RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 TEX49A0A1B0GTD5 131 aa12.66□□□□□ -0.38
LTBP3-220ENST00000532661 LIMD2Q9BT23 127 aa12.66□□□□□ -0.38
LTBP3-220ENST00000532661 A0A1B0GWB2 263 aa12.65□□□□□ -0.38
LTBP3-220ENST00000532661 SMIM29Q86T20 159 aa12.65□□□□□ -0.38
LTBP3-220ENST00000532661 LINC01547P58512 204 aaPredicted RBP12.64□□□□□ -0.39
LTBP3-220ENST00000532661 BATFQ16520 125 aa12.64□□□□□ -0.39
LTBP3-220ENST00000532661 SNHG12Q9BXW3 62 aa12.64□□□□□ -0.39
LTBP3-220ENST00000532661 NHP2Q9NX24 153 aaKnown RBP12.64□□□□□ -0.39
LTBP3-220ENST00000532661 A0A0B4J2C4 111 aa12.62□□□□□ -0.39
LTBP3-220ENST00000532661 CFC1BP0CG36 223 aa12.62□□□□□ -0.39
LTBP3-220ENST00000532661 CFC1P0CG37 223 aa12.62□□□□□ -0.39
LTBP3-220ENST00000532661 IGLV5-48A0A075B6I7 105 aa12.6□□□□□ -0.39
LTBP3-220ENST00000532661 A0A0G2JQZ4 141 aa12.6□□□□□ -0.39
LTBP3-220ENST00000532661 H7C2G1 150 aa12.6□□□□□ -0.39
LTBP3-220ENST00000532661 SMIM11BQ8TCY0 68 aa12.6□□□□□ -0.39
LTBP3-220ENST00000532661 TRAV13-2A0A0B4J235 113 aa12.59□□□□□ -0.39
LTBP3-220ENST00000532661 CD164Q04900 197 aa12.59□□□□□ -0.39
LTBP3-220ENST00000532661 RAB37Q96AX2 223 aa12.59□□□□□ -0.39
LTBP3-220ENST00000532661 C9orf92A6NGG3 77 aa12.58□□□□□ -0.4
LTBP3-220ENST00000532661 K7ERJ3 54 aa12.56□□□□□ -0.4
LTBP3-220ENST00000532661 PRO1854Q9UHT4 67 aa12.56□□□□□ -0.4
LTBP3-220ENST00000532661 COL5A1-AS1Q5SY13 56 aa12.53□□□□□ -0.4
LTBP3-220ENST00000532661 PCOTHQ58A44 107 aa12.51□□□□□ -0.41
LTBP3-220ENST00000532661 Q5XG85 94 aa12.5□□□□□ -0.41
LTBP3-220ENST00000532661 C1orf195Q5TG92 126 aa12.49□□□□□ -0.41
LTBP3-220ENST00000532661 TAX1BP3O14907 124 aa12.46□□□□□ -0.41
LTBP3-220ENST00000532661 VAMP3Q15836 100 aa12.45□□□□□ -0.42
LTBP3-220ENST00000532661 LCE2CQ5TA81 110 aa12.45□□□□□ -0.42
LTBP3-220ENST00000532661 LINC00575Q6W349 94 aa12.45□□□□□ -0.42
LTBP3-220ENST00000532661 IGLV8-61A0A075B6I0 122 aa12.44□□□□□ -0.42
LTBP3-220ENST00000532661 C9orf118A6NHY6 69 aa12.41□□□□□ -0.42
LTBP3-220ENST00000532661 KRTAP19-2Q3LHN2 52 aa12.41□□□□□ -0.42
LTBP3-220ENST00000532661 Q6ZQY7 126 aa12.41□□□□□ -0.42
LTBP3-220ENST00000532661 hADV29S1A0JD25 119 aa12.4□□□□□ -0.42
LTBP3-220ENST00000532661 F8WEM9 126 aa12.38□□□□□ -0.43
LTBP3-220ENST00000532661 PSMB2P49721 201 aa12.38□□□□□ -0.43
LTBP3-220ENST00000532661 H3BUT2 72 aa12.37□□□□□ -0.43
LTBP3-220ENST00000532661 TRIAP1O43715 76 aa12.37□□□□□ -0.43
LTBP3-220ENST00000532661 NAA38Q9BRA0 125 aaKnown RBP12.36□□□□□ -0.43
LTBP3-220ENST00000532661 TCL1BO95988 128 aa12.35□□□□□ -0.43
LTBP3-220ENST00000532661 COX6CP09669 75 aa12.35□□□□□ -0.43
LTBP3-220ENST00000532661 LYRM7Q5U5X0 104 aa12.33□□□□□ -0.44
LTBP3-220ENST00000532661 KRTAP9-6A0A140TA67 174 aa12.32□□□□□ -0.44
LTBP3-220ENST00000532661 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
LTBP3-220ENST00000532661 IGFL1Q6UW32 110 aa12.32□□□□□ -0.44
LTBP3-220ENST00000532661 SCGB1C2P0DMR2 95 aa12.31□□□□□ -0.44
LTBP3-220ENST00000532661 RPL37P61927 97 aaKnown RBP12.31□□□□□ -0.44
LTBP3-220ENST00000532661 H0YGX0 51 aa12.3□□□□□ -0.44
LTBP3-220ENST00000532661 OCIAD2Q56VL3 154 aa12.3□□□□□ -0.44
LTBP3-220ENST00000532661 FABP2P12104 132 aa12.29□□□□□ -0.44
LTBP3-220ENST00000532661 Q6JHZ5 121 aa12.29□□□□□ -0.44
LTBP3-220ENST00000532661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.29□□□□□ -0.44
LTBP3-220ENST00000532661 MT1HP80294 61 aa12.28□□□□□ -0.44
LTBP3-220ENST00000532661 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
LTBP3-220ENST00000532661 TRBV7-7A0A0K0K1E9 115 aa12.27□□□□□ -0.45
LTBP3-220ENST00000532661 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
LTBP3-220ENST00000532661 TRBV20-1A0A075B6N2 111 aa12.23□□□□□ -0.45
LTBP3-220ENST00000532661 A0A1B0GX51 115 aa12.22□□□□□ -0.45
LTBP3-220ENST00000532661 SPCS1Q9Y6A9 102 aa12.22□□□□□ -0.45
LTBP3-220ENST00000532661 LST1O00453 97 aa12.21□□□□□ -0.45
LTBP3-220ENST00000532661 PPDPFLQ8WWR9 84 aa12.21□□□□□ -0.45
LTBP3-220ENST00000532661 FAM218AQ96MZ4 157 aa12.21□□□□□ -0.45
LTBP3-220ENST00000532661 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
LTBP3-220ENST00000532661 SNCGO76070 127 aa12.19□□□□□ -0.46
LTBP3-220ENST00000532661 K7EP34 96 aa12.18□□□□□ -0.46
LTBP3-220ENST00000532661 A0A1B0GV90 55 aa12.17□□□□□ -0.46
LTBP3-220ENST00000532661 TRACP01848 142 aa12.17□□□□□ -0.46
LTBP3-220ENST00000532661 GTF2H5Q6ZYL4 71 aa12.15□□□□□ -0.46
LTBP3-220ENST00000532661 OBSCN-AS1Q96MR7 158 aa12.13□□□□□ -0.47
LTBP3-220ENST00000532661 DNAL4O96015 105 aa12.12□□□□□ -0.47
LTBP3-220ENST00000532661 H3BMG7 143 aa12.11□□□□□ -0.47
LTBP3-220ENST00000532661 COX6B2Q6YFQ2 88 aa12.08□□□□□ -0.48
LTBP3-220ENST00000532661 NDUFV3P56181 108 aaKnown RBP12.07□□□□□ -0.48
LTBP3-220ENST00000532661 LORP23490 312 aaPredicted RBP12.06□□□□□ -0.48
LTBP3-220ENST00000532661 KRTAP10-6P60371 365 aaPredicted RBP12.06□□□□□ -0.48
LTBP3-220ENST00000532661 C9JAW5 83 aa12.05□□□□□ -0.48
LTBP3-220ENST00000532661 UBE2V1Q13404 147 aa12.05□□□□□ -0.48
LTBP3-220ENST00000532661 Q6Q795 121 aa12.05□□□□□ -0.48
LTBP3-220ENST00000532661 Q75L30 129 aa12.05□□□□□ -0.48
LTBP3-220ENST00000532661 ORMDL1Q9P0S3 153 aa12.05□□□□□ -0.48
LTBP3-220ENST00000532661 GHRHP01286 108 aa12.04□□□□□ -0.48
LTBP3-220ENST00000532661 FSIP2Q5CZC0 6907 aa12.04□□□□□ -0.48
LTBP3-220ENST00000532661 H3BQ85 93 aa12.03□□□□□ -0.48
LTBP3-220ENST00000532661 ATP11AUNQ6ZP68 121 aa12.03□□□□□ -0.48
LTBP3-220ENST00000532661 TEN1Q86WV5 123 aa12.03□□□□□ -0.48
LTBP3-220ENST00000532661 FLGP20930 4061 aaPredicted RBP12.02□□□□□ -0.48
LTBP3-220ENST00000532661 M0R2T5 61 aa12.02□□□□□ -0.49
LTBP3-220ENST00000532661 Q96NJ1 140 aa12.02□□□□□ -0.49
LTBP3-220ENST00000532661 SS18L2Q9UHA2 77 aa12.01□□□□□ -0.49
LTBP3-220ENST00000532661 H3BT86 120 aa12□□□□□ -0.49
LTBP3-220ENST00000532661 A0A087WSZ3 146 aa11.99□□□□□ -0.49
LTBP3-220ENST00000532661 BAALC-AS2P0C853 105 aa11.99□□□□□ -0.49
LTBP3-220ENST00000532661 CRCT1Q9UGL9 99 aa11.99□□□□□ -0.49
LTBP3-220ENST00000532661 PRO0461Q9UI25 63 aa11.99□□□□□ -0.49
LTBP3-220ENST00000532661 TMEM256-PLSCR3K7ERE1 68 aa11.98□□□□□ -0.49
LTBP3-220ENST00000532661 MTURNQ8N3F0 131 aa11.98□□□□□ -0.49
LTBP3-220ENST00000532661 F8W1H4 67 aa11.97□□□□□ -0.49
LTBP3-220ENST00000532661 ANKRD29Q8N6D5 301 aa11.95□□□□□ -0.5
LTBP3-220ENST00000532661 A0A1W2PNM2 257 aa11.93□□□□□ -0.5
LTBP3-220ENST00000532661 SMCPP49901 116 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms