RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 PRUNE2Q8WUY3 3088 aa7.79□□□□□ -1.16
FGFR1-227ENST00000526570 CENPEQ02224 2701 aa7.79□□□□□ -1.16
FGFR1-227ENST00000526570 ITPR3Q14573 2671 aa7.78□□□□□ -1.16
FGFR1-227ENST00000526570 A0A087WTM6 91 aa7.78□□□□□ -1.16
FGFR1-227ENST00000526570 ZNF292O60281 2723 aa7.78□□□□□ -1.16
FGFR1-227ENST00000526570 DNAH14Q0VDD8 3507 aa7.76□□□□□ -1.17
FGFR1-227ENST00000526570 UNC80Q8N2C7 3258 aa7.76□□□□□ -1.17
FGFR1-227ENST00000526570 IGLV5-37A0A075B6J1 123 aa7.75□□□□□ -1.17
FGFR1-227ENST00000526570 CDH23Q9H251 3354 aa7.75□□□□□ -1.17
FGFR1-227ENST00000526570 CASC10Q5T4H9 136 aa7.74□□□□□ -1.17
FGFR1-227ENST00000526570 MMP24-AS1A0A0U1RRL7 71 aa7.74□□□□□ -1.17
FGFR1-227ENST00000526570 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
FGFR1-227ENST00000526570 SPATA8Q6RVD6 105 aa7.74□□□□□ -1.17
FGFR1-227ENST00000526570 CFAP46Q8IYW2 2715 aa7.73□□□□□ -1.17
FGFR1-227ENST00000526570 CR1P17927 2039 aa7.73□□□□□ -1.17
FGFR1-227ENST00000526570 J3QL48 77 aa7.72□□□□□ -1.17
FGFR1-227ENST00000526570 Q8NDZ9 215 aa7.72□□□□□ -1.17
FGFR1-227ENST00000526570 A8MU10 97 aa7.72□□□□□ -1.17
FGFR1-227ENST00000526570 SMR3BP02814 79 aaPredicted RBP7.72□□□□□ -1.17
FGFR1-227ENST00000526570 MGAQ8IWI9 3026 aa7.72□□□□□ -1.17
FGFR1-227ENST00000526570 AKAP13Q12802 2813 aa7.7□□□□□ -1.18
FGFR1-227ENST00000526570 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
FGFR1-227ENST00000526570 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
FGFR1-227ENST00000526570 ZNF861PO60384 105 aa7.67□□□□□ -1.18
FGFR1-227ENST00000526570 A0A087X002 238 aa7.63□□□□□ -1.19
FGFR1-227ENST00000526570 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
FGFR1-227ENST00000526570 WDFY4Q6ZS81 3184 aa7.61□□□□□ -1.19
FGFR1-227ENST00000526570 CFAP54Q96N23 3096 aa7.61□□□□□ -1.19
FGFR1-227ENST00000526570 TNP2Q05952 138 aa7.61□□□□□ -1.19
FGFR1-227ENST00000526570 ANAPC11Q9NYG5 84 aa7.61□□□□□ -1.19
FGFR1-227ENST00000526570 XIRP2A4UGR9 3374 aa7.6□□□□□ -1.19
FGFR1-227ENST00000526570 PSORS1C2Q9UIG4 136 aa7.6□□□□□ -1.19
FGFR1-227ENST00000526570 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
FGFR1-227ENST00000526570 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
FGFR1-227ENST00000526570 SZT2Q5T011 3432 aa7.59□□□□□ -1.19
FGFR1-227ENST00000526570 Q5W150 140 aa7.58□□□□□ -1.2
FGFR1-227ENST00000526570 Q6ZR54 194 aa7.57□□□□□ -1.2
FGFR1-227ENST00000526570 DSPP15924 2871 aaKnown RBP7.55□□□□□ -1.2
FGFR1-227ENST00000526570 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
FGFR1-227ENST00000526570 LCE6AA0A183 80 aa7.54□□□□□ -1.2
FGFR1-227ENST00000526570 IGSF10Q6WRI0 2623 aa7.54□□□□□ -1.2
FGFR1-227ENST00000526570 TRIOO75962 3097 aa7.53□□□□□ -1.2
FGFR1-227ENST00000526570 CHD6Q8TD26 2715 aa7.52□□□□□ -1.21
FGFR1-227ENST00000526570 FLG2Q5D862 2391 aaPredicted RBP7.52□□□□□ -1.21
FGFR1-227ENST00000526570 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
FGFR1-227ENST00000526570 TEP1Q99973 2627 aaKnown RBP7.51□□□□□ -1.21
FGFR1-227ENST00000526570 STAB1Q9NY15 2570 aa7.5□□□□□ -1.21
FGFR1-227ENST00000526570 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
FGFR1-227ENST00000526570 KRTAP29-1A8MX34 341 aaPredicted RBP7.48□□□□□ -1.21
FGFR1-227ENST00000526570 SPRR1AP35321 89 aa7.48□□□□□ -1.21
FGFR1-227ENST00000526570 VCANP13611 3396 aa7.47□□□□□ -1.21
FGFR1-227ENST00000526570 TEX15Q9BXT5 2789 aa7.47□□□□□ -1.21
FGFR1-227ENST00000526570 A8MUU9 505 aa7.46□□□□□ -1.22
FGFR1-227ENST00000526570 LAMA1P25391 3075 aa7.46□□□□□ -1.22
FGFR1-227ENST00000526570 SPTBN5Q9NRC6 3674 aaKnown RBP7.45□□□□□ -1.22
FGFR1-227ENST00000526570 SETXQ7Z333 2677 aaKnown RBP7.45□□□□□ -1.22
FGFR1-227ENST00000526570 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
FGFR1-227ENST00000526570 SPRR1BP22528 89 aa7.44□□□□□ -1.22
FGFR1-227ENST00000526570 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
FGFR1-227ENST00000526570 SPEGQ15772 3267 aa7.43□□□□□ -1.22
FGFR1-227ENST00000526570 MAP1AP78559 2803 aaPredicted RBP7.43□□□□□ -1.22
FGFR1-227ENST00000526570 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
FGFR1-227ENST00000526570 UNC79Q9P2D8 2635 aa7.42□□□□□ -1.22
FGFR1-227ENST00000526570 BAHCC1Q9P281 2608 aa7.41□□□□□ -1.22
FGFR1-227ENST00000526570 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
FGFR1-227ENST00000526570 PANO1I0J062 215 aa7.4□□□□□ -1.22
FGFR1-227ENST00000526570 VPS13AQ96RL7 3174 aa7.4□□□□□ -1.23
FGFR1-227ENST00000526570 REV3LO60673 3130 aa7.4□□□□□ -1.23
FGFR1-227ENST00000526570 S4R3F8 94 aa7.39□□□□□ -1.23
FGFR1-227ENST00000526570 COL6A5A8TX70 2615 aa7.39□□□□□ -1.23
FGFR1-227ENST00000526570 KRTAP1-5Q9BYS1 174 aa7.38□□□□□ -1.23
FGFR1-227ENST00000526570 MYO15AQ9UKN7 3530 aa7.38□□□□□ -1.23
FGFR1-227ENST00000526570 USP34Q70CQ2 3546 aa7.37□□□□□ -1.23
FGFR1-227ENST00000526570 NOTCH1P46531 2555 aa7.36□□□□□ -1.23
FGFR1-227ENST00000526570 COL6A3P12111 3177 aa7.35□□□□□ -1.23
FGFR1-227ENST00000526570 PLAC8Q9NZF1 115 aa7.35□□□□□ -1.23
FGFR1-227ENST00000526570 R4GN34 69 aa7.35□□□□□ -1.23
FGFR1-227ENST00000526570 EYSQ5T1H1 3165 aa7.34□□□□□ -1.23
FGFR1-227ENST00000526570 GCN1Q92616 2671 aaKnown RBP7.34□□□□□ -1.23
FGFR1-227ENST00000526570 CELSR3Q9NYQ7 3312 aa7.33□□□□□ -1.24
FGFR1-227ENST00000526570 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
FGFR1-227ENST00000526570 KRTAP11-1Q8IUC1 163 aa7.32□□□□□ -1.24
FGFR1-227ENST00000526570 UBR5O95071 2799 aaPredicted RBP7.26□□□□□ -1.25
FGFR1-227ENST00000526570 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
FGFR1-227ENST00000526570 KRTAP4-16G5E9R7 235 aaPredicted RBP7.25□□□□□ -1.25
FGFR1-227ENST00000526570 KRTAP10-1P60331 282 aa7.25□□□□□ -1.25
FGFR1-227ENST00000526570 FRYQ5TBA9 3013 aa7.24□□□□□ -1.25
FGFR1-227ENST00000526570 NBEAL2Q6ZNJ1 2754 aa7.23□□□□□ -1.25
FGFR1-227ENST00000526570 Q5VSD8 79 aa7.22□□□□□ -1.25
FGFR1-227ENST00000526570 M0QZ58 72 aa7.21□□□□□ -1.25
FGFR1-227ENST00000526570 ATMQ13315 3056 aa7.21□□□□□ -1.26
FGFR1-227ENST00000526570 FRYLO94915 3013 aa7.2□□□□□ -1.26
FGFR1-227ENST00000526570 FREM2Q5SZK8 3169 aa7.2□□□□□ -1.26
FGFR1-227ENST00000526570 Q6ZSA8 131 aa7.2□□□□□ -1.26
FGFR1-227ENST00000526570 DMXL2Q8TDJ6 3036 aa7.19□□□□□ -1.26
FGFR1-227ENST00000526570 DMBT1Q9UGM3 2413 aaPredicted RBP7.19□□□□□ -1.26
FGFR1-227ENST00000526570 NOTCH2NLQ7Z3S9 236 aa7.18□□□□□ -1.26
FGFR1-227ENST00000526570 FLNCQ14315 2725 aa7.17□□□□□ -1.26
FGFR1-227ENST00000526570 BOD1L1Q8NFC6 3051 aa7.16□□□□□ -1.26
FGFR1-227ENST00000526570 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms