RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 CEP170BQ9Y4F5 1589 aaPredicted RBP0.87□□□□□ -2.27
ME3-211ENST00000534638 FAM186AA6NE01 2351 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 USP32Q8NFA0 1604 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 CPSF4LA6NMK7 179 aaKnown RBP0.86□□□□□ -2.27
ME3-211ENST00000534638 I3L3M4 83 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 HEPN1Q6WQI6 88 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 HILPDAQ9Y5L2 63 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 FRYLO94915 3013 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 VPS13CQ709C8 3753 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 DMDP11532 3685 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 PTPN23Q9H3S7 1636 aa0.86□□□□□ -2.27
ME3-211ENST00000534638 OTOGQ6ZRI0 2925 aa0.85□□□□□ -2.27
ME3-211ENST00000534638 FCGBPQ9Y6R7 5405 aaPredicted RBP0.85□□□□□ -2.27
ME3-211ENST00000534638 PREX1Q8TCU6 1659 aa0.85□□□□□ -2.27
ME3-211ENST00000534638 SONP18583 2426 aaKnown RBP0.85□□□□□ -2.27
ME3-211ENST00000534638 ITPR2Q14571 2701 aa0.85□□□□□ -2.27
ME3-211ENST00000534638 COX6B1P14854 86 aa0.85□□□□□ -2.27
ME3-211ENST00000534638 NREPQ16612 68 aa0.85□□□□□ -2.27
ME3-211ENST00000534638 COL12A1Q99715 3063 aa0.85□□□□□ -2.27
ME3-211ENST00000534638 NKTRP30414 1462 aaKnown RBP0.85□□□□□ -2.27
ME3-211ENST00000534638 FRAS1Q86XX4 4008 aa0.85□□□□□ -2.27
ME3-211ENST00000534638 CACNA1EQ15878 2313 aa0.84□□□□□ -2.27
ME3-211ENST00000534638 LRRC37AA6NMS7 1700 aa0.84□□□□□ -2.27
ME3-211ENST00000534638 DIP2AQ14689 1571 aa0.84□□□□□ -2.27
ME3-211ENST00000534638 SPRR1BP22528 89 aa0.84□□□□□ -2.27
ME3-211ENST00000534638 SPRR1AP35321 89 aa0.84□□□□□ -2.27
ME3-211ENST00000534638 KRTAP20-1Q3LI63 56 aa0.84□□□□□ -2.27
ME3-211ENST00000534638 APCP25054 2843 aa0.84□□□□□ -2.28
ME3-211ENST00000534638 CPS1P31327 1500 aa0.84□□□□□ -2.28
ME3-211ENST00000534638 DUOX2Q9NRD8 1548 aa0.84□□□□□ -2.28
ME3-211ENST00000534638 DSPP15924 2871 aaKnown RBP0.83□□□□□ -2.28
ME3-211ENST00000534638 PTPRQQ9UMZ3 2332 aa0.83□□□□□ -2.28
ME3-211ENST00000534638 SCN11AQ9UI33 1791 aa0.83□□□□□ -2.28
ME3-211ENST00000534638 DMXL1Q9Y485 3027 aa0.83□□□□□ -2.28
ME3-211ENST00000534638 HMGA1P17096 107 aaKnown RBP0.83□□□□□ -2.28
ME3-211ENST00000534638 PRO3102Q9H379 93 aa0.83□□□□□ -2.28
ME3-211ENST00000534638 APLNQ9ULZ1 77 aa0.83□□□□□ -2.28
ME3-211ENST00000534638 HMCN2Q8NDA2 5059 aa0.83□□□□□ -2.28
ME3-211ENST00000534638 COL14A1Q05707 1796 aaKnown RBP0.83□□□□□ -2.28
ME3-211ENST00000534638 ARFGEF2Q9Y6D5 1785 aa0.83□□□□□ -2.28
ME3-211ENST00000534638 CSMD2Q7Z408 3487 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 WNK1Q9H4A3 2382 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 DOT1LQ8TEK3 1739 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 COX8AP10176 69 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 MRPL34Q9BQ48 92 aaKnown RBP0.82□□□□□ -2.28
ME3-211ENST00000534638 FXYD6Q9H0Q3 95 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 FREM2Q5SZK8 3169 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 ANK2Q01484 3957 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 RNF213Q63HN8 5207 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 CUBNO60494 3623 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 CHD9Q3L8U1 2897 aa0.82□□□□□ -2.28
ME3-211ENST00000534638 DMBT1Q9UGM3 2413 aaPredicted RBP0.81□□□□□ -2.28
ME3-211ENST00000534638 CLIP1P30622 1438 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 HIVEP1P15822 2718 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 SVEP1Q4LDE5 3571 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 POLR1AO95602 1720 aaPredicted RBP0.81□□□□□ -2.28
ME3-211ENST00000534638 CCDC141Q6ZP82 1450 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 SMIM31A0A1B0GVY4 71 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 KRTAP2-3P0C7H8 128 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 KLK9Q2XQG4 91 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 SPINK6Q6UWN8 80 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 KRTAP2-4Q9BYR9 128 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 WIZO95785 1651 aa0.81□□□□□ -2.28
ME3-211ENST00000534638 ADAMTS12P58397 1594 aa0.8□□□□□ -2.28
ME3-211ENST00000534638 RPL38P63173 70 aaKnown RBP0.8□□□□□ -2.28
ME3-211ENST00000534638 LELP1Q5T871 98 aa0.8□□□□□ -2.28
ME3-211ENST00000534638 ZNF469Q96JG9 3925 aaPredicted RBP0.8□□□□□ -2.28
ME3-211ENST00000534638 QSER1Q2KHR3 1735 aa0.8□□□□□ -2.28
ME3-211ENST00000534638 DMXL2Q8TDJ6 3036 aa0.8□□□□□ -2.28
ME3-211ENST00000534638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.8□□□□□ -2.28
ME3-211ENST00000534638 SPTBN1Q01082 2364 aaKnown RBP0.79□□□□□ -2.28
ME3-211ENST00000534638 ZC3H13Q5T200 1668 aaKnown RBP0.79□□□□□ -2.28
ME3-211ENST00000534638 CENPEQ02224 2701 aa0.79□□□□□ -2.28
ME3-211ENST00000534638 Q5VSD8 79 aa0.79□□□□□ -2.28
ME3-211ENST00000534638 GNG13Q9P2W3 67 aa0.79□□□□□ -2.28
ME3-211ENST00000534638 TSC2P49815 1807 aa0.79□□□□□ -2.28
ME3-211ENST00000534638 CD163L1Q9NR16 1453 aa0.79□□□□□ -2.28
ME3-211ENST00000534638 MAP1AP78559 2803 aaPredicted RBP0.79□□□□□ -2.28
ME3-211ENST00000534638 KMT2AQ03164 3969 aa0.78□□□□□ -2.28
ME3-211ENST00000534638 LAMA5O15230 3695 aa0.78□□□□□ -2.28
ME3-211ENST00000534638 COL7A1Q02388 2944 aa0.78□□□□□ -2.28
ME3-211ENST00000534638 KMT2DO14686 5537 aa0.78□□□□□ -2.28
ME3-211ENST00000534638 DEFB105AQ8NG35 78 aa0.78□□□□□ -2.28
ME3-211ENST00000534638 TNCP24821 2201 aa0.78□□□□□ -2.28
ME3-211ENST00000534638 ACANP16112 2415 aa0.78□□□□□ -2.28
ME3-211ENST00000534638 TIAM2Q8IVF5 1701 aa0.78□□□□□ -2.29
ME3-211ENST00000534638 MUC5ACP98088 5654 aa0.78□□□□□ -2.29
ME3-211ENST00000534638 LCE6AA0A183 80 aa0.77□□□□□ -2.29
ME3-211ENST00000534638 NDUFA4O00483 81 aa0.77□□□□□ -2.29
ME3-211ENST00000534638 PRH1P02810 166 aa0.77□□□□□ -2.29
ME3-211ENST00000534638 H1FX-AS1Q4G0G2 97 aa0.77□□□□□ -2.29
ME3-211ENST00000534638 RNF17Q9BXT8 1623 aaKnown RBP0.77□□□□□ -2.29
ME3-211ENST00000534638 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
ME3-211ENST00000534638 MAGI3Q5TCQ9 1506 aa0.76□□□□□ -2.29
ME3-211ENST00000534638 MDN1Q9NU22 5596 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 BCORQ6W2J9 1755 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 ASXL1Q8IXJ9 1541 aa0.75□□□□□ -2.29
ME3-211ENST00000534638 ATMQ13315 3056 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms