RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SNHG12Q9BXW3 62 aa7.93□□□□□ -1.14
CAPN1-216ENST00000528739 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
CAPN1-216ENST00000528739 MUC17Q685J3 4493 aa7.92□□□□□ -1.14
CAPN1-216ENST00000528739 C9orf92A6NGG3 77 aa7.92□□□□□ -1.14
CAPN1-216ENST00000528739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.92□□□□□ -1.14
CAPN1-216ENST00000528739 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
CAPN1-216ENST00000528739 A6NJY4 79 aa7.91□□□□□ -1.14
CAPN1-216ENST00000528739 C2orf91Q6ZV80 131 aa7.91□□□□□ -1.14
CAPN1-216ENST00000528739 CEND1Q8N111 149 aa7.91□□□□□ -1.14
CAPN1-216ENST00000528739 A0A0B4J2C4 111 aa7.9□□□□□ -1.14
CAPN1-216ENST00000528739 TCL1BO95988 128 aa7.9□□□□□ -1.14
CAPN1-216ENST00000528739 ASB16-AS1Q495Z4 193 aa7.9□□□□□ -1.14
CAPN1-216ENST00000528739 XP32Q5T750 250 aa7.89□□□□□ -1.15
CAPN1-216ENST00000528739 H0YGX0 51 aa7.88□□□□□ -1.15
CAPN1-216ENST00000528739 OCIAD2Q56VL3 154 aa7.88□□□□□ -1.15
CAPN1-216ENST00000528739 Q6JHZ5 121 aa7.88□□□□□ -1.15
CAPN1-216ENST00000528739 PRO1854Q9UHT4 67 aa7.87□□□□□ -1.15
CAPN1-216ENST00000528739 PYY3Q5JQD4 70 aa7.86□□□□□ -1.15
CAPN1-216ENST00000528739 C1orf195Q5TG92 126 aa7.86□□□□□ -1.15
CAPN1-216ENST00000528739 Q5XG85 94 aa7.86□□□□□ -1.15
CAPN1-216ENST00000528739 FXYD2P54710 66 aa7.85□□□□□ -1.15
CAPN1-216ENST00000528739 IGFL1Q6UW32 110 aa7.85□□□□□ -1.15
CAPN1-216ENST00000528739 PPDPFLQ8WWR9 84 aa7.85□□□□□ -1.15
CAPN1-216ENST00000528739 CLEC2BQ92478 149 aa7.85□□□□□ -1.15
CAPN1-216ENST00000528739 H3BUT2 72 aa7.84□□□□□ -1.15
CAPN1-216ENST00000528739 PSMB2P49721 201 aa7.82□□□□□ -1.16
CAPN1-216ENST00000528739 HSD52Q0P140 79 aa7.82□□□□□ -1.16
CAPN1-216ENST00000528739 FAM218AQ96MZ4 157 aa7.82□□□□□ -1.16
CAPN1-216ENST00000528739 IGLV8-61A0A075B6I0 122 aa7.81□□□□□ -1.16
CAPN1-216ENST00000528739 TRBV7-7A0A0K0K1E9 115 aa7.81□□□□□ -1.16
CAPN1-216ENST00000528739 GHRHP01286 108 aa7.81□□□□□ -1.16
CAPN1-216ENST00000528739 FABP2P12104 132 aa7.81□□□□□ -1.16
CAPN1-216ENST00000528739 NDUFV3P56181 108 aaKnown RBP7.79□□□□□ -1.16
CAPN1-216ENST00000528739 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
CAPN1-216ENST00000528739 UQCR10Q9UDW1 63 aa7.79□□□□□ -1.16
CAPN1-216ENST00000528739 TRIAP1O43715 76 aa7.78□□□□□ -1.16
CAPN1-216ENST00000528739 KRTAP4-1Q9BYQ7 146 aa7.78□□□□□ -1.16
CAPN1-216ENST00000528739 FAT4Q6V0I7 4981 aa7.77□□□□□ -1.17
CAPN1-216ENST00000528739 A0A1B0GX51 115 aa7.77□□□□□ -1.17
CAPN1-216ENST00000528739 K7ERJ3 54 aa7.77□□□□□ -1.17
CAPN1-216ENST00000528739 DNAL4O96015 105 aa7.77□□□□□ -1.17
CAPN1-216ENST00000528739 H3BMG7 143 aa7.76□□□□□ -1.17
CAPN1-216ENST00000528739 COX6CP09669 75 aa7.76□□□□□ -1.17
CAPN1-216ENST00000528739 LST1O00453 97 aa7.75□□□□□ -1.17
CAPN1-216ENST00000528739 A0A1B0GV72 72 aa7.73□□□□□ -1.17
CAPN1-216ENST00000528739 SCGB1C2P0DMR2 95 aa7.72□□□□□ -1.17
CAPN1-216ENST00000528739 TEN1Q86WV5 123 aa7.72□□□□□ -1.17
CAPN1-216ENST00000528739 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
CAPN1-216ENST00000528739 SS18L2Q9UHA2 77 aa7.72□□□□□ -1.17
CAPN1-216ENST00000528739 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
CAPN1-216ENST00000528739 A0A087WSZ3 146 aa7.7□□□□□ -1.18
CAPN1-216ENST00000528739 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
CAPN1-216ENST00000528739 OBSCN-AS1Q96MR7 158 aa7.69□□□□□ -1.18
CAPN1-216ENST00000528739 H3BQ85 93 aa7.68□□□□□ -1.18
CAPN1-216ENST00000528739 Q6Q795 121 aa7.68□□□□□ -1.18
CAPN1-216ENST00000528739 ANKRD29Q8N6D5 301 aa7.68□□□□□ -1.18
CAPN1-216ENST00000528739 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
CAPN1-216ENST00000528739 Q96NJ1 140 aa7.65□□□□□ -1.18
CAPN1-216ENST00000528739 ATP11AUNQ6ZP68 121 aa7.63□□□□□ -1.19
CAPN1-216ENST00000528739 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
CAPN1-216ENST00000528739 SIGMAR1Q99720 223 aa7.61□□□□□ -1.19
CAPN1-216ENST00000528739 VPS25Q9BRG1 176 aa7.61□□□□□ -1.19
CAPN1-216ENST00000528739 M0R143 59 aa7.6□□□□□ -1.19
CAPN1-216ENST00000528739 TRACP01848 142 aa7.6□□□□□ -1.19
CAPN1-216ENST00000528739 CCKP06307 115 aa7.59□□□□□ -1.19
CAPN1-216ENST00000528739 UBE2V1Q13404 147 aa7.59□□□□□ -1.19
CAPN1-216ENST00000528739 TRBV7-4A0A0J9YYF1 115 aa7.58□□□□□ -1.2
CAPN1-216ENST00000528739 COX6B2Q6YFQ2 88 aa7.58□□□□□ -1.2
CAPN1-216ENST00000528739 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
CAPN1-216ENST00000528739 Q75L30 129 aa7.57□□□□□ -1.2
CAPN1-216ENST00000528739 DSCR8Q96T75 97 aa7.57□□□□□ -1.2
CAPN1-216ENST00000528739 NAA38Q9BRA0 125 aaKnown RBP7.57□□□□□ -1.2
CAPN1-216ENST00000528739 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
CAPN1-216ENST00000528739 DSCR10P59022 87 aa7.56□□□□□ -1.2
CAPN1-216ENST00000528739 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
CAPN1-216ENST00000528739 SMIM6P0DI80 62 aa7.55□□□□□ -1.2
CAPN1-216ENST00000528739 DEFB116Q30KQ4 102 aa7.55□□□□□ -1.2
CAPN1-216ENST00000528739 KRTAP9-2Q9BYQ4 174 aa7.55□□□□□ -1.2
CAPN1-216ENST00000528739 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
CAPN1-216ENST00000528739 BATFQ16520 125 aa7.53□□□□□ -1.2
CAPN1-216ENST00000528739 TSTD3H0UI37 97 aa7.52□□□□□ -1.21
CAPN1-216ENST00000528739 LINC00313P59037 77 aa7.52□□□□□ -1.21
CAPN1-216ENST00000528739 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
CAPN1-216ENST00000528739 C9JAW5 83 aa7.5□□□□□ -1.21
CAPN1-216ENST00000528739 M0R2T5 61 aa7.5□□□□□ -1.21
CAPN1-216ENST00000528739 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
CAPN1-216ENST00000528739 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
CAPN1-216ENST00000528739 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
CAPN1-216ENST00000528739 MT1HP80294 61 aa7.48□□□□□ -1.21
CAPN1-216ENST00000528739 A8MUU9 505 aa7.47□□□□□ -1.21
CAPN1-216ENST00000528739 LYRM7Q5U5X0 104 aa7.47□□□□□ -1.21
CAPN1-216ENST00000528739 LINC00472Q9H8W2 130 aa7.47□□□□□ -1.21
CAPN1-216ENST00000528739 JMJD7-PLA2G4BH0Y9G9 81 aa7.44□□□□□ -1.22
CAPN1-216ENST00000528739 TRBV20-1A0A075B6N2 111 aa7.43□□□□□ -1.22
CAPN1-216ENST00000528739 C21orf62-AS1Q17RA5 79 aa7.43□□□□□ -1.22
CAPN1-216ENST00000528739 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
CAPN1-216ENST00000528739 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
CAPN1-216ENST00000528739 A0A1B0GVX0 72 aa7.39□□□□□ -1.23
CAPN1-216ENST00000528739 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
CAPN1-216ENST00000528739 J3KT08 172 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms