RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 A0A0C4DFX4 3053 aa5.03□□□□□ -1.6
CTNND1-227ENST00000530748 ACANP16112 2415 aa5.03□□□□□ -1.6
CTNND1-227ENST00000530748 H1FX-AS1Q4G0G2 97 aa5.01□□□□□ -1.61
CTNND1-227ENST00000530748 Q6ZR54 194 aa5.01□□□□□ -1.61
CTNND1-227ENST00000530748 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
CTNND1-227ENST00000530748 ROMO1P60602 79 aa4.99□□□□□ -1.61
CTNND1-227ENST00000530748 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
CTNND1-227ENST00000530748 UTRNP46939 3433 aa4.97□□□□□ -1.61
CTNND1-227ENST00000530748 RPL37P61927 97 aaKnown RBP4.97□□□□□ -1.61
CTNND1-227ENST00000530748 PANO1I0J062 215 aa4.96□□□□□ -1.61
CTNND1-227ENST00000530748 M0QZ58 72 aa4.96□□□□□ -1.62
CTNND1-227ENST00000530748 ADM2Q7Z4H4 148 aa4.95□□□□□ -1.62
CTNND1-227ENST00000530748 CEP350Q5VT06 3117 aa4.94□□□□□ -1.62
CTNND1-227ENST00000530748 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
CTNND1-227ENST00000530748 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
CTNND1-227ENST00000530748 PCNTO95613 3336 aa4.93□□□□□ -1.62
CTNND1-227ENST00000530748 KRTAP16-1A8MUX0 517 aa4.93□□□□□ -1.62
CTNND1-227ENST00000530748 PRRC2CQ9Y520 2896 aaKnown RBP4.92□□□□□ -1.62
CTNND1-227ENST00000530748 ASB16-AS1Q495Z4 193 aa4.92□□□□□ -1.62
CTNND1-227ENST00000530748 A0A087X002 238 aa4.91□□□□□ -1.62
CTNND1-227ENST00000530748 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
CTNND1-227ENST00000530748 Q6ZRN7 208 aaPredicted RBP4.87□□□□□ -1.63
CTNND1-227ENST00000530748 C5orf42Q9H799 3197 aa4.86□□□□□ -1.63
CTNND1-227ENST00000530748 KRTAP11-1Q8IUC1 163 aa4.85□□□□□ -1.63
CTNND1-227ENST00000530748 EPG5Q9HCE0 2579 aa4.85□□□□□ -1.63
CTNND1-227ENST00000530748 NOTCH2NLQ7Z3S9 236 aa4.84□□□□□ -1.63
CTNND1-227ENST00000530748 MGAM2Q2M2H8 2515 aa4.84□□□□□ -1.64
CTNND1-227ENST00000530748 FLNBO75369 2602 aaKnown RBP4.83□□□□□ -1.64
CTNND1-227ENST00000530748 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
CTNND1-227ENST00000530748 HECTD1Q9ULT8 2610 aa4.82□□□□□ -1.64
CTNND1-227ENST00000530748 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
CTNND1-227ENST00000530748 CHD7Q9P2D1 2997 aa4.8□□□□□ -1.64
CTNND1-227ENST00000530748 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
CTNND1-227ENST00000530748 USP24Q9UPU5 2620 aa4.79□□□□□ -1.64
CTNND1-227ENST00000530748 KRTAP13-2Q52LG2 175 aa4.79□□□□□ -1.64
CTNND1-227ENST00000530748 A8MUU9 505 aa4.77□□□□□ -1.65
CTNND1-227ENST00000530748 FLNAP21333 2647 aaKnown RBP4.74□□□□□ -1.65
CTNND1-227ENST00000530748 A6NN06 94 aa4.74□□□□□ -1.65
CTNND1-227ENST00000530748 KRTAP21-3Q3LHN1 58 aa4.73□□□□□ -1.65
CTNND1-227ENST00000530748 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
CTNND1-227ENST00000530748 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
CTNND1-227ENST00000530748 A8MU10 97 aa4.72□□□□□ -1.65
CTNND1-227ENST00000530748 ITPR3Q14573 2671 aa4.7□□□□□ -1.66
CTNND1-227ENST00000530748 CHD9Q3L8U1 2897 aa4.69□□□□□ -1.66
CTNND1-227ENST00000530748 HTTP42858 3142 aa4.68□□□□□ -1.66
CTNND1-227ENST00000530748 STAB1Q9NY15 2570 aa4.67□□□□□ -1.66
CTNND1-227ENST00000530748 ATRQ13535 2644 aa4.67□□□□□ -1.66
CTNND1-227ENST00000530748 CFAP54Q96N23 3096 aa4.67□□□□□ -1.66
CTNND1-227ENST00000530748 MAST4O15021 2626 aa4.66□□□□□ -1.66
CTNND1-227ENST00000530748 MKI67P46013 3256 aaKnown RBP4.65□□□□□ -1.66
CTNND1-227ENST00000530748 RANBP2P49792 3224 aaKnown RBP4.64□□□□□ -1.67
CTNND1-227ENST00000530748 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
CTNND1-227ENST00000530748 LAMA2P24043 3122 aaKnown RBP4.62□□□□□ -1.67
CTNND1-227ENST00000530748 LAMA3Q16787 3333 aa4.61□□□□□ -1.67
CTNND1-227ENST00000530748 HELZ2Q9BYK8 2649 aaKnown RBP4.61□□□□□ -1.67
CTNND1-227ENST00000530748 TNP1P09430 55 aa4.6□□□□□ -1.67
CTNND1-227ENST00000530748 CFAP46Q8IYW2 2715 aa4.6□□□□□ -1.67
CTNND1-227ENST00000530748 MGAQ8IWI9 3026 aa4.6□□□□□ -1.67
CTNND1-227ENST00000530748 BRCA2P51587 3418 aa4.59□□□□□ -1.67
CTNND1-227ENST00000530748 CENPEQ02224 2701 aa4.58□□□□□ -1.68
CTNND1-227ENST00000530748 TRANK1O15050 2925 aa4.57□□□□□ -1.68
CTNND1-227ENST00000530748 CHD6Q8TD26 2715 aa4.55□□□□□ -1.68
CTNND1-227ENST00000530748 XP32Q5T750 250 aa4.55□□□□□ -1.68
CTNND1-227ENST00000530748 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
CTNND1-227ENST00000530748 AKAP13Q12802 2813 aa4.54□□□□□ -1.68
CTNND1-227ENST00000530748 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
CTNND1-227ENST00000530748 WDFY4Q6ZS81 3184 aa4.53□□□□□ -1.68
CTNND1-227ENST00000530748 TRIOO75962 3097 aa4.52□□□□□ -1.69
CTNND1-227ENST00000530748 UNC80Q8N2C7 3258 aa4.52□□□□□ -1.69
CTNND1-227ENST00000530748 KRTAP10-8P60410 259 aa4.51□□□□□ -1.69
CTNND1-227ENST00000530748 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
CTNND1-227ENST00000530748 NBEAQ8NFP9 2946 aa4.5□□□□□ -1.69
CTNND1-227ENST00000530748 DNAH14Q0VDD8 3507 aa4.5□□□□□ -1.69
CTNND1-227ENST00000530748 PRUNE2Q8WUY3 3088 aa4.49□□□□□ -1.69
CTNND1-227ENST00000530748 XIRP2A4UGR9 3374 aa4.49□□□□□ -1.69
CTNND1-227ENST00000530748 P0C880 135 aa4.49□□□□□ -1.69
CTNND1-227ENST00000530748 TEX15Q9BXT5 2789 aa4.49□□□□□ -1.69
CTNND1-227ENST00000530748 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
CTNND1-227ENST00000530748 GCN1Q92616 2671 aaKnown RBP4.49□□□□□ -1.69
CTNND1-227ENST00000530748 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
CTNND1-227ENST00000530748 SETXQ7Z333 2677 aaKnown RBP4.47□□□□□ -1.69
CTNND1-227ENST00000530748 DMBT1Q9UGM3 2413 aaPredicted RBP4.46□□□□□ -1.69
CTNND1-227ENST00000530748 ZNF292O60281 2723 aa4.46□□□□□ -1.69
CTNND1-227ENST00000530748 A0A1B0GVY2 172 aa4.46□□□□□ -1.69
CTNND1-227ENST00000530748 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
CTNND1-227ENST00000530748 NBEAL1Q6ZS30 2694 aa4.45□□□□□ -1.7
CTNND1-227ENST00000530748 FRYQ5TBA9 3013 aa4.45□□□□□ -1.7
CTNND1-227ENST00000530748 UNC79Q9P2D8 2635 aa4.45□□□□□ -1.7
CTNND1-227ENST00000530748 CDH23Q9H251 3354 aa4.45□□□□□ -1.7
CTNND1-227ENST00000530748 TEP1Q99973 2627 aaKnown RBP4.45□□□□□ -1.7
CTNND1-227ENST00000530748 DSPP15924 2871 aaKnown RBP4.44□□□□□ -1.7
CTNND1-227ENST00000530748 NBEAL2Q6ZNJ1 2754 aa4.44□□□□□ -1.7
CTNND1-227ENST00000530748 VPS13AQ96RL7 3174 aa4.43□□□□□ -1.7
CTNND1-227ENST00000530748 CELSR3Q9NYQ7 3312 aa4.42□□□□□ -1.7
CTNND1-227ENST00000530748 H0YAA0 97 aa4.42□□□□□ -1.7
CTNND1-227ENST00000530748 FREM2Q5SZK8 3169 aa4.41□□□□□ -1.7
CTNND1-227ENST00000530748 MAP1AP78559 2803 aaPredicted RBP4.39□□□□□ -1.71
CTNND1-227ENST00000530748 COL6A5A8TX70 2615 aa4.39□□□□□ -1.71
CTNND1-227ENST00000530748 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
CTNND1-227ENST00000530748 KALRNO60229 2985 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms