RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 J3KT08 172 aa5.17□□□□□ -1.58
SSBP3-212ENST00000528930 TRIAP1O43715 76 aa5.17□□□□□ -1.58
SSBP3-212ENST00000528930 TRACP01848 142 aa5.17□□□□□ -1.58
SSBP3-212ENST00000528930 TSPEAR-AS2P59090 65 aa5.17□□□□□ -1.58
SSBP3-212ENST00000528930 SPINK6Q6UWN8 80 aa5.17□□□□□ -1.58
SSBP3-212ENST00000528930 LITAFQ99732 161 aa5.17□□□□□ -1.58
SSBP3-212ENST00000528930 HIST1H4AP62805 103 aaKnown RBP5.16□□□□□ -1.58
SSBP3-212ENST00000528930 FAM19A5Q7Z5A7 132 aaPredicted RBP5.16□□□□□ -1.58
SSBP3-212ENST00000528930 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
SSBP3-212ENST00000528930 IGLV5-39A0A0G2JS06 123 aa5.15□□□□□ -1.59
SSBP3-212ENST00000528930 ATOX1O00244 68 aa5.15□□□□□ -1.59
SSBP3-212ENST00000528930 COX7CP15954 63 aa5.15□□□□□ -1.59
SSBP3-212ENST00000528930 Q1RN00 199 aa5.15□□□□□ -1.59
SSBP3-212ENST00000528930 C1orf137Q5JT78 98 aa5.15□□□□□ -1.59
SSBP3-212ENST00000528930 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
SSBP3-212ENST00000528930 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
SSBP3-212ENST00000528930 BCE1O60756 84 aa5.13□□□□□ -1.59
SSBP3-212ENST00000528930 TMEM258P61165 79 aa5.13□□□□□ -1.59
SSBP3-212ENST00000528930 C9orf153Q5TBE3 101 aa5.13□□□□□ -1.59
SSBP3-212ENST00000528930 SFTA2Q6UW10 78 aa5.13□□□□□ -1.59
SSBP3-212ENST00000528930 C22orf24Q9Y442 160 aa5.13□□□□□ -1.59
SSBP3-212ENST00000528930 IGLV7-43P04211 117 aa5.12□□□□□ -1.59
SSBP3-212ENST00000528930 NDUFA12Q9UI09 145 aa5.12□□□□□ -1.59
SSBP3-212ENST00000528930 GAGE2AQ6NT46 116 aa5.11□□□□□ -1.59
SSBP3-212ENST00000528930 REG3GQ6UW15 175 aa5.11□□□□□ -1.59
SSBP3-212ENST00000528930 FAM236AA0A1B0GUQ0 79 aa5.1□□□□□ -1.59
SSBP3-212ENST00000528930 FAM236BA0A1B0GV22 79 aa5.1□□□□□ -1.59
SSBP3-212ENST00000528930 UBE2BP63146 152 aa5.1□□□□□ -1.59
SSBP3-212ENST00000528930 OBSCN-AS1Q96MR7 158 aa5.1□□□□□ -1.59
SSBP3-212ENST00000528930 Q6JHZ5 121 aa5.09□□□□□ -1.59
SSBP3-212ENST00000528930 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 H0Y9J4 135 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 PFN2P35080 140 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 S100A7L2Q5SY68 101 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 ADAMTSL4-AS1Q5T5F5 129 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 MRPL55Q7Z7F7 128 aaKnown RBP5.08□□□□□ -1.6
SSBP3-212ENST00000528930 SERP2Q8N6R1 65 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 DIRC1Q969H9 104 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 ZNF625Q96I27 306 aaPredicted RBP5.08□□□□□ -1.6
SSBP3-212ENST00000528930 LINC00167Q96N53 147 aa5.08□□□□□ -1.6
SSBP3-212ENST00000528930 TRBV10-3A0A0K0K1G6 114 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 H0YGX0 51 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 H7C2G1 150 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 NDUFC2O95298 119 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 BAALC-AS2P0C853 105 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 RPL28P46779 137 aaKnown RBP5.07□□□□□ -1.6
SSBP3-212ENST00000528930 COX17Q14061 63 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 ATP5EP2Q5VTU8 51 aa5.07□□□□□ -1.6
SSBP3-212ENST00000528930 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
SSBP3-212ENST00000528930 ZNF861PO60384 105 aa5.06□□□□□ -1.6
SSBP3-212ENST00000528930 LINC00308Q8TCZ7 52 aa5.06□□□□□ -1.6
SSBP3-212ENST00000528930 SND1-IT1Q9HBX3 110 aa5.06□□□□□ -1.6
SSBP3-212ENST00000528930 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
SSBP3-212ENST00000528930 VPREB1P12018 145 aa5.05□□□□□ -1.6
SSBP3-212ENST00000528930 Q8NDZ9 215 aa5.05□□□□□ -1.6
SSBP3-212ENST00000528930 PRR26Q8N8Z3 221 aa5.04□□□□□ -1.6
SSBP3-212ENST00000528930 SMCR5Q8TEV8 140 aa5.04□□□□□ -1.6
SSBP3-212ENST00000528930 CLEC2BQ92478 149 aa5.04□□□□□ -1.6
SSBP3-212ENST00000528930 NKAPP1Q8N9T2 125 aa5.03□□□□□ -1.6
SSBP3-212ENST00000528930 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
SSBP3-212ENST00000528930 IGLV1-50A0A075B6I6 118 aa5.02□□□□□ -1.61
SSBP3-212ENST00000528930 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
SSBP3-212ENST00000528930 LINC01547P58512 204 aaPredicted RBP5.02□□□□□ -1.61
SSBP3-212ENST00000528930 LINC00158P58513 81 aa5.02□□□□□ -1.61
SSBP3-212ENST00000528930 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
SSBP3-212ENST00000528930 IGKV2-28A0A075B6P5 120 aa5.01□□□□□ -1.61
SSBP3-212ENST00000528930 hADV29S1A0JD25 119 aa5.01□□□□□ -1.61
SSBP3-212ENST00000528930 H3BQ85 93 aa5.01□□□□□ -1.61
SSBP3-212ENST00000528930 IGKV2D-28P01615 120 aa5.01□□□□□ -1.61
SSBP3-212ENST00000528930 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
SSBP3-212ENST00000528930 JMJD7-PLA2G4BH0Y9G9 81 aa5□□□□□ -1.61
SSBP3-212ENST00000528930 MIR7-3HGQ8N6C7 128 aa5□□□□□ -1.61
SSBP3-212ENST00000528930 M0R378 163 aa4.99□□□□□ -1.61
SSBP3-212ENST00000528930 DNAL4O96015 105 aa4.99□□□□□ -1.61
SSBP3-212ENST00000528930 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
SSBP3-212ENST00000528930 A0A087X002 238 aa4.98□□□□□ -1.61
SSBP3-212ENST00000528930 CCKP06307 115 aa4.98□□□□□ -1.61
SSBP3-212ENST00000528930 UBE2AP49459 152 aa4.98□□□□□ -1.61
SSBP3-212ENST00000528930 PRLHP81277 87 aa4.98□□□□□ -1.61
SSBP3-212ENST00000528930 PRR4Q16378 134 aa4.97□□□□□ -1.61
SSBP3-212ENST00000528930 FAM19A1Q7Z5A9 133 aa4.97□□□□□ -1.61
SSBP3-212ENST00000528930 SERP1Q9Y6X1 66 aa4.97□□□□□ -1.61
SSBP3-212ENST00000528930 NDUFC1O43677 76 aa4.96□□□□□ -1.62
SSBP3-212ENST00000528930 ATP5EP56381 51 aaPredicted RBP4.96□□□□□ -1.62
SSBP3-212ENST00000528930 Q5XG85 94 aa4.96□□□□□ -1.62
SSBP3-212ENST00000528930 SOSTDC1Q6X4U4 206 aa4.96□□□□□ -1.62
SSBP3-212ENST00000528930 ANAPC11Q9NYG5 84 aa4.96□□□□□ -1.62
SSBP3-212ENST00000528930 PRO0628Q9UI54 55 aa4.96□□□□□ -1.62
SSBP3-212ENST00000528930 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
SSBP3-212ENST00000528930 NCR3O14931 201 aa4.95□□□□□ -1.62
SSBP3-212ENST00000528930 PDE6GP18545 87 aa4.95□□□□□ -1.62
SSBP3-212ENST00000528930 SPRR1AP35321 89 aa4.95□□□□□ -1.62
SSBP3-212ENST00000528930 NPC2P61916 151 aa4.95□□□□□ -1.62
SSBP3-212ENST00000528930 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
SSBP3-212ENST00000528930 FAM218AQ96MZ4 157 aa4.95□□□□□ -1.62
SSBP3-212ENST00000528930 KCNQ1DNQ9H478 68 aa4.95□□□□□ -1.62
SSBP3-212ENST00000528930 TRAV7A0A075B6U4 112 aa4.94□□□□□ -1.62
SSBP3-212ENST00000528930 KRTAP4-16G5E9R7 235 aaPredicted RBP4.94□□□□□ -1.62
SSBP3-212ENST00000528930 TMEM256-PLSCR3K7ERE1 68 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms