RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 CRYBG3Q68DQ2 2970 aa1.23□□□□□ -2.21
SVIP-203ENST00000529848 CELSR2Q9HCU4 2923 aa1.22□□□□□ -2.21
SVIP-203ENST00000529848 M0R135 149 aa1.22□□□□□ -2.21
SVIP-203ENST00000529848 Q86TA4 180 aa1.22□□□□□ -2.21
SVIP-203ENST00000529848 AMELXQ99217 191 aa1.22□□□□□ -2.21
SVIP-203ENST00000529848 SMR3AQ99954 134 aa1.22□□□□□ -2.21
SVIP-203ENST00000529848 LINC01558Q9Y6Z2 57 aa1.22□□□□□ -2.21
SVIP-203ENST00000529848 ACANP16112 2415 aa1.22□□□□□ -2.21
SVIP-203ENST00000529848 FLNAP21333 2647 aaKnown RBP1.22□□□□□ -2.21
SVIP-203ENST00000529848 ZNF469Q96JG9 3925 aaPredicted RBP1.22□□□□□ -2.21
SVIP-203ENST00000529848 NSD1Q96L73 2696 aaPredicted RBP1.22□□□□□ -2.21
SVIP-203ENST00000529848 JMJD1CQ15652 2540 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 F8VRH5 84 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 PRH1P02810 166 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 RNASE3P12724 160 aaKnown RBP1.21□□□□□ -2.22
SVIP-203ENST00000529848 PDE6GP18545 87 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 SPINK7P58062 85 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 DEFB106AQ8N104 65 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 COX7B2Q8TF08 81 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 AKAP6Q13023 2319 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 CNTRLQ7Z7A1 2325 aa1.21□□□□□ -2.22
SVIP-203ENST00000529848 STAB1Q9NY15 2570 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 TRBV30A0A0K0K1B3 111 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 NBDYA0A0U1RRE5 68 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 ZNF137PP52743 207 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 CAV3P56539 151 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 TFF3Q07654 80 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 NREPQ16612 68 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 COX14Q96I36 57 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 SPRR4Q96PI1 79 aa1.2□□□□□ -2.22
SVIP-203ENST00000529848 ATRQ13535 2644 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 LCE6AA0A183 80 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 TRBV6-4A0A1B0GX49 114 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 COL6A5A8TX70 2615 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 DEFB110Q30KQ9 67 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 ALPK2Q86TB3 2170 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 CCL19Q99731 98 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 LINC00846Q9NV44 126 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 TLN2Q9Y4G6 2542 aa1.19□□□□□ -2.22
SVIP-203ENST00000529848 ANK2Q01484 3957 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 SONP18583 2426 aaKnown RBP1.18□□□□□ -2.22
SVIP-203ENST00000529848 TRAV21A0A0B4J279 112 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 A0A1B0GUT8 65 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 JMJD7-PLA2G4BH0Y9G9 81 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 FCER1GP30273 86 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 FXYD3Q14802 87 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 LINC00322Q6ZN03 302 aaPredicted RBP1.18□□□□□ -2.22
SVIP-203ENST00000529848 TMEM263Q8WUH6 116 aaKnown RBP1.18□□□□□ -2.22
SVIP-203ENST00000529848 Q96NJ1 140 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 LINC00472Q9H8W2 130 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 ABRACLQ9P1F3 81 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 KLK9Q9UKQ9 250 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 R4GMQ9 66 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 NBEAL1Q6ZS30 2694 aa1.18□□□□□ -2.22
SVIP-203ENST00000529848 NIPBLQ6KC79 2804 aaeCLIP1.17□□□□□ -2.22
SVIP-203ENST00000529848 DCHS2Q6V1P9 2916 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 CUBNO60494 3623 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 LINC00959A0A1B0GUT2 108 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 H0Y9P7 68 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 UQCR11O14957 56 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 DNAL4O96015 105 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 STATHP02808 62 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 RPL37AP61513 92 aaKnown RBP1.17□□□□□ -2.22
SVIP-203ENST00000529848 SPATA8Q6RVD6 105 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 ENHOQ6UWT2 76 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 C5orf56Q8N8D9 126 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 WFDC9Q8NEX5 89 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 LINC00208Q96KT6 92 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 OBSCN-AS1Q96MR7 158 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 WFDC6Q9BQY6 131 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 WFDC10AQ9H1F0 79 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 V9GYV3 84 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 USF3Q68DE3 2245 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.17□□□□□ -2.22
SVIP-203ENST00000529848 ABCA1O95477 2261 aa1.17□□□□□ -2.22
SVIP-203ENST00000529848 PRRC2CQ9Y520 2896 aaKnown RBP1.16□□□□□ -2.22
SVIP-203ENST00000529848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.16□□□□□ -2.22
SVIP-203ENST00000529848 CTXND1A0A1B0GTU2 59 aa1.16□□□□□ -2.22
SVIP-203ENST00000529848 SMIM27A0A1W2PRY6 76 aa1.16□□□□□ -2.22
SVIP-203ENST00000529848 C4orf3Q8WVX3 66 aa1.16□□□□□ -2.22
SVIP-203ENST00000529848 VPS13CQ709C8 3753 aa1.16□□□□□ -2.22
SVIP-203ENST00000529848 ANK3Q12955 4377 aaKnown RBP1.16□□□□□ -2.22
SVIP-203ENST00000529848 MXRA5Q9NR99 2828 aa1.16□□□□□ -2.22
SVIP-203ENST00000529848 TACC2O95359 2948 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 TRGV1A0A0A0MS02 117 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 DEFB108AA8MXU0 73 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 MGPP08493 103 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 C10orf113Q5VZT2 155 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 KRTAP4-1Q9BYQ7 146 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 HRNRQ86YZ3 2850 aaPredicted RBP1.15□□□□□ -2.23
SVIP-203ENST00000529848 MGAM2Q2M2H8 2515 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 CADP27708 2225 aa1.15□□□□□ -2.23
SVIP-203ENST00000529848 SVEP1Q4LDE5 3571 aa1.14□□□□□ -2.23
SVIP-203ENST00000529848 TRAV1-2A0A0B4J238 106 aa1.14□□□□□ -2.23
SVIP-203ENST00000529848 TRBV6-1A0A0K0K1D8 114 aa1.14□□□□□ -2.23
SVIP-203ENST00000529848 IGIPA6NJ69 53 aa1.14□□□□□ -2.23
SVIP-203ENST00000529848 H0YGG7 62 aa1.14□□□□□ -2.23
SVIP-203ENST00000529848 M0R1W7 72 aa1.14□□□□□ -2.23
SVIP-203ENST00000529848 NDUFB1O75438 58 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms