RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 HMGN3Q15651 99 aa-1.57□□□□□ -2.66
ATM-217ENST00000531957 MEIG1Q5JSS6 88 aa-1.57□□□□□ -2.66
ATM-217ENST00000531957 ANP32BQ92688 251 aaKnown RBP-1.57□□□□□ -2.66
ATM-217ENST00000531957 TRGV9Q99603 122 aa-1.57□□□□□ -2.66
ATM-217ENST00000531957 SMARCA2P51531 1590 aa-1.57□□□□□ -2.66
ATM-217ENST00000531957 ABCC2Q92887 1545 aa-1.57□□□□□ -2.66
ATM-217ENST00000531957 NWD1Q149M9 1564 aa-1.58□□□□□ -2.66
ATM-217ENST00000531957 CACFD1Q9UGQ2 172 aa-1.58□□□□□ -2.66
ATM-217ENST00000531957 LY75O60449 1722 aa-1.58□□□□□ -2.66
ATM-217ENST00000531957 PKD1L3Q7Z443 1732 aa-1.58□□□□□ -2.66
ATM-217ENST00000531957 ANKRD36BQ8N2N9 1353 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 PARP4Q9UKK3 1724 aaKnown RBP-1.59□□□□□ -2.66
ATM-217ENST00000531957 CRYM-AS1A6NIL9 109 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 H3BQ15 152 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 MPC2O95563 127 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 ARPC4P59998 168 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 PMCHL1Q16048 86 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 TSTD1Q8NFU3 115 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 PFDN5Q99471 154 aa-1.59□□□□□ -2.66
ATM-217ENST00000531957 RGPD1P0DJD0 1748 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 LRRC7Q96NW7 1537 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 TEX14Q8IWB6 1497 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 FAM24AA6NFZ4 105 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 M0QZ58 72 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 KRTDAPP60985 99 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 GAFA1Q96PS6 74 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.6□□□□□ -2.67
ATM-217ENST00000531957 CHD1O14646 1710 aa-1.6□□□□□ -2.67
ATM-217ENST00000531957 ITSN2Q9NZM3 1697 aa-1.61□□□□□ -2.67
ATM-217ENST00000531957 D6R8Y8 96 aa-1.61□□□□□ -2.67
ATM-217ENST00000531957 LEPROTL1O95214 131 aa-1.61□□□□□ -2.67
ATM-217ENST00000531957 SELENOWP63302 87 aa-1.61□□□□□ -2.67
ATM-217ENST00000531957 MUSTN1Q8IVN3 82 aa-1.61□□□□□ -2.67
ATM-217ENST00000531957 NOP10Q9NPE3 64 aaKnown RBP-1.61□□□□□ -2.67
ATM-217ENST00000531957 KTN1Q86UP2 1357 aaKnown RBP-1.61□□□□□ -2.67
ATM-217ENST00000531957 FOCADQ5VW36 1801 aa-1.61□□□□□ -2.67
ATM-217ENST00000531957 NRXN1Q9ULB1 1477 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 RAPGEF2Q9Y4G8 1499 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 POLR1AO95602 1720 aaPredicted RBP-1.62□□□□□ -2.67
ATM-217ENST00000531957 NAIPQ13075 1403 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 TMEM218A2RU14 115 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 NDUFC1O43677 76 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.62□□□□□ -2.67
ATM-217ENST00000531957 ARHGAP5Q13017 1502 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 EP400Q96L91 3159 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 CC2D2AQ9P2K1 1620 aa-1.62□□□□□ -2.67
ATM-217ENST00000531957 MLH3Q9UHC1 1453 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 SUPT6HQ7KZ85 1726 aaKnown RBP-1.63□□□□□ -2.67
ATM-217ENST00000531957 EIF4G3O43432 1585 aaKnown RBP-1.63□□□□□ -2.67
ATM-217ENST00000531957 MUC3AQ02505 3323 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 SPART-AS1P0CW21 52 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 DEFB136Q30KP8 78 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 BVES-AS1Q5T3Y7 98 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 LINC00470Q9BZP3 86 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 PAIP2BQ9ULR5 123 aaKnown RBP-1.63□□□□□ -2.67
ATM-217ENST00000531957 TMEM131LA2VDJ0 1609 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 DOT1LQ8TEK3 1739 aa-1.63□□□□□ -2.67
ATM-217ENST00000531957 WDFY4Q6ZS81 3184 aa-1.64□□□□□ -2.67
ATM-217ENST00000531957 A0A1B0GUT8 65 aa-1.64□□□□□ -2.67
ATM-217ENST00000531957 hADV29S1A0JD25 119 aa-1.64□□□□□ -2.67
ATM-217ENST00000531957 A8MTW9 85 aa-1.64□□□□□ -2.67
ATM-217ENST00000531957 IQCF6A8MYZ5 107 aa-1.64□□□□□ -2.67
ATM-217ENST00000531957 UQCRHP07919 91 aa-1.64□□□□□ -2.67
ATM-217ENST00000531957 RPS27P42677 84 aaKnown RBP-1.64□□□□□ -2.67
ATM-217ENST00000531957 RPS27LQ71UM5 84 aaKnown RBP-1.64□□□□□ -2.67
ATM-217ENST00000531957 KIF1AQ12756 1690 aa-1.64□□□□□ -2.67
ATM-217ENST00000531957 TRAV21A0A0B4J279 112 aa-1.65□□□□□ -2.67
ATM-217ENST00000531957 H3BUA1 57 aa-1.65□□□□□ -2.67
ATM-217ENST00000531957 ACYP1P07311 99 aa-1.65□□□□□ -2.67
ATM-217ENST00000531957 LZICQ8WZA0 190 aa-1.65□□□□□ -2.67
ATM-217ENST00000531957 IER3IP1Q9Y5U9 82 aa-1.65□□□□□ -2.67
ATM-217ENST00000531957 ZC3H13Q5T200 1668 aaKnown RBP-1.65□□□□□ -2.67
ATM-217ENST00000531957 SPHKAPQ2M3C7 1700 aa-1.66□□□□□ -2.67
ATM-217ENST00000531957 LTN1O94822 1766 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 DNMBPQ6XZF7 1577 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 THOC2Q8NI27 1593 aaKnown RBP-1.66□□□□□ -2.68
ATM-217ENST00000531957 DIP2BQ9P265 1576 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 ATP10BO94823 1461 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 PLIN4Q96Q06 1357 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 DEFB131BA0A096LNP1 70 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 M0QY20 66 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 MT-ATP8P03928 68 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 S100PP25815 95 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 ETDBQ3ZM63 59 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 MYH4Q9Y623 1939 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 KIAA0586Q9BVV6 1533 aa-1.66□□□□□ -2.68
ATM-217ENST00000531957 A0A1B0GUL6 1792 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 FAM25AB3EWG3 89 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 FAM25CB3EWG5 89 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 FAM25GB3EWG6 89 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 GNG7O60262 68 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 AKAIN1P0CW23 69 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 CCDC58Q4VC31 144 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 ITSN1Q15811 1721 aa-1.67□□□□□ -2.68
ATM-217ENST00000531957 MED14O60244 1454 aa-1.68□□□□□ -2.68
ATM-217ENST00000531957 MYOM2P54296 1465 aa-1.68□□□□□ -2.68
ATM-217ENST00000531957 DDX60LQ5H9U9 1706 aaKnown RBP-1.68□□□□□ -2.68
ATM-217ENST00000531957 PLGLAQ15195 96 aa-1.68□□□□□ -2.68
ATM-217ENST00000531957 ZNF720Q7Z2F6 126 aa-1.68□□□□□ -2.68
ATM-217ENST00000531957 PYDC1Q8WXC3 89 aa-1.68□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms