RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 KRTAP10-2P60368 255 aa5.03□□□□□ -1.6
CTNND1-230ENST00000532245 LOC110117498A0A087WWA1 95 aa5.03□□□□□ -1.6
CTNND1-230ENST00000532245 C1orf195Q5TG92 126 aa5.03□□□□□ -1.6
CTNND1-230ENST00000532245 LOC400499M0QZD8 3231 aa5.03□□□□□ -1.6
CTNND1-230ENST00000532245 A0A1B0GW54 56 aa5.02□□□□□ -1.61
CTNND1-230ENST00000532245 TENM4Q6N022 2769 aa5.02□□□□□ -1.61
CTNND1-230ENST00000532245 Q5VSD8 79 aa5.02□□□□□ -1.61
CTNND1-230ENST00000532245 COX7CP15954 63 aa5.02□□□□□ -1.61
CTNND1-230ENST00000532245 SMCPP49901 116 aaPredicted RBP5.02□□□□□ -1.61
CTNND1-230ENST00000532245 TRBV7-7A0A0K0K1E9 115 aa5.01□□□□□ -1.61
CTNND1-230ENST00000532245 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
CTNND1-230ENST00000532245 TP53AIP1Q9HCN2 124 aa5.01□□□□□ -1.61
CTNND1-230ENST00000532245 IGLV5-37A0A075B6J1 123 aa5□□□□□ -1.61
CTNND1-230ENST00000532245 PLAC8Q9NZF1 115 aa5□□□□□ -1.61
CTNND1-230ENST00000532245 A8MWP4 228 aa5□□□□□ -1.61
CTNND1-230ENST00000532245 C8orf87E5RJ46 101 aa5□□□□□ -1.61
CTNND1-230ENST00000532245 FAM104AQ969W3 186 aa4.99□□□□□ -1.61
CTNND1-230ENST00000532245 K7EQZ3 153 aa4.98□□□□□ -1.61
CTNND1-230ENST00000532245 CCDC179H3BU77 68 aa4.98□□□□□ -1.61
CTNND1-230ENST00000532245 PMAIP1Q13794 54 aa4.98□□□□□ -1.61
CTNND1-230ENST00000532245 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
CTNND1-230ENST00000532245 MRPL34Q9BQ48 92 aaKnown RBP4.97□□□□□ -1.61
CTNND1-230ENST00000532245 STAB2Q8WWQ8 2551 aa4.97□□□□□ -1.61
CTNND1-230ENST00000532245 IGLV7-46A0A075B6I9 117 aa4.97□□□□□ -1.61
CTNND1-230ENST00000532245 PRO0461Q9UI25 63 aa4.96□□□□□ -1.62
CTNND1-230ENST00000532245 KMT2BQ9UMN6 2715 aaPredicted RBP4.96□□□□□ -1.62
CTNND1-230ENST00000532245 Q6ZR54 194 aa4.95□□□□□ -1.62
CTNND1-230ENST00000532245 C8orf17Q9NRJ1 99 aa4.94□□□□□ -1.62
CTNND1-230ENST00000532245 TRAV22A0A0B4J277 110 aa4.94□□□□□ -1.62
CTNND1-230ENST00000532245 A0A1B0GVX0 72 aa4.94□□□□□ -1.62
CTNND1-230ENST00000532245 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
CTNND1-230ENST00000532245 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
CTNND1-230ENST00000532245 ZANQ9Y493 2812 aa4.94□□□□□ -1.62
CTNND1-230ENST00000532245 CELSR2Q9HCU4 2923 aa4.92□□□□□ -1.62
CTNND1-230ENST00000532245 PRR15Q8IV56 129 aa4.92□□□□□ -1.62
CTNND1-230ENST00000532245 KRTAP26-1Q6PEX3 210 aa4.92□□□□□ -1.62
CTNND1-230ENST00000532245 RELNP78509 3460 aa4.91□□□□□ -1.62
CTNND1-230ENST00000532245 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
CTNND1-230ENST00000532245 Q6ZSA8 131 aa4.9□□□□□ -1.63
CTNND1-230ENST00000532245 NIPBLQ6KC79 2804 aaeCLIP4.9□□□□□ -1.631e-6■□□□□ 9
CTNND1-230ENST00000532245 ACYP2P14621 99 aa4.9□□□□□ -1.63
CTNND1-230ENST00000532245 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.63
CTNND1-230ENST00000532245 Q8NDZ9 215 aa4.9□□□□□ -1.63
CTNND1-230ENST00000532245 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
CTNND1-230ENST00000532245 PANO1I0J062 215 aa4.89□□□□□ -1.63
CTNND1-230ENST00000532245 LAMA5O15230 3695 aa4.89□□□□□ -1.63
CTNND1-230ENST00000532245 LOC101927531A0A1B0GV80 90 aa4.88□□□□□ -1.63
CTNND1-230ENST00000532245 DMDP11532 3685 aa4.88□□□□□ -1.63
CTNND1-230ENST00000532245 HRNRQ86YZ3 2850 aaPredicted RBP4.87□□□□□ -1.63
CTNND1-230ENST00000532245 CD164Q04900 197 aa4.86□□□□□ -1.63
CTNND1-230ENST00000532245 PSPHP1O15172 72 aa4.86□□□□□ -1.63
CTNND1-230ENST00000532245 ASPMQ8IZT6 3477 aa4.86□□□□□ -1.63
CTNND1-230ENST00000532245 IGLV5-48A0A075B6I7 105 aa4.86□□□□□ -1.63
CTNND1-230ENST00000532245 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
CTNND1-230ENST00000532245 M0R2T5 61 aa4.86□□□□□ -1.63
CTNND1-230ENST00000532245 H3BPC8 53 aa4.85□□□□□ -1.63
CTNND1-230ENST00000532245 DCHS1Q96JQ0 3298 aa4.84□□□□□ -1.63
CTNND1-230ENST00000532245 DCHS2Q6V1P9 2916 aa4.84□□□□□ -1.63
CTNND1-230ENST00000532245 ASH1LQ9NR48 2969 aaKnown RBP4.84□□□□□ -1.63
CTNND1-230ENST00000532245 SPRR1AP35321 89 aa4.83□□□□□ -1.64
CTNND1-230ENST00000532245 A0A1B0GU69 56 aa4.82□□□□□ -1.64
CTNND1-230ENST00000532245 Q6ZRN7 208 aaPredicted RBP4.82□□□□□ -1.64
CTNND1-230ENST00000532245 IGLV8-61A0A075B6I0 122 aa4.82□□□□□ -1.64
CTNND1-230ENST00000532245 Q8N1X5 172 aa4.8□□□□□ -1.64
CTNND1-230ENST00000532245 WDFY3Q8IZQ1 3526 aa4.8□□□□□ -1.64
CTNND1-230ENST00000532245 NF1P21359 2839 aa4.79□□□□□ -1.64
CTNND1-230ENST00000532245 FBN2P35556 2912 aa4.78□□□□□ -1.64
CTNND1-230ENST00000532245 NBPF19A0A087WUL8 3843 aa4.77□□□□□ -1.65
CTNND1-230ENST00000532245 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
CTNND1-230ENST00000532245 SPRR1BP22528 89 aa4.75□□□□□ -1.65
CTNND1-230ENST00000532245 A0A087X002 238 aa4.74□□□□□ -1.65
CTNND1-230ENST00000532245 DMBT1Q9UGM3 2413 aaPredicted RBP4.74□□□□□ -1.65
CTNND1-230ENST00000532245 LINC01554Q52M75 96 aa4.74□□□□□ -1.65
CTNND1-230ENST00000532245 MXRA5Q9NR99 2828 aa4.73□□□□□ -1.65
CTNND1-230ENST00000532245 OXTP01178 125 aa4.73□□□□□ -1.65
CTNND1-230ENST00000532245 ZFHX4Q86UP3 3567 aa4.73□□□□□ -1.65
CTNND1-230ENST00000532245 COA5Q86WW8 74 aa4.72□□□□□ -1.65
CTNND1-230ENST00000532245 CRIPTQ9P021 101 aa4.72□□□□□ -1.65
CTNND1-230ENST00000532245 KRTAP11-1Q8IUC1 163 aa4.72□□□□□ -1.65
CTNND1-230ENST00000532245 C4orf26Q17RF5 130 aa4.72□□□□□ -1.65
CTNND1-230ENST00000532245 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
CTNND1-230ENST00000532245 LINC00483Q53H64 154 aa4.7□□□□□ -1.66
CTNND1-230ENST00000532245 SMG1Q96Q15 3661 aaKnown RBP4.7□□□□□ -1.66
CTNND1-230ENST00000532245 LINC01600Q96MT4 127 aa4.69□□□□□ -1.66
CTNND1-230ENST00000532245 PDZD2O15018 2839 aa4.69□□□□□ -1.66
CTNND1-230ENST00000532245 ZFHX3Q15911 3703 aa4.68□□□□□ -1.66
CTNND1-230ENST00000532245 FLG2Q5D862 2391 aaPredicted RBP4.68□□□□□ -1.66
CTNND1-230ENST00000532245 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
CTNND1-230ENST00000532245 FP248Q71RG6 208 aaPredicted RBP4.67□□□□□ -1.66
CTNND1-230ENST00000532245 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
CTNND1-230ENST00000532245 LINC00472Q9H8W2 130 aa4.66□□□□□ -1.66
CTNND1-230ENST00000532245 TENM2Q9NT68 2774 aa4.66□□□□□ -1.66
CTNND1-230ENST00000532245 SPINK7P58062 85 aa4.66□□□□□ -1.66
CTNND1-230ENST00000532245 LUZP6Q538Z0 58 aa4.65□□□□□ -1.66
CTNND1-230ENST00000532245 KRTAP7-1Q8IUC3 87 aa4.65□□□□□ -1.66
CTNND1-230ENST00000532245 OTOGQ6ZRI0 2925 aa4.65□□□□□ -1.67
CTNND1-230ENST00000532245 A0A0D9SG42 100 aa4.63□□□□□ -1.67
CTNND1-230ENST00000532245 HRES1P13985 223 aa4.63□□□□□ -1.67
CTNND1-230ENST00000532245 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
CTNND1-230ENST00000532245 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms