RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
GMDS-208ENST00000530927 ELOF1P60002 83 aaKnown RBP10.86□□□□□ -0.67
GMDS-208ENST00000530927 ATXN8Q156A1 80 aa10.86□□□□□ -0.67
GMDS-208ENST00000530927 PRR4Q16378 134 aa10.85□□□□□ -0.67
GMDS-208ENST00000530927 ETDBQ3ZM63 59 aa10.84□□□□□ -0.67
GMDS-208ENST00000530927 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
GMDS-208ENST00000530927 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
GMDS-208ENST00000530927 TEN1Q86WV5 123 aa10.84□□□□□ -0.67
GMDS-208ENST00000530927 SMCPP49901 116 aaPredicted RBP10.83□□□□□ -0.68
GMDS-208ENST00000530927 RETNLBQ9BQ08 111 aa10.83□□□□□ -0.68
GMDS-208ENST00000530927 DHRS4-AS1Q9P1J3 65 aa10.82□□□□□ -0.68
GMDS-208ENST00000530927 H0YGX0 51 aa10.81□□□□□ -0.68
GMDS-208ENST00000530927 PPDPFLQ8WWR9 84 aa10.81□□□□□ -0.68
GMDS-208ENST00000530927 IGLV9-49A0A0B4J1Y8 123 aa10.8□□□□□ -0.68
GMDS-208ENST00000530927 TRIAP1O43715 76 aa10.8□□□□□ -0.68
GMDS-208ENST00000530927 SLC25A20O43772 301 aa10.79□□□□□ -0.68
GMDS-208ENST00000530927 Q8NBF4 154 aa10.79□□□□□ -0.68
GMDS-208ENST00000530927 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
GMDS-208ENST00000530927 MOBPQ13875 183 aa10.77□□□□□ -0.68
GMDS-208ENST00000530927 LINC00575Q6W349 94 aa10.77□□□□□ -0.68
GMDS-208ENST00000530927 H3BT86 120 aa10.76□□□□□ -0.69
GMDS-208ENST00000530927 LST1O00453 97 aa10.75□□□□□ -0.69
GMDS-208ENST00000530927 ANKRD29Q8N6D5 301 aa10.75□□□□□ -0.69
GMDS-208ENST00000530927 C9JAW5 83 aa10.75□□□□□ -0.69
GMDS-208ENST00000530927 SNCGO76070 127 aa10.75□□□□□ -0.69
GMDS-208ENST00000530927 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
GMDS-208ENST00000530927 PCP4P48539 62 aa10.74□□□□□ -0.69
GMDS-208ENST00000530927 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
GMDS-208ENST00000530927 A0A1B0GX51 115 aa10.71□□□□□ -0.69
GMDS-208ENST00000530927 SCGB1A1P11684 91 aa10.71□□□□□ -0.69
GMDS-208ENST00000530927 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
GMDS-208ENST00000530927 CLEC2BQ92478 149 aa10.7□□□□□ -0.7
GMDS-208ENST00000530927 SIGMAR1Q99720 223 aa10.7□□□□□ -0.7
GMDS-208ENST00000530927 TRACP01848 142 aa10.69□□□□□ -0.7
GMDS-208ENST00000530927 C9orf153Q5TBE3 101 aa10.69□□□□□ -0.7
GMDS-208ENST00000530927 RNF213Q63HN8 5207 aa10.69□□□□□ -0.7
GMDS-208ENST00000530927 SPAG11AQ6PDA7 123 aa10.68□□□□□ -0.7
GMDS-208ENST00000530927 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
GMDS-208ENST00000530927 C4orf48Q5BLP8 95 aa10.67□□□□□ -0.7
GMDS-208ENST00000530927 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.67□□□□□ -0.7
GMDS-208ENST00000530927 SPRR1BP22528 89 aa10.66□□□□□ -0.7
GMDS-208ENST00000530927 Q6ZQY7 126 aa10.66□□□□□ -0.7
GMDS-208ENST00000530927 SSBP3-AS1Q7Z2R9 100 aa10.65□□□□□ -0.7
GMDS-208ENST00000530927 IGLV5-48A0A075B6I7 105 aa10.64□□□□□ -0.71
GMDS-208ENST00000530927 TEX49A0A1B0GTD5 131 aa10.63□□□□□ -0.71
GMDS-208ENST00000530927 DNAL4O96015 105 aa10.63□□□□□ -0.71
GMDS-208ENST00000530927 LINC01547P58512 204 aaPredicted RBP10.63□□□□□ -0.71
GMDS-208ENST00000530927 IGLV7-46A0A075B6I9 117 aa10.62□□□□□ -0.71
GMDS-208ENST00000530927 SPINK1P00995 79 aa10.62□□□□□ -0.71
GMDS-208ENST00000530927 GHRHP01286 108 aa10.61□□□□□ -0.71
GMDS-208ENST00000530927 FAM240AA0A1B0GVK7 77 aa10.6□□□□□ -0.71
GMDS-208ENST00000530927 CDIP1Q9H305 208 aa10.6□□□□□ -0.71
GMDS-208ENST00000530927 SMIM29Q86T20 159 aa10.59□□□□□ -0.71
GMDS-208ENST00000530927 Q8N377 158 aa10.59□□□□□ -0.71
GMDS-208ENST00000530927 HRCT1Q6UXD1 115 aa10.58□□□□□ -0.72
GMDS-208ENST00000530927 LAMTOR3Q9UHA4 124 aa10.58□□□□□ -0.72
GMDS-208ENST00000530927 A0A0G2JQZ4 141 aa10.57□□□□□ -0.72
GMDS-208ENST00000530927 H3BQ85 93 aa10.57□□□□□ -0.72
GMDS-208ENST00000530927 ORMDL1Q9P0S3 153 aa10.57□□□□□ -0.72
GMDS-208ENST00000530927 ACYP1P07311 99 aa10.55□□□□□ -0.72
GMDS-208ENST00000530927 TPRXLQ17RH7 258 aa10.54□□□□□ -0.72
GMDS-208ENST00000530927 TMEM256-PLSCR3K7ERE1 68 aa10.52□□□□□ -0.73
GMDS-208ENST00000530927 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.73
GMDS-208ENST00000530927 BAALC-AS2P0C853 105 aa10.51□□□□□ -0.73
GMDS-208ENST00000530927 FP248Q71RG6 208 aaPredicted RBP10.5□□□□□ -0.73
GMDS-208ENST00000530927 MUC17Q685J3 4493 aa10.49□□□□□ -0.73
GMDS-208ENST00000530927 MUC2Q02817 5179 aa10.49□□□□□ -0.73
GMDS-208ENST00000530927 F8WEM9 126 aa10.49□□□□□ -0.73
GMDS-208ENST00000530927 NDUFV3P56181 108 aaKnown RBP10.48□□□□□ -0.73
GMDS-208ENST00000530927 KRTAP13-3Q3SY46 172 aa10.48□□□□□ -0.73
GMDS-208ENST00000530927 C21orf62-AS1Q17RA5 79 aa10.47□□□□□ -0.73
GMDS-208ENST00000530927 Q6Q795 121 aa10.46□□□□□ -0.74
GMDS-208ENST00000530927 MT-ATP8P03928 68 aa10.44□□□□□ -0.74
GMDS-208ENST00000530927 IGLV8-61A0A075B6I0 122 aa10.42□□□□□ -0.74
GMDS-208ENST00000530927 OBSCN-AS1Q96MR7 158 aa10.42□□□□□ -0.74
GMDS-208ENST00000530927 Q6JHZ5 121 aa10.41□□□□□ -0.74
GMDS-208ENST00000530927 LIMD2Q9BT23 127 aa10.4□□□□□ -0.75
GMDS-208ENST00000530927 CD164Q04900 197 aa10.39□□□□□ -0.75
GMDS-208ENST00000530927 IMUPQ9GZP8 106 aa10.38□□□□□ -0.75
GMDS-208ENST00000530927 A0A1B0GV72 72 aa10.37□□□□□ -0.75
GMDS-208ENST00000530927 JMJD7-PLA2G4BH0Y9G9 81 aa10.37□□□□□ -0.75
GMDS-208ENST00000530927 IGFL1Q6UW32 110 aa10.35□□□□□ -0.75
GMDS-208ENST00000530927 LINC00643Q86TS7 51 aa10.35□□□□□ -0.75
GMDS-208ENST00000530927 TRBV7-7A0A0K0K1E9 115 aa10.34□□□□□ -0.75
GMDS-208ENST00000530927 RBM3P98179 157 aaKnown RBP10.34□□□□□ -0.75
GMDS-208ENST00000530927 C1orf195Q5TG92 126 aa10.32□□□□□ -0.76
GMDS-208ENST00000530927 DSCR8Q96T75 97 aa10.32□□□□□ -0.76
GMDS-208ENST00000530927 C9orf92A6NGG3 77 aa10.3□□□□□ -0.76
GMDS-208ENST00000530927 XP32Q5T750 250 aa10.3□□□□□ -0.76
GMDS-208ENST00000530927 Q5XG85 94 aa10.3□□□□□ -0.76
GMDS-208ENST00000530927 TRBV7-4A0A0J9YYF1 115 aa10.28□□□□□ -0.76
GMDS-208ENST00000530927 CCKP06307 115 aa10.25□□□□□ -0.77
GMDS-208ENST00000530927 PDE6GP18545 87 aa10.25□□□□□ -0.77
GMDS-208ENST00000530927 ASB16-AS1Q495Z4 193 aa10.24□□□□□ -0.77
GMDS-208ENST00000530927 KRTAP4-1Q9BYQ7 146 aa10.24□□□□□ -0.77
GMDS-208ENST00000530927 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
GMDS-208ENST00000530927 LOC110117498A0A087WWA1 95 aa10.24□□□□□ -0.77
GMDS-208ENST00000530927 A0A1W2PNM2 257 aa10.23□□□□□ -0.77
GMDS-208ENST00000530927 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
GMDS-208ENST00000530927 Q6ZQT0 140 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms