaKnown RBP6.7□□□□□ -1.34
CTNND1-238ENST00000534647 H3BQ85 93 aa6.69□□□□□ -1.34
CTNND1-238ENST00000534647 ANAPC11Q9NYG5 84 aa6.69□□□□□ -1.34
CTNND1-238ENST00000534647 LINC00304Q8N9R0 145 aa6.68□□□□□ -1.34
CTNND1-238ENST00000534647 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-238ENST00000534647 TMEM256-PLSCR3K7ERE1 68 aa6.66□□□□□ -1.34
CTNND1-238ENST00000534647 UBE2AP49459 152 aa6.66□□□□□ -1.34
CTNND1-238ENST00000534647 RETNLBQ9BQ08 111 aa6.66□□□□□ -1.34
CTNND1-238ENST00000534647 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
CTNND1-238ENST00000534647 IGLV7-46A0A075B6I9 117 aa6.65□□□□□ -1.34
CTNND1-238ENST00000534647 KRTAP9-6A0A140TA67 174 aa6.65□□□□□ -1.34
CTNND1-238ENST00000534647 Q6ZQY7 126 aa6.65□□□□□ -1.34
CTNND1-238ENST00000534647 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
CTNND1-238ENST00000534647 SPRR1AP35321 89 aa6.64□□□□□ -1.35
CTNND1-238ENST00000534647 Q6ZRX8 168 aa6.63□□□□□ -1.35
CTNND1-238ENST00000534647 JMJD7-PLA2G4BH0Y9G9 81 aa6.62□□□□□ -1.35
CTNND1-238ENST00000534647 FAM19A1Q7Z5A9 133 aa6.62□□□□□ -1.35
CTNND1-238ENST00000534647 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
CTNND1-238ENST00000534647 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-238ENST00000534647 NDUFV3P56181 108 aaKnown RBP6.61□□□□□ -1.35
CTNND1-238ENST00000534647 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
CTNND1-238ENST00000534647 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
CTNND1-238ENST00000534647 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
CTNND1-238ENST00000534647 PRLHP81277 87 aa6.6□□□□□ -1.35
CTNND1-238ENST00000534647 FP248Q71RG6 208 aaPredicted RBP6.59□□□□□ -1.35
CTNND1-238ENST00000534647 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
CTNND1-238ENST00000534647 A0A1B0GV72 72 aa6.57□□□□□ -1.36
CTNND1-238ENST00000534647 DEFB105AQ8NG35 78 aa6.57□□□□□ -1.36
CTNND1-238ENST00000534647 OBSCN-AS1Q96MR7 158 aa6.57□□□□□ -1.36
CTNND1-238ENST00000534647 Q9BRP9 147 aa6.57□□□□□ -1.36
CTNND1-238ENST00000534647 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
CTNND1-238ENST00000534647 RBM3P98179 157 aaKnown RBP6.56□□□□□ -1.36
CTNND1-238ENST00000534647 C3orf22Q8N5N4 141 aa6.56□□□□□ -1.36
CTNND1-238ENST00000534647 ACYP1P07311 99 aa6.55□□□□□ -1.36
CTNND1-238ENST00000534647 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
CTNND1-238ENST00000534647 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
CTNND1-238ENST00000534647 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
CTNND1-238ENST00000534647 LINC01547P58512 204 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-238ENST00000534647 KRTAP13-3Q3SY46 172 aa6.54□□□□□ -1.36
CTNND1-238ENST00000534647 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
CTNND1-238ENST00000534647 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
CTNND1-238ENST00000534647 DSCR8Q96T75 97 aa6.54□□□□□ -1.36
CTNND1-238ENST00000534647 PDE6GP18545 87 aa6.53□□□□□ -1.36
CTNND1-238ENST00000534647 IGLV5-48A0A075B6I7 105 aa6.52□□□□□ -1.37
CTNND1-238ENST00000534647 ERC2-IT1O76042 136 aa6.52□□□□□ -1.37
CTNND1-238ENST00000534647 ST20-AS1Q8NBB2 130 aa6.52□□□□□ -1.37
CTNND1-238ENST00000534647 ZNF706Q9Y5V0 76 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-238ENST00000534647 F8WEM9 126 aa6.51□□□□□ -1.37
CTNND1-238ENST00000534647 SPINK1P00995 79 aa6.51□□□□□ -1.37
CTNND1-238ENST00000534647 CCKP06307 115 aa6.51□□□□□ -1.37
CTNND1-238ENST00000534647 Q8N377 158 aa6.51□□□□□ -1.37
CTNND1-238ENST00000534647 LOC110117498A0A087WWA1 95 aa6.5□□□□□ -1.37
CTNND1-238ENST00000534647 SMIM29Q86T20 159 aa6.49□□□□□ -1.37
CTNND1-238ENST00000534647 Q8NBF4 154 aa6.49□□□□□ -1.37
CTNND1-238ENST00000534647 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
CTNND1-238ENST00000534647 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
CTNND1-238ENST00000534647 Q6ZQT0 140 aa6.48□□□□□ -1.37
CTNND1-238ENST00000534647 LINC00483Q53H64 154 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms