RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 HECTD1Q9ULT8 2610 aa4.52□□□□□ -1.69
CTNND1-218ENST00000528232 UNC80Q8N2C7 3258 aa4.52□□□□□ -1.69
CTNND1-218ENST00000528232 HRES1P13985 223 aa4.51□□□□□ -1.69
CTNND1-218ENST00000528232 ANAPC11Q9NYG5 84 aa4.51□□□□□ -1.69
CTNND1-218ENST00000528232 TNP2Q05952 138 aa4.51□□□□□ -1.69
CTNND1-218ENST00000528232 Q8NDZ9 215 aa4.51□□□□□ -1.69
CTNND1-218ENST00000528232 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
CTNND1-218ENST00000528232 SPRR1AP35321 89 aa4.5□□□□□ -1.69
CTNND1-218ENST00000528232 CDH23Q9H251 3354 aa4.5□□□□□ -1.69
CTNND1-218ENST00000528232 MGAM2Q2M2H8 2515 aa4.49□□□□□ -1.69
CTNND1-218ENST00000528232 FLNAP21333 2647 aaKnown RBP4.49□□□□□ -1.69
CTNND1-218ENST00000528232 ROMO1P60602 79 aa4.49□□□□□ -1.69
CTNND1-218ENST00000528232 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
CTNND1-218ENST00000528232 ATRQ13535 2644 aa4.48□□□□□ -1.69
CTNND1-218ENST00000528232 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
CTNND1-218ENST00000528232 KRTAP3-3Q9BYR6 98 aa4.47□□□□□ -1.69
CTNND1-218ENST00000528232 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
CTNND1-218ENST00000528232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
CTNND1-218ENST00000528232 KRTAP26-1Q6PEX3 210 aa4.47□□□□□ -1.69
CTNND1-218ENST00000528232 CENPEQ02224 2701 aa4.47□□□□□ -1.69
CTNND1-218ENST00000528232 ZNF292O60281 2723 aa4.46□□□□□ -1.7
CTNND1-218ENST00000528232 MMP24-AS1A0A0U1RRL7 71 aa4.46□□□□□ -1.7
CTNND1-218ENST00000528232 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
CTNND1-218ENST00000528232 ITPR3Q14573 2671 aa4.45□□□□□ -1.7
CTNND1-218ENST00000528232 FLG2Q5D862 2391 aaPredicted RBP4.45□□□□□ -1.7
CTNND1-218ENST00000528232 CFAP54Q96N23 3096 aa4.45□□□□□ -1.7
CTNND1-218ENST00000528232 SMR3BP02814 79 aaPredicted RBP4.44□□□□□ -1.7
CTNND1-218ENST00000528232 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
CTNND1-218ENST00000528232 SPRR1BP22528 89 aa4.44□□□□□ -1.7
CTNND1-218ENST00000528232 MAST4O15021 2626 aa4.43□□□□□ -1.7
CTNND1-218ENST00000528232 PRUNE2Q8WUY3 3088 aa4.43□□□□□ -1.7
CTNND1-218ENST00000528232 LCE6AA0A183 80 aa4.43□□□□□ -1.7
CTNND1-218ENST00000528232 DNAH14Q0VDD8 3507 aa4.42□□□□□ -1.7
CTNND1-218ENST00000528232 AKAP13Q12802 2813 aa4.42□□□□□ -1.7
CTNND1-218ENST00000528232 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
CTNND1-218ENST00000528232 Q6ZR54 194 aa4.4□□□□□ -1.7
CTNND1-218ENST00000528232 SZT2Q5T011 3432 aa4.4□□□□□ -1.71
CTNND1-218ENST00000528232 KRTAP1-5Q9BYS1 174 aa4.4□□□□□ -1.71
CTNND1-218ENST00000528232 MGAQ8IWI9 3026 aa4.39□□□□□ -1.71
CTNND1-218ENST00000528232 TRIOO75962 3097 aa4.39□□□□□ -1.71
CTNND1-218ENST00000528232 XIRP2A4UGR9 3374 aa4.39□□□□□ -1.71
CTNND1-218ENST00000528232 Q6ZSA8 131 aa4.39□□□□□ -1.71
CTNND1-218ENST00000528232 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
CTNND1-218ENST00000528232 HELZ2Q9BYK8 2649 aaKnown RBP4.36□□□□□ -1.71
CTNND1-218ENST00000528232 WDFY4Q6ZS81 3184 aa4.36□□□□□ -1.71
CTNND1-218ENST00000528232 M0R2T5 61 aa4.36□□□□□ -1.71
CTNND1-218ENST00000528232 S4R3F8 94 aa4.36□□□□□ -1.71
CTNND1-218ENST00000528232 H1FX-AS1Q4G0G2 97 aa4.35□□□□□ -1.71
CTNND1-218ENST00000528232 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
CTNND1-218ENST00000528232 LAMA1P25391 3075 aa4.34□□□□□ -1.71
CTNND1-218ENST00000528232 CFAP46Q8IYW2 2715 aa4.34□□□□□ -1.71
CTNND1-218ENST00000528232 KRTAP29-1A8MX34 341 aaPredicted RBP4.34□□□□□ -1.71
CTNND1-218ENST00000528232 Q5W150 140 aa4.34□□□□□ -1.71
CTNND1-218ENST00000528232 MAP1AP78559 2803 aaPredicted RBP4.33□□□□□ -1.72
CTNND1-218ENST00000528232 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
CTNND1-218ENST00000528232 VCANP13611 3396 aa4.32□□□□□ -1.72
CTNND1-218ENST00000528232 SPTBN5Q9NRC6 3674 aaKnown RBP4.3□□□□□ -1.72
CTNND1-218ENST00000528232 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
CTNND1-218ENST00000528232 REV3LO60673 3130 aa4.29□□□□□ -1.72
CTNND1-218ENST00000528232 IGSF10Q6WRI0 2623 aa4.28□□□□□ -1.72
CTNND1-218ENST00000528232 TEP1Q99973 2627 aaKnown RBP4.27□□□□□ -1.73
CTNND1-218ENST00000528232 R4GN34 69 aa4.27□□□□□ -1.73
CTNND1-218ENST00000528232 VPS13AQ96RL7 3174 aa4.27□□□□□ -1.73
CTNND1-218ENST00000528232 CHD6Q8TD26 2715 aa4.27□□□□□ -1.73
CTNND1-218ENST00000528232 KRTAP10-1P60331 282 aa4.27□□□□□ -1.73
CTNND1-218ENST00000528232 PANO1I0J062 215 aa4.26□□□□□ -1.73
CTNND1-218ENST00000528232 CELSR3Q9NYQ7 3312 aa4.26□□□□□ -1.73
CTNND1-218ENST00000528232 KRTAP10-2P60368 255 aa4.26□□□□□ -1.73
CTNND1-218ENST00000528232 SETXQ7Z333 2677 aaKnown RBP4.26□□□□□ -1.73
CTNND1-218ENST00000528232 FREM2Q5SZK8 3169 aa4.25□□□□□ -1.73
CTNND1-218ENST00000528232 SPEGQ15772 3267 aa4.24□□□□□ -1.73
CTNND1-218ENST00000528232 DSPP15924 2871 aaKnown RBP4.24□□□□□ -1.73
CTNND1-218ENST00000528232 EYSQ5T1H1 3165 aa4.23□□□□□ -1.73
CTNND1-218ENST00000528232 TEX15Q9BXT5 2789 aa4.23□□□□□ -1.73
CTNND1-218ENST00000528232 Q6ZRN7 208 aaPredicted RBP4.22□□□□□ -1.73
CTNND1-218ENST00000528232 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
CTNND1-218ENST00000528232 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
CTNND1-218ENST00000528232 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.73
CTNND1-218ENST00000528232 FRYQ5TBA9 3013 aa4.21□□□□□ -1.74
CTNND1-218ENST00000528232 TNRC18O15417 2968 aaPredicted RBP4.2□□□□□ -1.74
CTNND1-218ENST00000528232 M0QZ58 72 aa4.19□□□□□ -1.74
CTNND1-218ENST00000528232 KRTAP11-1Q8IUC1 163 aa4.19□□□□□ -1.74
CTNND1-218ENST00000528232 STAB1Q9NY15 2570 aa4.19□□□□□ -1.74
CTNND1-218ENST00000528232 GCN1Q92616 2671 aaKnown RBP4.19□□□□□ -1.74
CTNND1-218ENST00000528232 UNC79Q9P2D8 2635 aa4.19□□□□□ -1.74
CTNND1-218ENST00000528232 FRYLO94915 3013 aa4.19□□□□□ -1.74
CTNND1-218ENST00000528232 Q5VSD8 79 aa4.18□□□□□ -1.74
CTNND1-218ENST00000528232 A8MUU9 505 aa4.18□□□□□ -1.74
CTNND1-218ENST00000528232 MYO15AQ9UKN7 3530 aa4.17□□□□□ -1.74
CTNND1-218ENST00000528232 KMT2BQ9UMN6 2715 aaPredicted RBP4.17□□□□□ -1.74
CTNND1-218ENST00000528232 KRTAP13-1Q8IUC0 172 aa4.17□□□□□ -1.74
CTNND1-218ENST00000528232 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
CTNND1-218ENST00000528232 USP34Q70CQ2 3546 aa4.16□□□□□ -1.74
CTNND1-218ENST00000528232 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
CTNND1-218ENST00000528232 COL6A5A8TX70 2615 aa4.15□□□□□ -1.74
CTNND1-218ENST00000528232 NBEAQ8NFP9 2946 aa4.15□□□□□ -1.74
CTNND1-218ENST00000528232 NOTCH1P46531 2555 aa4.15□□□□□ -1.74
CTNND1-218ENST00000528232 LCE2BO14633 110 aa4.15□□□□□ -1.74
CTNND1-218ENST00000528232 COL6A3P12111 3177 aa4.15□□□□□ -1.75
CTNND1-218ENST00000528232 A8MU10 97 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms