RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	SPANXD	Q9BXN6	97 aa		3.11	□□□□□ -1.91
PUM1-222	ENST00000531867	TMEM167B	Q9NRX6	74 aa		3.11	□□□□□ -1.91
PUM1-222	ENST00000531867	MRPL35	Q9NZE8	188 aa	Known RBP	3.11	□□□□□ -1.91
PUM1-222	ENST00000531867	MUC21	A0A140T8X8	626 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867		G3V3Q6	166 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867	NUPR1	O60356	82 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867	TRGC1	P0CF51	173 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867	SS18	Q15532	418 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867	MEIG1	Q5JSS6	88 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867		Q8N9L7	120 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867	CST9L	Q9H4G1	147 aa		3.1	□□□□□ -1.91
PUM1-222	ENST00000531867	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	FAM236A	A0A1B0GUQ0	79 aa		3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	FAM236B	A0A1B0GV22	79 aa		3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	GNG4	P50150	75 aa		3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	TMEM136	Q6ZRR5	245 aa		3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	COPS9	Q8WXC6	57 aa		3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	CDC42SE2	Q9NRR3	84 aa		3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	OBSCN	Q5VST9	7968 aa		3.09	□□□□□ -1.91
PUM1-222	ENST00000531867	FABP4	P15090	132 aa		3.08	□□□□□ -1.92
PUM1-222	ENST00000531867	KCNRG	Q8N5I3	272 aa		3.08	□□□□□ -1.92
PUM1-222	ENST00000531867	FLG	P20930	4061 aa	Predicted RBP	3.08	□□□□□ -1.92
PUM1-222	ENST00000531867	MGP	P08493	103 aa		3.07	□□□□□ -1.92
PUM1-222	ENST00000531867	LINC01545	Q5VT33	79 aa		3.07	□□□□□ -1.92
PUM1-222	ENST00000531867		Q6ZQT0	140 aa		3.07	□□□□□ -1.92
PUM1-222	ENST00000531867	PRO0461	Q9UI25	63 aa		3.07	□□□□□ -1.92
PUM1-222	ENST00000531867		R4GN34	69 aa		3.07	□□□□□ -1.92
PUM1-222	ENST00000531867	TRBV20-1	A0A075B6N2	111 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	SIX6	O95475	246 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	IL7	P13232	177 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	UBE2G1	P62253	170 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	SERF2	P84101	59 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	SPAG11B	Q08648	103 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	TEX261	Q6UWH6	196 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	KRTAP13-1	Q8IUC0	172 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	NAA38	Q9BRA0	125 aa	Known RBP	3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	C14orf132	Q9NPU4	83 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	C6orf48	Q9UBA6	75 aa		3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	SYNE2	Q8WXH0	6885 aa	Known RBP	3.06	□□□□□ -1.92
PUM1-222	ENST00000531867	TMEM218	A2RU14	115 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	NDUFA1	O15239	70 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	BCE1	O60756	84 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	MPC2	O95563	127 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	TRAC	P01848	142 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	BAALC-AS2	P0C853	105 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	CLLU1	Q5K131	121 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	SPAG11A	Q6PDA7	123 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	GTF2H5	Q6ZYL4	71 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	PPP1R1C	Q8WVI7	109 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	RAB37	Q96AX2	223 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867	CYTL1	Q9NRR1	136 aa		3.05	□□□□□ -1.92
PUM1-222	ENST00000531867		A0A1B0GVG6	124 aa		3.04	□□□□□ -1.92
PUM1-222	ENST00000531867	COLCA2	A8K830	154 aa		3.04	□□□□□ -1.92
PUM1-222	ENST00000531867	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.04	□□□□□ -1.92
PUM1-222	ENST00000531867	LINC00299	Q6ZSB3	139 aa		3.04	□□□□□ -1.92
PUM1-222	ENST00000531867	C5orf38	Q86SI9	138 aa		3.04	□□□□□ -1.92
PUM1-222	ENST00000531867	KRTAP4-3	Q9BYR4	195 aa		3.04	□□□□□ -1.92
PUM1-222	ENST00000531867	C22orf24	Q9Y442	160 aa		3.04	□□□□□ -1.92
PUM1-222	ENST00000531867	IGKV2D-26	A0A0A0MRZ7	120 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	TRBV6-5	A0A0K0K1A5	114 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	CTXND1	A0A1B0GTU2	59 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	SDHAF1	A6NFY7	115 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	HMSD	A8MTL9	139 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867		F2Z2F3	143 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867		I3L3M4	83 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867		M0R143	59 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867		M0R2T5	61 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	CKS2	P33552	79 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	TMEM258	P61165	79 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	ZNF345	Q14585	488 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	S100Z	Q8WXG8	99 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	RPL39L	Q96EH5	51 aa	Known RBP	3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	CNFN	Q9BYD5	112 aa		3.03	□□□□□ -1.92
PUM1-222	ENST00000531867	MACF1	Q9UPN3	7388 aa	Known RBP	3.02	□□□□□ -1.93
PUM1-222	ENST00000531867	TRBV30	A0A0K0K1B3	111 aa		3.02	□□□□□ -1.93
PUM1-222	ENST00000531867	hDV103S1	A0JD37	113 aa		3.02	□□□□□ -1.93
PUM1-222	ENST00000531867	HINT1	P49773	126 aa	Predicted RBP	3.02	□□□□□ -1.93
PUM1-222	ENST00000531867	BAGE2	Q86Y30	109 aa		3.02	□□□□□ -1.93
PUM1-222	ENST00000531867	LINC00167	Q96N53	147 aa		3.02	□□□□□ -1.93
PUM1-222	ENST00000531867	POLR2K	P53803	58 aa	Known RBP	3.01	□□□□□ -1.93
PUM1-222	ENST00000531867	KRTAP6-3	Q3LI67	103 aa		3.01	□□□□□ -1.93
PUM1-222	ENST00000531867	C9orf62	Q8N4C0	152 aa		3.01	□□□□□ -1.93
PUM1-222	ENST00000531867	CLEC2B	Q92478	149 aa		3.01	□□□□□ -1.93
PUM1-222	ENST00000531867	UBE2D4	Q9Y2X8	147 aa		3.01	□□□□□ -1.93
PUM1-222	ENST00000531867	C7orf77	A4D0Y5	90 aa		3	□□□□□ -1.93
PUM1-222	ENST00000531867	IGKV2-28	A0A075B6P5	120 aa		2.99	□□□□□ -1.93
PUM1-222	ENST00000531867	IGKV2D-28	P01615	120 aa		2.99	□□□□□ -1.93
PUM1-222	ENST00000531867	ROMO1	P60602	79 aa		2.99	□□□□□ -1.93
PUM1-222	ENST00000531867	PCOTH	Q58A44	107 aa		2.99	□□□□□ -1.93
PUM1-222	ENST00000531867		Q9BRP9	147 aa		2.99	□□□□□ -1.93
PUM1-222	ENST00000531867	TIMM21	Q9BVV7	248 aa		2.99	□□□□□ -1.93
PUM1-222	ENST00000531867	TMEM242	Q9NWH2	141 aa		2.99	□□□□□ -1.93
PUM1-222	ENST00000531867	CCDC179	H3BU77	68 aa		2.98	□□□□□ -1.93
PUM1-222	ENST00000531867	SPINK1	P00995	79 aa		2.98	□□□□□ -1.93
PUM1-222	ENST00000531867	HRES1	P13985	223 aa		2.98	□□□□□ -1.93
PUM1-222	ENST00000531867	RPS29	P62273	56 aa	Known RBP	2.98	□□□□□ -1.93
PUM1-222	ENST00000531867	HSD52	Q0P140	79 aa		2.98	□□□□□ -1.93
PUM1-222	ENST00000531867	C2orf82	Q6UX34	121 aa		2.98	□□□□□ -1.93
PUM1-222	ENST00000531867	ATP11AUN	Q6ZP68	121 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms