RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 SPINK9Q5DT21 86 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 NMSQ5H8A3 153 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 UNQ6190/PRO20217Q6UXQ8 127 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 C5orf56Q8N8D9 126 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 OBSCN-AS1Q96MR7 158 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 TRGV9Q99603 122 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 CACFD1Q9UGQ2 172 aa1.72□□□□□ -2.13
CLNS1A-208ENST00000527265 C7orf77A4D0Y5 90 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 PRH1P02810 166 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 ELOF1P60002 83 aaKnown RBP1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 UBE2D3P61077 147 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 UBE2D2P62837 147 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 TFF3Q07654 80 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 BPESC1Q9GZL8 116 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 PRO1854Q9UHT4 67 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 RABAC1Q9UI14 185 aa1.71□□□□□ -2.14
CLNS1A-208ENST00000527265 DYNC2H1Q8NCM8 4307 aaKnown RBP1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 DEFB108AA8MXU0 73 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 PPP1R17O96001 155 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 EDDM3BP56851 147 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 PMCHL1Q16048 86 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 DEFB109BQ30KR1 87 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 SFTA2Q6UW10 78 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 HEPN1Q6WQI6 88 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 Q8N6K4 173 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 FDCSPQ8NFU4 85 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 LEAP2Q969E1 77 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 DYNLRB1Q9NP97 96 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 NDUFA4L2Q9NRX3 87 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 GNG13Q9P2W3 67 aa1.7□□□□□ -2.14
CLNS1A-208ENST00000527265 IQCF6A8MYZ5 107 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 SYS1-DBNDD2H3BUS1 97 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 KRTAP10-10P60014 251 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 PRB3Q04118 309 aaPredicted RBP1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 RPL39P5Q59GN2 51 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 FAM74A4Q5TZK3 123 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 NXT2Q9NPJ8 142 aaKnown RBP1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 CDC42SE2Q9NRR3 84 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 PSENENQ9NZ42 101 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 UQCR10Q9UDW1 63 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 LENEPQ9Y5L5 61 aa1.69□□□□□ -2.14
CLNS1A-208ENST00000527265 DMBT1Q9UGM3 2413 aaPredicted RBP1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 A0A087WTM6 91 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 CEBPZOSA8MTT3 80 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 H7BZZ5 65 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 SPAG11BQ08648 103 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 SPAG11AQ6PDA7 123 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 DEFB108BQ8NET1 73 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 V9GYV3 84 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 CMYA5Q8N3K9 4069 aa1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 ANK3Q12955 4377 aaKnown RBP1.68□□□□□ -2.14
CLNS1A-208ENST00000527265 SACSQ9NZJ4 4579 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 IGLC7A0M8Q6 106 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 F2Z2F3 143 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 COX6CP09669 75 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 SAA2P0DJI9 122 aaPredicted RBP1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 ARL14EPLP0DKL9 152 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 SERF2P84101 59 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 ADIRFQ15847 76 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 GAFA1Q96PS6 74 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 SORL1Q92673 2214 aa1.67□□□□□ -2.14
CLNS1A-208ENST00000527265 CTXND1A0A1B0GTU2 59 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 A0A1W2PPM0 123 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 KLKP1Q107X0 134 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 Q6ZQY7 126 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 VMO1Q7Z5L0 202 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 ZCCHC13Q8WW36 166 aaKnown RBP1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 CCL19Q99731 98 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 HIGD1BQ9P298 99 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 ARL2-SNX15V9GYD0 113 aa1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 HRNRQ86YZ3 2850 aaPredicted RBP1.66□□□□□ -2.14
CLNS1A-208ENST00000527265 SRRM2Q9UQ35 2752 aaKnown RBP1.65□□□□□ -2.14
CLNS1A-208ENST00000527265 LYSTQ99698 3801 aa1.65□□□□□ -2.14
CLNS1A-208ENST00000527265 LYNX1G3V0Z9 82 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 APELAP0DMC3 54 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 LYNX1P0DP58 116 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 GCHFRP30047 84 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 TMEM170BQ5T4T1 132 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 Q86TA4 180 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 ST20Q9HBF5 79 aa1.65□□□□□ -2.15
CLNS1A-208ENST00000527265 HECTD4Q9Y4D8 3996 aa1.64□□□□□ -2.15
CLNS1A-208ENST00000527265 SPINK4O60575 86 aa1.64□□□□□ -2.15
CLNS1A-208ENST00000527265 CCL18P55774 89 aa1.64□□□□□ -2.15
CLNS1A-208ENST00000527265 PRCDQ00LT1 54 aa1.64□□□□□ -2.15
CLNS1A-208ENST00000527265 FAM223AQ8IWN6 122 aa1.64□□□□□ -2.15
CLNS1A-208ENST00000527265 TMEM14BQ9NUH8 114 aa1.64□□□□□ -2.15
CLNS1A-208ENST00000527265 RNF213Q63HN8 5207 aa1.63□□□□□ -2.15
CLNS1A-208ENST00000527265 TRBV25-1A0A075B6N4 114 aa1.63□□□□□ -2.15
CLNS1A-208ENST00000527265 IGLC2P0DOY2 106 aa1.63□□□□□ -2.15
CLNS1A-208ENST00000527265 IGLC3P0DOY3 106 aa1.63□□□□□ -2.15
CLNS1A-208ENST00000527265 EFNA4P52798 201 aa1.63□□□□□ -2.15
CLNS1A-208ENST00000527265 WT1-ASQ06250 92 aa1.63□□□□□ -2.15
CLNS1A-208ENST00000527265 Q96NJ1 140 aa1.63□□□□□ -2.15
CLNS1A-208ENST00000527265 CSMD3Q7Z407 3707 aa1.62□□□□□ -2.15
CLNS1A-208ENST00000527265 LCE6AA0A183 80 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms