RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 Q6ZQY7 126 aa9.51□□□□□ -0.89
PCF11-206ENST00000533018 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
PCF11-206ENST00000533018 M0R2T5 61 aa9.49□□□□□ -0.89
PCF11-206ENST00000533018 S100A2P29034 98 aa9.49□□□□□ -0.89
PCF11-206ENST00000533018 CRCT1Q9UGL9 99 aa9.48□□□□□ -0.89
PCF11-206ENST00000533018 Q6JHZ5 121 aa9.47□□□□□ -0.89
PCF11-206ENST00000533018 CLEC2BQ92478 149 aa9.46□□□□□ -0.9
PCF11-206ENST00000533018 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
PCF11-206ENST00000533018 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
PCF11-206ENST00000533018 TRBV7-7A0A0K0K1E9 115 aa9.44□□□□□ -0.9
PCF11-206ENST00000533018 OCIAD2Q56VL3 154 aa9.44□□□□□ -0.9
PCF11-206ENST00000533018 IGFL1Q6UW32 110 aa9.44□□□□□ -0.9
PCF11-206ENST00000533018 C12orf57Q99622 126 aa9.44□□□□□ -0.9
PCF11-206ENST00000533018 SNHG12Q9BXW3 62 aa9.42□□□□□ -0.9
PCF11-206ENST00000533018 KRTAP10-6P60371 365 aaPredicted RBP9.41□□□□□ -0.9
PCF11-206ENST00000533018 BVES-AS1Q5T3Y7 98 aa9.41□□□□□ -0.9
PCF11-206ENST00000533018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.41□□□□□ -0.9
PCF11-206ENST00000533018 HIST1H4GQ99525 98 aa9.41□□□□□ -0.9
PCF11-206ENST00000533018 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
PCF11-206ENST00000533018 OBSCN-AS1Q96MR7 158 aa9.4□□□□□ -0.9
PCF11-206ENST00000533018 S100A6P06703 90 aa9.39□□□□□ -0.91
PCF11-206ENST00000533018 ATP11AUNQ6ZP68 121 aa9.38□□□□□ -0.91
PCF11-206ENST00000533018 H3BUT2 72 aa9.37□□□□□ -0.91
PCF11-206ENST00000533018 SCGB1D1O95968 90 aa9.37□□□□□ -0.91
PCF11-206ENST00000533018 Q6Q795 121 aa9.37□□□□□ -0.91
PCF11-206ENST00000533018 PPDPFLQ8WWR9 84 aa9.37□□□□□ -0.91
PCF11-206ENST00000533018 FLGP20930 4061 aaPredicted RBP9.37□□□□□ -0.91
PCF11-206ENST00000533018 LST1O00453 97 aa9.36□□□□□ -0.91
PCF11-206ENST00000533018 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
PCF11-206ENST00000533018 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
PCF11-206ENST00000533018 SNCGO76070 127 aa9.32□□□□□ -0.92
PCF11-206ENST00000533018 COX8AP10176 69 aa9.32□□□□□ -0.92
PCF11-206ENST00000533018 Q75L30 129 aa9.32□□□□□ -0.92
PCF11-206ENST00000533018 Q96NJ1 140 aa9.32□□□□□ -0.92
PCF11-206ENST00000533018 RAB37Q96AX2 223 aa9.31□□□□□ -0.92
PCF11-206ENST00000533018 SS18L2Q9UHA2 77 aa9.29□□□□□ -0.92
PCF11-206ENST00000533018 CFC1P0CG37 223 aa9.28□□□□□ -0.92
PCF11-206ENST00000533018 C14orf144Q96I85 54 aa9.26□□□□□ -0.93
PCF11-206ENST00000533018 H0YGX0 51 aa9.25□□□□□ -0.93
PCF11-206ENST00000533018 DLEU1O43261 78 aa9.25□□□□□ -0.93
PCF11-206ENST00000533018 NDUFV3P56181 108 aaKnown RBP9.24□□□□□ -0.93
PCF11-206ENST00000533018 TEN1Q86WV5 123 aa9.24□□□□□ -0.93
PCF11-206ENST00000533018 S100A1P23297 94 aa9.23□□□□□ -0.93
PCF11-206ENST00000533018 FAM218AQ96MZ4 157 aa9.23□□□□□ -0.93
PCF11-206ENST00000533018 A0A087WSZ3 146 aa9.22□□□□□ -0.93
PCF11-206ENST00000533018 A0A0B4J2C4 111 aa9.21□□□□□ -0.94
PCF11-206ENST00000533018 H3BMG7 143 aa9.21□□□□□ -0.94
PCF11-206ENST00000533018 FABP2P12104 132 aa9.21□□□□□ -0.94
PCF11-206ENST00000533018 PAM16Q9Y3D7 125 aa9.21□□□□□ -0.94
PCF11-206ENST00000533018 GHRHP01286 108 aa9.2□□□□□ -0.94
PCF11-206ENST00000533018 SPATA45Q537H7 98 aa9.19□□□□□ -0.94
PCF11-206ENST00000533018 HIGD1BQ9P298 99 aa9.19□□□□□ -0.94
PCF11-206ENST00000533018 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
PCF11-206ENST00000533018 TRBV20-1A0A075B6N2 111 aa9.16□□□□□ -0.94
PCF11-206ENST00000533018 A8MUU9 505 aa9.16□□□□□ -0.94
PCF11-206ENST00000533018 DSCR10P59022 87 aa9.15□□□□□ -0.94
PCF11-206ENST00000533018 CEND1Q8N111 149 aa9.15□□□□□ -0.94
PCF11-206ENST00000533018 VAMP8Q9BV40 100 aa9.15□□□□□ -0.94
PCF11-206ENST00000533018 PRO1854Q9UHT4 67 aa9.15□□□□□ -0.94
PCF11-206ENST00000533018 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
PCF11-206ENST00000533018 A0A1B0GX51 115 aa9.14□□□□□ -0.95
PCF11-206ENST00000533018 A6NJY4 79 aa9.14□□□□□ -0.95
PCF11-206ENST00000533018 C2orf91Q6ZV80 131 aa9.14□□□□□ -0.95
PCF11-206ENST00000533018 SIGMAR1Q99720 223 aa9.14□□□□□ -0.95
PCF11-206ENST00000533018 A0A1B0GV72 72 aa9.11□□□□□ -0.95
PCF11-206ENST00000533018 A0A1W2PNM2 257 aa9.1□□□□□ -0.95
PCF11-206ENST00000533018 TRIAP1O43715 76 aa9.09□□□□□ -0.95
PCF11-206ENST00000533018 DNAL4O96015 105 aa9.09□□□□□ -0.95
PCF11-206ENST00000533018 LINC00313P59037 77 aa9.09□□□□□ -0.95
PCF11-206ENST00000533018 ANKRD29Q8N6D5 301 aa9.09□□□□□ -0.95
PCF11-206ENST00000533018 IGKV4-1P06312 121 aa9.08□□□□□ -0.96
PCF11-206ENST00000533018 FXYD2P54710 66 aa9.08□□□□□ -0.96
PCF11-206ENST00000533018 PSMB2P49721 201 aa9.06□□□□□ -0.96
PCF11-206ENST00000533018 ORMDL1Q9P0S3 153 aa9.06□□□□□ -0.96
PCF11-206ENST00000533018 TRBV7-4A0A0J9YYF1 115 aa9.04□□□□□ -0.96
PCF11-206ENST00000533018 FAM236DA0A1B0GTK5 79 aa9.04□□□□□ -0.96
PCF11-206ENST00000533018 FAM236CP0DP71 79 aa9.04□□□□□ -0.96
PCF11-206ENST00000533018 DEFB116Q30KQ4 102 aa9.03□□□□□ -0.96
PCF11-206ENST00000533018 USH2AO75445 5202 aa9.03□□□□□ -0.96
PCF11-206ENST00000533018 H3BQ85 93 aa9.02□□□□□ -0.97
PCF11-206ENST00000533018 SSPOA2VEC9 5147 aa9□□□□□ -0.97
PCF11-206ENST00000533018 KRTAP16-1A8MUX0 517 aa9□□□□□ -0.97
PCF11-206ENST00000533018 TMEM256-PLSCR3K7ERE1 68 aa9□□□□□ -0.97
PCF11-206ENST00000533018 COX6CP09669 75 aa9□□□□□ -0.97
PCF11-206ENST00000533018 KRTAP9-8Q9BYQ0 159 aa9□□□□□ -0.97
PCF11-206ENST00000533018 K7ERJ3 54 aa8.99□□□□□ -0.97
PCF11-206ENST00000533018 TRACP01848 142 aa8.99□□□□□ -0.97
PCF11-206ENST00000533018 CCKP06307 115 aa8.99□□□□□ -0.97
PCF11-206ENST00000533018 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
PCF11-206ENST00000533018 IGHV6-1A0A0B4J1U7 121 aa8.98□□□□□ -0.97
PCF11-206ENST00000533018 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
PCF11-206ENST00000533018 HSD52Q0P140 79 aa8.97□□□□□ -0.97
PCF11-206ENST00000533018 VPS25Q9BRG1 176 aa8.96□□□□□ -0.98
PCF11-206ENST00000533018 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
PCF11-206ENST00000533018 UBE2V1Q13404 147 aa8.92□□□□□ -0.98
PCF11-206ENST00000533018 SCGB1C2P0DMR2 95 aa8.89□□□□□ -0.99
PCF11-206ENST00000533018 HRES1P13985 223 aa8.89□□□□□ -0.99
PCF11-206ENST00000533018 MT2AP02795 61 aa8.88□□□□□ -0.99
PCF11-206ENST00000533018 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
PCF11-206ENST00000533018 PYY3Q5JQD4 70 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1050.5 ms