RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 SMIM11BQ8TCY0 68 aa4.74□□□□□ -1.65
USF1-210ENST00000531842 TRBV7-6A0A0J9YX20 115 aa4.73□□□□□ -1.65
USF1-210ENST00000531842 A4D1N5 150 aa4.73□□□□□ -1.65
USF1-210ENST00000531842 CD164Q04900 197 aa4.73□□□□□ -1.65
USF1-210ENST00000531842 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
USF1-210ENST00000531842 A6NDN8 102 aa4.72□□□□□ -1.65
USF1-210ENST00000531842 SCGB1D1O95968 90 aa4.72□□□□□ -1.65
USF1-210ENST00000531842 Q6Q795 121 aa4.72□□□□□ -1.65
USF1-210ENST00000531842 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
USF1-210ENST00000531842 IGLV5-48A0A075B6I7 105 aa4.71□□□□□ -1.66
USF1-210ENST00000531842 COX8AP10176 69 aa4.71□□□□□ -1.66
USF1-210ENST00000531842 C2orf91Q6ZV80 131 aa4.71□□□□□ -1.66
USF1-210ENST00000531842 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
USF1-210ENST00000531842 COPS9Q8WXC6 57 aa4.71□□□□□ -1.66
USF1-210ENST00000531842 A0A1B0GWB2 263 aa4.7□□□□□ -1.66
USF1-210ENST00000531842 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
USF1-210ENST00000531842 C1orf195Q5TG92 126 aa4.7□□□□□ -1.66
USF1-210ENST00000531842 C14orf144Q96I85 54 aa4.7□□□□□ -1.66
USF1-210ENST00000531842 C12orf57Q99622 126 aa4.7□□□□□ -1.66
USF1-210ENST00000531842 TRAV13-2A0A0B4J235 113 aa4.69□□□□□ -1.66
USF1-210ENST00000531842 HSBP1L1C9JCN9 74 aa4.69□□□□□ -1.66
USF1-210ENST00000531842 DLEU1O43261 78 aa4.69□□□□□ -1.66
USF1-210ENST00000531842 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
USF1-210ENST00000531842 TCL1BO95988 128 aa4.68□□□□□ -1.66
USF1-210ENST00000531842 C21orf62-AS1Q17RA5 79 aa4.68□□□□□ -1.66
USF1-210ENST00000531842 Q5XG85 94 aa4.68□□□□□ -1.66
USF1-210ENST00000531842 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
USF1-210ENST00000531842 PAM16Q9Y3D7 125 aa4.68□□□□□ -1.66
USF1-210ENST00000531842 F8WEM9 126 aa4.67□□□□□ -1.66
USF1-210ENST00000531842 LCE2BO14633 110 aa4.67□□□□□ -1.66
USF1-210ENST00000531842 SPATA45Q537H7 98 aa4.67□□□□□ -1.66
USF1-210ENST00000531842 NHP2Q9NX24 153 aaKnown RBP4.67□□□□□ -1.66
USF1-210ENST00000531842 CFC1P0CG37 223 aa4.66□□□□□ -1.66
USF1-210ENST00000531842 PYY3Q5JQD4 70 aa4.66□□□□□ -1.66
USF1-210ENST00000531842 HIST1H4GQ99525 98 aa4.66□□□□□ -1.66
USF1-210ENST00000531842 HIGD1BQ9P298 99 aa4.66□□□□□ -1.66
USF1-210ENST00000531842 VAMP3Q15836 100 aa4.65□□□□□ -1.67
USF1-210ENST00000531842 FAM218AQ96MZ4 157 aa4.64□□□□□ -1.67
USF1-210ENST00000531842 MT2AP02795 61 aa4.63□□□□□ -1.67
USF1-210ENST00000531842 Q6ZQY7 126 aa4.63□□□□□ -1.67
USF1-210ENST00000531842 VAMP8Q9BV40 100 aa4.63□□□□□ -1.67
USF1-210ENST00000531842 hADV29S1A0JD25 119 aa4.62□□□□□ -1.67
USF1-210ENST00000531842 FXYD2P54710 66 aa4.62□□□□□ -1.67
USF1-210ENST00000531842 ATP11AUNQ6ZP68 121 aa4.62□□□□□ -1.67
USF1-210ENST00000531842 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
USF1-210ENST00000531842 A0A0B4J2C4 111 aa4.61□□□□□ -1.67
USF1-210ENST00000531842 MT1FP04733 61 aa4.61□□□□□ -1.67
USF1-210ENST00000531842 CEND1Q8N111 149 aa4.61□□□□□ -1.67
USF1-210ENST00000531842 Q6JHZ5 121 aa4.6□□□□□ -1.67
USF1-210ENST00000531842 OBSCN-AS1Q96MR7 158 aa4.6□□□□□ -1.67
USF1-210ENST00000531842 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.67
USF1-210ENST00000531842 IGFL1Q6UW32 110 aa4.59□□□□□ -1.67
USF1-210ENST00000531842 CLEC2BQ92478 149 aa4.59□□□□□ -1.67
USF1-210ENST00000531842 OCIAD2Q56VL3 154 aa4.58□□□□□ -1.68
USF1-210ENST00000531842 BVES-AS1Q5T3Y7 98 aa4.58□□□□□ -1.68
USF1-210ENST00000531842 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.58□□□□□ -1.68
USF1-210ENST00000531842 H3BUT2 72 aa4.57□□□□□ -1.68
USF1-210ENST00000531842 SNHG12Q9BXW3 62 aa4.57□□□□□ -1.68
USF1-210ENST00000531842 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
USF1-210ENST00000531842 K7ERJ3 54 aa4.56□□□□□ -1.68
USF1-210ENST00000531842 LST1O00453 97 aa4.56□□□□□ -1.68
USF1-210ENST00000531842 TRIAP1O43715 76 aa4.56□□□□□ -1.68
USF1-210ENST00000531842 Q75L30 129 aa4.56□□□□□ -1.68
USF1-210ENST00000531842 RAB37Q96AX2 223 aa4.56□□□□□ -1.68
USF1-210ENST00000531842 Q96NJ1 140 aa4.56□□□□□ -1.68
USF1-210ENST00000531842 PRO1854Q9UHT4 67 aa4.56□□□□□ -1.68
USF1-210ENST00000531842 H0YGX0 51 aa4.54□□□□□ -1.68
USF1-210ENST00000531842 PPDPFLQ8WWR9 84 aa4.54□□□□□ -1.68
USF1-210ENST00000531842 HSD52Q0P140 79 aa4.53□□□□□ -1.68
USF1-210ENST00000531842 TRBV20-1A0A075B6N2 111 aa4.52□□□□□ -1.69
USF1-210ENST00000531842 SNCGO76070 127 aa4.52□□□□□ -1.69
USF1-210ENST00000531842 NDUFV3P56181 108 aaKnown RBP4.52□□□□□ -1.69
USF1-210ENST00000531842 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
USF1-210ENST00000531842 UQCR10Q9UDW1 63 aa4.51□□□□□ -1.69
USF1-210ENST00000531842 SS18L2Q9UHA2 77 aa4.51□□□□□ -1.69
USF1-210ENST00000531842 A0A1B0GX51 115 aa4.5□□□□□ -1.69
USF1-210ENST00000531842 A0A1W2PNM2 257 aa4.5□□□□□ -1.69
USF1-210ENST00000531842 H3BMG7 143 aa4.48□□□□□ -1.69
USF1-210ENST00000531842 C20orf166-AS1Q96NR2 134 aa4.48□□□□□ -1.69
USF1-210ENST00000531842 A0A087WSZ3 146 aa4.47□□□□□ -1.69
USF1-210ENST00000531842 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
USF1-210ENST00000531842 TEN1Q86WV5 123 aa4.47□□□□□ -1.69
USF1-210ENST00000531842 FAM236DA0A1B0GTK5 79 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 A8MUU9 505 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 FAM236CP0DP71 79 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 FABP2P12104 132 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 DSCR10P59022 87 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 SIGMAR1Q99720 223 aa4.46□□□□□ -1.7
USF1-210ENST00000531842 A0A1B0GV72 72 aa4.45□□□□□ -1.7
USF1-210ENST00000531842 GHRHP01286 108 aa4.44□□□□□ -1.7
USF1-210ENST00000531842 PSMB2P49721 201 aa4.44□□□□□ -1.7
USF1-210ENST00000531842 NAA38Q9BRA0 125 aaKnown RBP4.43□□□□□ -1.7
USF1-210ENST00000531842 ORMDL1Q9P0S3 153 aa4.43□□□□□ -1.7
USF1-210ENST00000531842 LOC105371267A0A1B0GV96 52 aa4.42□□□□□ -1.7
USF1-210ENST00000531842 TRACP01848 142 aa4.42□□□□□ -1.7
USF1-210ENST00000531842 LINC00313P59037 77 aa4.42□□□□□ -1.7
USF1-210ENST00000531842 TRBV7-4A0A0J9YYF1 115 aa4.41□□□□□ -1.7
USF1-210ENST00000531842 TMEM256-PLSCR3K7ERE1 68 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms