RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 PDZD2O15018 2839 aa2.38□□□□□ -2.03
NXF1-205ENST00000527497 HIVEP3Q5T1R4 2406 aa2.38□□□□□ -2.03
NXF1-205ENST00000527497 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
NXF1-205ENST00000527497 DCHS2Q6V1P9 2916 aa2.38□□□□□ -2.03
NXF1-205ENST00000527497 JMJD1CQ15652 2540 aa2.38□□□□□ -2.03
NXF1-205ENST00000527497 NCOA6Q14686 2063 aaPredicted RBP2.37□□□□□ -2.03
NXF1-205ENST00000527497 STAB1Q9NY15 2570 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 VPS13CQ709C8 3753 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 A0A096LNT2 108 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 GNGT1P63211 74 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 SMIM11BQ8TCY0 68 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 HILPDAQ9Y5L2 63 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 OTOGQ6ZRI0 2925 aa2.37□□□□□ -2.03
NXF1-205ENST00000527497 NIPBLQ6KC79 2804 aaeCLIP2.36□□□□□ -2.03
NXF1-205ENST00000527497 ZNF469Q96JG9 3925 aaPredicted RBP2.36□□□□□ -2.03
NXF1-205ENST00000527497 F8P00451 2351 aa2.36□□□□□ -2.03
NXF1-205ENST00000527497 APCP25054 2843 aa2.36□□□□□ -2.03
NXF1-205ENST00000527497 MED13LQ71F56 2210 aa2.36□□□□□ -2.03
NXF1-205ENST00000527497 CCDC168Q8NDH2 2452 aa2.35□□□□□ -2.03
NXF1-205ENST00000527497 H3BVH4 76 aa2.35□□□□□ -2.03
NXF1-205ENST00000527497 SPINK7P58062 85 aa2.35□□□□□ -2.03
NXF1-205ENST00000527497 SPINK13Q1W4C9 94 aa2.35□□□□□ -2.03
NXF1-205ENST00000527497 C10orf113Q5VZT2 155 aa2.35□□□□□ -2.03
NXF1-205ENST00000527497 PKD1L1Q8TDX9 2849 aa2.35□□□□□ -2.03
NXF1-205ENST00000527497 PRB1P04280 392 aa2.34□□□□□ -2.03
NXF1-205ENST00000527497 Q6ZRX8 168 aa2.34□□□□□ -2.03
NXF1-205ENST00000527497 HIVEP1P15822 2718 aa2.33□□□□□ -2.04
NXF1-205ENST00000527497 DNAJC13O75165 2243 aa2.33□□□□□ -2.04
NXF1-205ENST00000527497 GVQW2A0A096LPI5 108 aaPredicted RBP2.33□□□□□ -2.04
NXF1-205ENST00000527497 NDUFB1O75438 58 aa2.33□□□□□ -2.04
NXF1-205ENST00000527497 C3orf79P0CE67 100 aa2.33□□□□□ -2.04
NXF1-205ENST00000527497 ANKHD1Q8IWZ3 2542 aaKnown RBP2.33□□□□□ -2.04
NXF1-205ENST00000527497 DEFB124Q8NES8 71 aa2.32□□□□□ -2.04
NXF1-205ENST00000527497 GNG13Q9P2W3 67 aa2.32□□□□□ -2.04
NXF1-205ENST00000527497 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
NXF1-205ENST00000527497 LYNX1P0DP58 116 aa2.31□□□□□ -2.04
NXF1-205ENST00000527497 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
NXF1-205ENST00000527497 NBEAL2Q6ZNJ1 2754 aa2.31□□□□□ -2.04
NXF1-205ENST00000527497 ACANP16112 2415 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 TRBV6-1A0A0K0K1D8 114 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 G3V318 75 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 PIN1P1O15428 100 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 S100A3P33764 101 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 CNTRLQ7Z7A1 2325 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 FLNAP21333 2647 aaKnown RBP2.3□□□□□ -2.04
NXF1-205ENST00000527497 HRNRQ86YZ3 2850 aaPredicted RBP2.3□□□□□ -2.04
NXF1-205ENST00000527497 ANK2Q01484 3957 aa2.3□□□□□ -2.04
NXF1-205ENST00000527497 ZANQ9Y493 2812 aa2.29□□□□□ -2.04
NXF1-205ENST00000527497 NSD1Q96L73 2696 aaPredicted RBP2.29□□□□□ -2.04
NXF1-205ENST00000527497 TLN2Q9Y4G6 2542 aa2.29□□□□□ -2.04
NXF1-205ENST00000527497 AKAP6Q13023 2319 aa2.29□□□□□ -2.04
NXF1-205ENST00000527497 PKDREJQ9NTG1 2253 aa2.29□□□□□ -2.04
NXF1-205ENST00000527497 CACNA1CQ13936 2221 aa2.28□□□□□ -2.04
NXF1-205ENST00000527497 LY6G6CO95867 125 aa2.28□□□□□ -2.04
NXF1-205ENST00000527497 IFI6P09912 130 aa2.28□□□□□ -2.04
NXF1-205ENST00000527497 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
NXF1-205ENST00000527497 RPL37P61927 97 aaKnown RBP2.28□□□□□ -2.04
NXF1-205ENST00000527497 KRTAP21-3Q3LHN1 58 aa2.28□□□□□ -2.04
NXF1-205ENST00000527497 TRAV21A0A0B4J279 112 aa2.27□□□□□ -2.05
NXF1-205ENST00000527497 HAMPP81172 84 aa2.27□□□□□ -2.05
NXF1-205ENST00000527497 HIVEP2P31629 2446 aa2.26□□□□□ -2.05
NXF1-205ENST00000527497 FXYD6-FXYD2A0A087WZ82 144 aa2.26□□□□□ -2.05
NXF1-205ENST00000527497 ANGP03950 147 aaKnown RBP2.26□□□□□ -2.05
NXF1-205ENST00000527497 HMGA1P17096 107 aaKnown RBP2.26□□□□□ -2.05
NXF1-205ENST00000527497 COL6A5A8TX70 2615 aa2.26□□□□□ -2.05
NXF1-205ENST00000527497 ABCA1O95477 2261 aa2.26□□□□□ -2.05
NXF1-205ENST00000527497 CUBNO60494 3623 aa2.25□□□□□ -2.05
NXF1-205ENST00000527497 A0A1B0GU69 56 aa2.25□□□□□ -2.05
NXF1-205ENST00000527497 DEFB112Q30KQ8 113 aa2.25□□□□□ -2.05
NXF1-205ENST00000527497 WFDC9Q8NEX5 89 aa2.25□□□□□ -2.05
NXF1-205ENST00000527497 FLG2Q5D862 2391 aaPredicted RBP2.25□□□□□ -2.05
NXF1-205ENST00000527497 MXRA5Q9NR99 2828 aa2.25□□□□□ -2.05
NXF1-205ENST00000527497 TGP01266 2768 aa2.24□□□□□ -2.05
NXF1-205ENST00000527497 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
NXF1-205ENST00000527497 Q6ZSA8 131 aa2.24□□□□□ -2.05
NXF1-205ENST00000527497 ANK3Q12955 4377 aaKnown RBP2.24□□□□□ -2.05
NXF1-205ENST00000527497 CMYA5Q8N3K9 4069 aa2.23□□□□□ -2.05
NXF1-205ENST00000527497 NREPQ16612 68 aa2.23□□□□□ -2.05
NXF1-205ENST00000527497 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
NXF1-205ENST00000527497 GAFA1Q96PS6 74 aa2.23□□□□□ -2.05
NXF1-205ENST00000527497 SVEP1Q4LDE5 3571 aa2.23□□□□□ -2.05
NXF1-205ENST00000527497 SONP18583 2426 aaKnown RBP2.22□□□□□ -2.05
NXF1-205ENST00000527497 CSPG4Q6UVK1 2322 aa2.22□□□□□ -2.05
NXF1-205ENST00000527497 K7EIL1 84 aa2.2□□□□□ -2.06
NXF1-205ENST00000527497 FAM103A1Q9BTL3 118 aaKnown RBP2.2□□□□□ -2.06
NXF1-205ENST00000527497 U3KQA8 63 aa2.2□□□□□ -2.06
NXF1-205ENST00000527497 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
NXF1-205ENST00000527497 LCE6AA0A183 80 aa2.19□□□□□ -2.06
NXF1-205ENST00000527497 LINC00959A0A1B0GUT2 108 aa2.19□□□□□ -2.06
NXF1-205ENST00000527497 FXYD6P3P58550 94 aa2.19□□□□□ -2.06
NXF1-205ENST00000527497 SSBP3-AS1Q7Z2R9 100 aa2.19□□□□□ -2.06
NXF1-205ENST00000527497 PRKDCP78527 4128 aaKnown RBP2.19□□□□□ -2.06
NXF1-205ENST00000527497 SORL1Q92673 2214 aa2.18□□□□□ -2.06
NXF1-205ENST00000527497 TENM1Q9UKZ4 2725 aa2.18□□□□□ -2.06
NXF1-205ENST00000527497 UBE2DNLQ8IWF7 75 aa2.17□□□□□ -2.06
NXF1-205ENST00000527497 TRRAPQ9Y4A5 3859 aa2.17□□□□□ -2.06
NXF1-205ENST00000527497 MEGF8Q7Z7M0 2845 aa2.16□□□□□ -2.06
NXF1-205ENST00000527497 MGAM2Q2M2H8 2515 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms