RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
UBXN1-216ENST00000533908 IGFL1Q6UW32 110 aa9.32□□□□□ -0.92
UBXN1-216ENST00000533908 LINC00575Q6W349 94 aa9.32□□□□□ -0.92
UBXN1-216ENST00000533908 F8WEM9 126 aa9.31□□□□□ -0.92
UBXN1-216ENST00000533908 Q75L30 129 aa9.31□□□□□ -0.92
UBXN1-216ENST00000533908 COA6Q5JTJ3 125 aaKnown RBP9.3□□□□□ -0.92
UBXN1-216ENST00000533908 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
UBXN1-216ENST00000533908 Q6ZQY7 126 aa9.3□□□□□ -0.92
UBXN1-216ENST00000533908 KRTAP9-8Q9BYQ0 159 aa9.3□□□□□ -0.92
UBXN1-216ENST00000533908 Q6JHZ5 121 aa9.29□□□□□ -0.92
UBXN1-216ENST00000533908 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.28□□□□□ -0.92
UBXN1-216ENST00000533908 OCIAD2Q56VL3 154 aa9.28□□□□□ -0.92
UBXN1-216ENST00000533908 CLEC2BQ92478 149 aa9.28□□□□□ -0.92
UBXN1-216ENST00000533908 hADV29S1A0JD25 119 aa9.26□□□□□ -0.93
UBXN1-216ENST00000533908 KRTAP9-7A8MTY7 169 aa9.26□□□□□ -0.93
UBXN1-216ENST00000533908 VAMP3Q15836 100 aa9.26□□□□□ -0.93
UBXN1-216ENST00000533908 C20orf202A1L168 122 aa9.24□□□□□ -0.93
UBXN1-216ENST00000533908 USH2AO75445 5202 aa9.24□□□□□ -0.93
UBXN1-216ENST00000533908 SSPOA2VEC9 5147 aa9.23□□□□□ -0.93
UBXN1-216ENST00000533908 Q96NJ1 140 aa9.22□□□□□ -0.93
UBXN1-216ENST00000533908 H3BUT2 72 aa9.19□□□□□ -0.94
UBXN1-216ENST00000533908 LST1O00453 97 aa9.18□□□□□ -0.94
UBXN1-216ENST00000533908 CFC1P0CG37 223 aa9.18□□□□□ -0.94
UBXN1-216ENST00000533908 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.18□□□□□ -0.94
UBXN1-216ENST00000533908 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
UBXN1-216ENST00000533908 A8MUU9 505 aa9.16□□□□□ -0.94
UBXN1-216ENST00000533908 SNHG12Q9BXW3 62 aa9.15□□□□□ -0.94
UBXN1-216ENST00000533908 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
UBXN1-216ENST00000533908 PPDPFLQ8WWR9 84 aa9.13□□□□□ -0.95
UBXN1-216ENST00000533908 C12orf57Q99622 126 aa9.12□□□□□ -0.95
UBXN1-216ENST00000533908 MT2AP02795 61 aa9.11□□□□□ -0.95
UBXN1-216ENST00000533908 KRTAP16-1A8MUX0 517 aa9.1□□□□□ -0.95
UBXN1-216ENST00000533908 SCGB1D1O95968 90 aa9.08□□□□□ -0.96
UBXN1-216ENST00000533908 BVES-AS1Q5T3Y7 98 aa9.08□□□□□ -0.96
UBXN1-216ENST00000533908 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
UBXN1-216ENST00000533908 LCE2BO14633 110 aa9.07□□□□□ -0.96
UBXN1-216ENST00000533908 DSCR10P59022 87 aa9.06□□□□□ -0.96
UBXN1-216ENST00000533908 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
UBXN1-216ENST00000533908 MT1FP04733 61 aa9.05□□□□□ -0.96
UBXN1-216ENST00000533908 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
UBXN1-216ENST00000533908 FCGBPQ9Y6R7 5405 aaPredicted RBP9.04□□□□□ -0.96
UBXN1-216ENST00000533908 A0A087WSZ3 146 aa9.04□□□□□ -0.96
UBXN1-216ENST00000533908 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
UBXN1-216ENST00000533908 NDUFV3P56181 108 aaKnown RBP9.03□□□□□ -0.96
UBXN1-216ENST00000533908 KRTAP19-1Q8IUB9 90 aa9.03□□□□□ -0.96
UBXN1-216ENST00000533908 HIST3H2BBQ8N257 126 aa9.03□□□□□ -0.96
UBXN1-216ENST00000533908 FAM218AQ96MZ4 157 aa9.02□□□□□ -0.97
UBXN1-216ENST00000533908 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
UBXN1-216ENST00000533908 HSBP1L1C9JCN9 74 aa9.01□□□□□ -0.97
UBXN1-216ENST00000533908 HIST1H4GQ99525 98 aa9.01□□□□□ -0.97
UBXN1-216ENST00000533908 MPLKIPQ8TAP9 179 aa8.98□□□□□ -0.97
UBXN1-216ENST00000533908 A0A1W2PNM2 257 aa8.97□□□□□ -0.97
UBXN1-216ENST00000533908 H3BMG7 143 aa8.96□□□□□ -0.98
UBXN1-216ENST00000533908 HRES1P13985 223 aa8.96□□□□□ -0.98
UBXN1-216ENST00000533908 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
UBXN1-216ENST00000533908 FAM236DA0A1B0GTK5 79 aa8.95□□□□□ -0.98
UBXN1-216ENST00000533908 FAM236CP0DP71 79 aa8.95□□□□□ -0.98
UBXN1-216ENST00000533908 H0YGX0 51 aa8.94□□□□□ -0.98
UBXN1-216ENST00000533908 COX8AP10176 69 aa8.94□□□□□ -0.98
UBXN1-216ENST00000533908 S100A2P29034 98 aa8.94□□□□□ -0.98
UBXN1-216ENST00000533908 LINC00313P59037 77 aa8.94□□□□□ -0.98
UBXN1-216ENST00000533908 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
UBXN1-216ENST00000533908 SIGMAR1Q99720 223 aa8.93□□□□□ -0.98
UBXN1-216ENST00000533908 SNCGO76070 127 aa8.9□□□□□ -0.98
UBXN1-216ENST00000533908 FABP2P12104 132 aa8.9□□□□□ -0.98
UBXN1-216ENST00000533908 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
UBXN1-216ENST00000533908 DLEU1O43261 78 aa8.89□□□□□ -0.99
UBXN1-216ENST00000533908 IGKV4-1P06312 121 aa8.89□□□□□ -0.99
UBXN1-216ENST00000533908 A0A0B4J2C4 111 aa8.88□□□□□ -0.99
UBXN1-216ENST00000533908 DEFB116Q30KQ4 102 aa8.87□□□□□ -0.99
UBXN1-216ENST00000533908 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
UBXN1-216ENST00000533908 C14orf144Q96I85 54 aa8.86□□□□□ -0.99
UBXN1-216ENST00000533908 A0A1B0GX51 115 aa8.84□□□□□ -0.99
UBXN1-216ENST00000533908 LINC00472Q9H8W2 130 aa8.84□□□□□ -0.99
UBXN1-216ENST00000533908 HIGD1BQ9P298 99 aa8.83□□□□□ -1
UBXN1-216ENST00000533908 MACF1Q9UPN3 7388 aaKnown RBP8.83□□□□□ -1
UBXN1-216ENST00000533908 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
UBXN1-216ENST00000533908 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
UBXN1-216ENST00000533908 ANKRD29Q8N6D5 301 aa8.82□□□□□ -1
UBXN1-216ENST00000533908 A0A1B0GV72 72 aa8.8□□□□□ -1
UBXN1-216ENST00000533908 PRO1854Q9UHT4 67 aa8.8□□□□□ -1
UBXN1-216ENST00000533908 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
UBXN1-216ENST00000533908 GHRHP01286 108 aa8.79□□□□□ -1
UBXN1-216ENST00000533908 TRIAP1O43715 76 aa8.78□□□□□ -1
UBXN1-216ENST00000533908 S100A6P06703 90 aa8.78□□□□□ -1
UBXN1-216ENST00000533908 SYNE2Q8WXH0 6885 aaKnown RBP8.78□□□□□ -1
UBXN1-216ENST00000533908 CEND1Q8N111 149 aa8.77□□□□□ -1.01
UBXN1-216ENST00000533908 KRTAP19-6Q3LI70 58 aa8.76□□□□□ -1.01
UBXN1-216ENST00000533908 PAM16Q9Y3D7 125 aa8.75□□□□□ -1.01
UBXN1-216ENST00000533908 FXYD2P54710 66 aa8.74□□□□□ -1.01
UBXN1-216ENST00000533908 SPATA45Q537H7 98 aa8.74□□□□□ -1.01
UBXN1-216ENST00000533908 CCKP06307 115 aa8.73□□□□□ -1.01
UBXN1-216ENST00000533908 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
UBXN1-216ENST00000533908 SPINK7P58062 85 aa8.71□□□□□ -1.02
UBXN1-216ENST00000533908 TRACP01848 142 aa8.7□□□□□ -1.02
UBXN1-216ENST00000533908 A0A1B0GVX0 72 aa8.69□□□□□ -1.02
UBXN1-216ENST00000533908 ZCCHC13Q8WW36 166 aaKnown RBP8.69□□□□□ -1.02
UBXN1-216ENST00000533908 MTURNQ8N3F0 131 aa8.68□□□□□ -1.02
UBXN1-216ENST00000533908 TMEM238LA0A1B0GVL6 79 aa8.67□□□□□ -1.02
UBXN1-216ENST00000533908 A6NJY4 79 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms