RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 NOTCH1P46531 2555 aa8.23□□□□□ -1.09
GRAMD1B-208ENST00000532581 A0A0G2JQZ4 141 aa8.22□□□□□ -1.09
GRAMD1B-208ENST00000532581 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
GRAMD1B-208ENST00000532581 K7EIL1 84 aa8.22□□□□□ -1.09
GRAMD1B-208ENST00000532581 KRTAP1-5Q9BYS1 174 aa8.22□□□□□ -1.09
GRAMD1B-208ENST00000532581 BAHCC1Q9P281 2608 aa8.21□□□□□ -1.1
GRAMD1B-208ENST00000532581 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.2□□□□□ -1.1
GRAMD1B-208ENST00000532581 A0A087WSZ3 146 aa8.2□□□□□ -1.1
GRAMD1B-208ENST00000532581 DNAH10Q8IVF4 4471 aa8.2□□□□□ -1.1
GRAMD1B-208ENST00000532581 UBE2AP49459 152 aa8.19□□□□□ -1.1
GRAMD1B-208ENST00000532581 hDV103S1A0JD37 113 aa8.18□□□□□ -1.1
GRAMD1B-208ENST00000532581 DEFB116Q30KQ4 102 aa8.18□□□□□ -1.1
GRAMD1B-208ENST00000532581 H0Y9J4 135 aa8.17□□□□□ -1.1
GRAMD1B-208ENST00000532581 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
GRAMD1B-208ENST00000532581 SPRR1BP22528 89 aa8.17□□□□□ -1.1
GRAMD1B-208ENST00000532581 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
GRAMD1B-208ENST00000532581 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
GRAMD1B-208ENST00000532581 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.11
GRAMD1B-208ENST00000532581 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
GRAMD1B-208ENST00000532581 NDUFB1O75438 58 aa8.14□□□□□ -1.11
GRAMD1B-208ENST00000532581 KRTAP11-1Q8IUC1 163 aa8.14□□□□□ -1.11
GRAMD1B-208ENST00000532581 UBE2DNLQ8IWF7 75 aa8.14□□□□□ -1.11
GRAMD1B-208ENST00000532581 C1orf64Q8NEQ6 169 aa8.14□□□□□ -1.11
GRAMD1B-208ENST00000532581 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
GRAMD1B-208ENST00000532581 KRTAP29-1A8MX34 341 aaPredicted RBP8.14□□□□□ -1.11
GRAMD1B-208ENST00000532581 CHTF8P0CG12 524 aa8.13□□□□□ -1.11
GRAMD1B-208ENST00000532581 MP68P56378 58 aa8.13□□□□□ -1.11
GRAMD1B-208ENST00000532581 RPL37AP61513 92 aaKnown RBP8.12□□□□□ -1.11
GRAMD1B-208ENST00000532581 PRR15Q8IV56 129 aa8.11□□□□□ -1.11
GRAMD1B-208ENST00000532581 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
GRAMD1B-208ENST00000532581 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
GRAMD1B-208ENST00000532581 A8MWP4 228 aa8.1□□□□□ -1.11
GRAMD1B-208ENST00000532581 PSPHP1O15172 72 aa8.1□□□□□ -1.11
GRAMD1B-208ENST00000532581 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
GRAMD1B-208ENST00000532581 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
GRAMD1B-208ENST00000532581 LYSTQ99698 3801 aa8.09□□□□□ -1.11
GRAMD1B-208ENST00000532581 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
GRAMD1B-208ENST00000532581 B9D2Q9BPU9 175 aa8.09□□□□□ -1.11
GRAMD1B-208ENST00000532581 DYNC2H1Q8NCM8 4307 aaKnown RBP8.09□□□□□ -1.12
GRAMD1B-208ENST00000532581 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
GRAMD1B-208ENST00000532581 Q1T7F1 81 aa8.08□□□□□ -1.12
GRAMD1B-208ENST00000532581 H3BPC8 53 aa8.08□□□□□ -1.12
GRAMD1B-208ENST00000532581 COL6A5A8TX70 2615 aa8.08□□□□□ -1.12
GRAMD1B-208ENST00000532581 PRR4Q16378 134 aa8.07□□□□□ -1.12
GRAMD1B-208ENST00000532581 LINC00208Q96KT6 92 aa8.07□□□□□ -1.12
GRAMD1B-208ENST00000532581 A8MU10 97 aa8.06□□□□□ -1.12
GRAMD1B-208ENST00000532581 H0Y9P7 68 aa8.05□□□□□ -1.12
GRAMD1B-208ENST00000532581 STAB2Q8WWQ8 2551 aa8.05□□□□□ -1.12
GRAMD1B-208ENST00000532581 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
GRAMD1B-208ENST00000532581 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
GRAMD1B-208ENST00000532581 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
GRAMD1B-208ENST00000532581 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
GRAMD1B-208ENST00000532581 NBDYA0A0U1RRE5 68 aa8.01□□□□□ -1.13
GRAMD1B-208ENST00000532581 PANO1I0J062 215 aa8□□□□□ -1.13
GRAMD1B-208ENST00000532581 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
GRAMD1B-208ENST00000532581 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
GRAMD1B-208ENST00000532581 MGAM2Q2M2H8 2515 aa7.99□□□□□ -1.13
GRAMD1B-208ENST00000532581 SPACA4Q8TDM5 124 aa7.97□□□□□ -1.13
GRAMD1B-208ENST00000532581 A8MUN3 132 aa7.96□□□□□ -1.14
GRAMD1B-208ENST00000532581 DNAH7Q8WXX0 4024 aa7.96□□□□□ -1.14
GRAMD1B-208ENST00000532581 PLECQ15149 4684 aaKnown RBP7.96□□□□□ -1.14
GRAMD1B-208ENST00000532581 Q96NJ1 140 aa7.96□□□□□ -1.14
GRAMD1B-208ENST00000532581 LINC00483Q53H64 154 aa7.95□□□□□ -1.14
GRAMD1B-208ENST00000532581 MDFIQ99750 246 aa7.95□□□□□ -1.14
GRAMD1B-208ENST00000532581 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
GRAMD1B-208ENST00000532581 NUPR2A6NF83 97 aa7.94□□□□□ -1.14
GRAMD1B-208ENST00000532581 ASB16-AS1Q495Z4 193 aa7.94□□□□□ -1.14
GRAMD1B-208ENST00000532581 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
GRAMD1B-208ENST00000532581 MOBPQ13875 183 aa7.94□□□□□ -1.14
GRAMD1B-208ENST00000532581 TENM2Q9NT68 2774 aa7.93□□□□□ -1.14
GRAMD1B-208ENST00000532581 CSMD3Q7Z407 3707 aa7.93□□□□□ -1.14
GRAMD1B-208ENST00000532581 TP53AIP1Q9HCN2 124 aa7.92□□□□□ -1.14
GRAMD1B-208ENST00000532581 ZNF706Q9Y5V0 76 aaPredicted RBP7.92□□□□□ -1.14
GRAMD1B-208ENST00000532581 C8orf17Q9NRJ1 99 aa7.9□□□□□ -1.15
GRAMD1B-208ENST00000532581 VPS13DQ5THJ4 4388 aa7.9□□□□□ -1.15
GRAMD1B-208ENST00000532581 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
GRAMD1B-208ENST00000532581 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
GRAMD1B-208ENST00000532581 A0A087WTM6 91 aa7.87□□□□□ -1.15
GRAMD1B-208ENST00000532581 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
GRAMD1B-208ENST00000532581 Q5VV11 94 aa7.87□□□□□ -1.15
GRAMD1B-208ENST00000532581 Q6ZR54 194 aa7.87□□□□□ -1.15
GRAMD1B-208ENST00000532581 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
GRAMD1B-208ENST00000532581 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
GRAMD1B-208ENST00000532581 CD164Q04900 197 aa7.86□□□□□ -1.15
GRAMD1B-208ENST00000532581 IGLV5-52A0A0A0MRZ9 124 aa7.86□□□□□ -1.15
GRAMD1B-208ENST00000532581 PSORS1C2Q9UIG4 136 aa7.85□□□□□ -1.15
GRAMD1B-208ENST00000532581 COA5Q86WW8 74 aa7.84□□□□□ -1.15
GRAMD1B-208ENST00000532581 SPTSSBQ8NFR3 76 aa7.84□□□□□ -1.15
GRAMD1B-208ENST00000532581 IGHV6-1A0A0B4J1U7 121 aa7.84□□□□□ -1.15
GRAMD1B-208ENST00000532581 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
GRAMD1B-208ENST00000532581 RTL8CO15255 209 aa7.83□□□□□ -1.16
GRAMD1B-208ENST00000532581 DNAH8Q96JB1 4490 aa7.83□□□□□ -1.16
GRAMD1B-208ENST00000532581 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
GRAMD1B-208ENST00000532581 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
GRAMD1B-208ENST00000532581 ZNF861PO60384 105 aa7.82□□□□□ -1.16
GRAMD1B-208ENST00000532581 PCOTHQ58A44 107 aa7.82□□□□□ -1.16
GRAMD1B-208ENST00000532581 MRPL34Q9BQ48 92 aaKnown RBP7.82□□□□□ -1.16
GRAMD1B-208ENST00000532581 DNAH17Q9UFH2 4485 aa7.81□□□□□ -1.16
GRAMD1B-208ENST00000532581 NDUFS5O43920 106 aa7.81□□□□□ -1.16
GRAMD1B-208ENST00000532581 HECTD4Q9Y4D8 3996 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms