RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 HSBP1L1C9JCN9 74 aa7.09□□□□□ -1.27
HIF3A-212ENST00000529205 ELOF1P60002 83 aaKnown RBP7.09□□□□□ -1.27
HIF3A-212ENST00000529205 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
HIF3A-212ENST00000529205 SPANXDQ9BXN6 97 aa7.09□□□□□ -1.27
HIF3A-212ENST00000529205 DLEU1O43261 78 aa7.08□□□□□ -1.28
HIF3A-212ENST00000529205 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
HIF3A-212ENST00000529205 C6orf99Q4VX62 202 aa7.07□□□□□ -1.28
HIF3A-212ENST00000529205 SCGB1D4Q6XE38 83 aa7.06□□□□□ -1.28
HIF3A-212ENST00000529205 MUSTN1Q8IVN3 82 aa7.06□□□□□ -1.28
HIF3A-212ENST00000529205 LINC00518Q8N0U6 118 aa7.06□□□□□ -1.28
HIF3A-212ENST00000529205 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
HIF3A-212ENST00000529205 SMIM6P0DI80 62 aa7.03□□□□□ -1.28
HIF3A-212ENST00000529205 TRBV7-6A0A0J9YX20 115 aa7.02□□□□□ -1.29
HIF3A-212ENST00000529205 A0A0G2JQZ4 141 aa7.01□□□□□ -1.29
HIF3A-212ENST00000529205 A0A1B0GWB2 263 aa7.01□□□□□ -1.29
HIF3A-212ENST00000529205 HIGD1BQ9P298 99 aa7.01□□□□□ -1.29
HIF3A-212ENST00000529205 IGLV5-48A0A075B6I7 105 aa7□□□□□ -1.29
HIF3A-212ENST00000529205 F8WEM9 126 aa6.99□□□□□ -1.29
HIF3A-212ENST00000529205 IFITM1P13164 125 aa6.99□□□□□ -1.29
HIF3A-212ENST00000529205 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
HIF3A-212ENST00000529205 A4D1N5 150 aa6.98□□□□□ -1.29
HIF3A-212ENST00000529205 Q6ZVH6 145 aa6.98□□□□□ -1.29
HIF3A-212ENST00000529205 Q75L30 129 aa6.98□□□□□ -1.29
HIF3A-212ENST00000529205 C12orf57Q99622 126 aa6.98□□□□□ -1.29
HIF3A-212ENST00000529205 TRBV20-1A0A075B6N2 111 aa6.97□□□□□ -1.29
HIF3A-212ENST00000529205 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
HIF3A-212ENST00000529205 FXYD2P54710 66 aa6.96□□□□□ -1.3
HIF3A-212ENST00000529205 COPS9Q8WXC6 57 aa6.96□□□□□ -1.3
HIF3A-212ENST00000529205 OBSCN-AS1Q96MR7 158 aa6.96□□□□□ -1.3
HIF3A-212ENST00000529205 HIST1H4GQ99525 98 aa6.96□□□□□ -1.3
HIF3A-212ENST00000529205 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
HIF3A-212ENST00000529205 A6NDN8 102 aa6.95□□□□□ -1.3
HIF3A-212ENST00000529205 USH2AO75445 5202 aa6.94□□□□□ -1.3
HIF3A-212ENST00000529205 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
HIF3A-212ENST00000529205 CEND1Q8N111 149 aa6.93□□□□□ -1.3
HIF3A-212ENST00000529205 Q6JHZ5 121 aa6.92□□□□□ -1.3
HIF3A-212ENST00000529205 HSD52Q0P140 79 aa6.91□□□□□ -1.3
HIF3A-212ENST00000529205 Q96NJ1 140 aa6.91□□□□□ -1.3
HIF3A-212ENST00000529205 TRBV7-7A0A0K0K1E9 115 aa6.9□□□□□ -1.3
HIF3A-212ENST00000529205 K7ERJ3 54 aa6.89□□□□□ -1.31
HIF3A-212ENST00000529205 BVES-AS1Q5T3Y7 98 aa6.89□□□□□ -1.31
HIF3A-212ENST00000529205 SMIM11BQ8TCY0 68 aa6.89□□□□□ -1.31
HIF3A-212ENST00000529205 CLEC2BQ92478 149 aa6.89□□□□□ -1.31
HIF3A-212ENST00000529205 TRAV13-2A0A0B4J235 113 aa6.88□□□□□ -1.31
HIF3A-212ENST00000529205 VAMP3Q15836 100 aa6.88□□□□□ -1.31
HIF3A-212ENST00000529205 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
HIF3A-212ENST00000529205 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
HIF3A-212ENST00000529205 LST1O00453 97 aa6.87□□□□□ -1.31
HIF3A-212ENST00000529205 A0A0B4J2C4 111 aa6.86□□□□□ -1.31
HIF3A-212ENST00000529205 FAM236DA0A1B0GTK5 79 aa6.85□□□□□ -1.31
HIF3A-212ENST00000529205 FAM236CP0DP71 79 aa6.85□□□□□ -1.31
HIF3A-212ENST00000529205 IGFL1Q6UW32 110 aa6.85□□□□□ -1.31
HIF3A-212ENST00000529205 FCGBPQ9Y6R7 5405 aaPredicted RBP6.85□□□□□ -1.31
HIF3A-212ENST00000529205 MT2AP02795 61 aa6.84□□□□□ -1.31
HIF3A-212ENST00000529205 OCIAD2Q56VL3 154 aa6.83□□□□□ -1.32
HIF3A-212ENST00000529205 C20orf166-AS1Q96NR2 134 aa6.83□□□□□ -1.32
HIF3A-212ENST00000529205 hADV29S1A0JD25 119 aa6.82□□□□□ -1.32
HIF3A-212ENST00000529205 TSTD3H0UI37 97 aa6.82□□□□□ -1.32
HIF3A-212ENST00000529205 Q6ZQY7 126 aa6.82□□□□□ -1.32
HIF3A-212ENST00000529205 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
HIF3A-212ENST00000529205 LINC00575Q6W349 94 aa6.81□□□□□ -1.32
HIF3A-212ENST00000529205 FAM218AQ96MZ4 157 aa6.81□□□□□ -1.32
HIF3A-212ENST00000529205 SS18L2Q9UHA2 77 aa6.81□□□□□ -1.32
HIF3A-212ENST00000529205 PRO1854Q9UHT4 67 aa6.81□□□□□ -1.32
HIF3A-212ENST00000529205 A8MUU9 505 aa6.8□□□□□ -1.32
HIF3A-212ENST00000529205 LCE2BO14633 110 aa6.8□□□□□ -1.32
HIF3A-212ENST00000529205 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
HIF3A-212ENST00000529205 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
HIF3A-212ENST00000529205 SNHG12Q9BXW3 62 aa6.79□□□□□ -1.32
HIF3A-212ENST00000529205 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
HIF3A-212ENST00000529205 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
HIF3A-212ENST00000529205 A6NJY4 79 aa6.78□□□□□ -1.32
HIF3A-212ENST00000529205 TRIAP1O43715 76 aa6.78□□□□□ -1.32
HIF3A-212ENST00000529205 MT1FP04733 61 aa6.77□□□□□ -1.33
HIF3A-212ENST00000529205 PPDPFLQ8WWR9 84 aa6.77□□□□□ -1.33
HIF3A-212ENST00000529205 SYNE2Q8WXH0 6885 aaKnown RBP6.77□□□□□ -1.33
HIF3A-212ENST00000529205 NAA38Q9BRA0 125 aaKnown RBP6.76□□□□□ -1.33
HIF3A-212ENST00000529205 KRTAP9-3Q9BYQ3 159 aa6.76□□□□□ -1.33
HIF3A-212ENST00000529205 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.75□□□□□ -1.33
HIF3A-212ENST00000529205 M0R143 59 aa6.74□□□□□ -1.33
HIF3A-212ENST00000529205 BATFQ16520 125 aa6.73□□□□□ -1.33
HIF3A-212ENST00000529205 PCP4L1A6NKN8 68 aa6.72□□□□□ -1.33
HIF3A-212ENST00000529205 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
HIF3A-212ENST00000529205 H3BUT2 72 aa6.71□□□□□ -1.34
HIF3A-212ENST00000529205 TEN1Q86WV5 123 aa6.71□□□□□ -1.34
HIF3A-212ENST00000529205 DSCR10P59022 87 aa6.7□□□□□ -1.34
HIF3A-212ENST00000529205 MTURNQ8N3F0 131 aa6.69□□□□□ -1.34
HIF3A-212ENST00000529205 SNCGO76070 127 aa6.68□□□□□ -1.34
HIF3A-212ENST00000529205 A0A087WSZ3 146 aa6.67□□□□□ -1.34
HIF3A-212ENST00000529205 H0YGX0 51 aa6.67□□□□□ -1.34
HIF3A-212ENST00000529205 PSMB2P49721 201 aa6.67□□□□□ -1.34
HIF3A-212ENST00000529205 LINC00313P59037 77 aa6.67□□□□□ -1.34
HIF3A-212ENST00000529205 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
HIF3A-212ENST00000529205 SIGMAR1Q99720 223 aa6.66□□□□□ -1.34
HIF3A-212ENST00000529205 MPLKIPQ8TAP9 179 aa6.65□□□□□ -1.34
HIF3A-212ENST00000529205 C9orf118A6NHY6 69 aa6.64□□□□□ -1.35
HIF3A-212ENST00000529205 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
HIF3A-212ENST00000529205 HRES1P13985 223 aa6.64□□□□□ -1.35
HIF3A-212ENST00000529205 A0A1B0GX51 115 aa6.62□□□□□ -1.35
HIF3A-212ENST00000529205 NDUFV3P56181 108 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms