RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.22
USH1C-203ENST00000526181 C14orf144Q96I85 54 aa7.4□□□□□ -1.22
USH1C-203ENST00000526181 UQCR10Q9UDW1 63 aa7.39□□□□□ -1.23
USH1C-203ENST00000526181 DLEU1O43261 78 aa7.38□□□□□ -1.23
USH1C-203ENST00000526181 SEC61BP60468 96 aaKnown RBP7.38□□□□□ -1.23
USH1C-203ENST00000526181 Q6ZQY7 126 aa7.38□□□□□ -1.23
USH1C-203ENST00000526181 hADV29S1A0JD25 119 aa7.37□□□□□ -1.23
USH1C-203ENST00000526181 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
USH1C-203ENST00000526181 C2orf91Q6ZV80 131 aa7.36□□□□□ -1.23
USH1C-203ENST00000526181 CFC1BP0CG36 223 aa7.34□□□□□ -1.23
USH1C-203ENST00000526181 CFC1P0CG37 223 aa7.34□□□□□ -1.23
USH1C-203ENST00000526181 C1orf195Q5TG92 126 aa7.34□□□□□ -1.23
USH1C-203ENST00000526181 Q5XG85 94 aa7.34□□□□□ -1.23
USH1C-203ENST00000526181 F8WEM9 126 aa7.33□□□□□ -1.24
USH1C-203ENST00000526181 BVES-AS1Q5T3Y7 98 aa7.33□□□□□ -1.24
USH1C-203ENST00000526181 HIGD1BQ9P298 99 aa7.32□□□□□ -1.24
USH1C-203ENST00000526181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.31□□□□□ -1.24
USH1C-203ENST00000526181 RAB37Q96AX2 223 aa7.31□□□□□ -1.24
USH1C-203ENST00000526181 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
USH1C-203ENST00000526181 IGLV8-61A0A075B6I0 122 aa7.29□□□□□ -1.24
USH1C-203ENST00000526181 A0A0B4J2C4 111 aa7.29□□□□□ -1.24
USH1C-203ENST00000526181 OCIAD2Q56VL3 154 aa7.28□□□□□ -1.24
USH1C-203ENST00000526181 PCOTHQ58A44 107 aa7.28□□□□□ -1.24
USH1C-203ENST00000526181 CLEC2BQ92478 149 aa7.28□□□□□ -1.24
USH1C-203ENST00000526181 FAM218AQ96MZ4 157 aa7.28□□□□□ -1.24
USH1C-203ENST00000526181 TCL1BO95988 128 aa7.27□□□□□ -1.25
USH1C-203ENST00000526181 Q6JHZ5 121 aa7.27□□□□□ -1.25
USH1C-203ENST00000526181 CEND1Q8N111 149 aa7.27□□□□□ -1.25
USH1C-203ENST00000526181 SNHG12Q9BXW3 62 aa7.27□□□□□ -1.25
USH1C-203ENST00000526181 TRBV7-7A0A0K0K1E9 115 aa7.26□□□□□ -1.25
USH1C-203ENST00000526181 H3BUT2 72 aa7.26□□□□□ -1.25
USH1C-203ENST00000526181 HSD52Q0P140 79 aa7.25□□□□□ -1.25
USH1C-203ENST00000526181 PPDPFLQ8WWR9 84 aa7.25□□□□□ -1.25
USH1C-203ENST00000526181 M0R143 59 aa7.24□□□□□ -1.25
USH1C-203ENST00000526181 FXYD2P54710 66 aa7.24□□□□□ -1.25
USH1C-203ENST00000526181 H0YGX0 51 aa7.23□□□□□ -1.25
USH1C-203ENST00000526181 PRO1854Q9UHT4 67 aa7.22□□□□□ -1.25
USH1C-203ENST00000526181 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
USH1C-203ENST00000526181 A6NJY4 79 aa7.21□□□□□ -1.26
USH1C-203ENST00000526181 BATFQ16520 125 aa7.21□□□□□ -1.26
USH1C-203ENST00000526181 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
USH1C-203ENST00000526181 RPL37P61927 97 aaKnown RBP7.2□□□□□ -1.26
USH1C-203ENST00000526181 LCE2CQ5TA81 110 aa7.2□□□□□ -1.26
USH1C-203ENST00000526181 K7ERJ3 54 aa7.19□□□□□ -1.26
USH1C-203ENST00000526181 TRIAP1O43715 76 aa7.19□□□□□ -1.26
USH1C-203ENST00000526181 NDUFV3P56181 108 aaKnown RBP7.19□□□□□ -1.26
USH1C-203ENST00000526181 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
USH1C-203ENST00000526181 SNCGO76070 127 aa7.18□□□□□ -1.26
USH1C-203ENST00000526181 FABP2P12104 132 aa7.16□□□□□ -1.26
USH1C-203ENST00000526181 A0A1B0GX51 115 aa7.15□□□□□ -1.26
USH1C-203ENST00000526181 COL5A1-AS1Q5SY13 56 aa7.15□□□□□ -1.26
USH1C-203ENST00000526181 H3BMG7 143 aa7.14□□□□□ -1.27
USH1C-203ENST00000526181 LST1O00453 97 aa7.14□□□□□ -1.27
USH1C-203ENST00000526181 Q6Q795 121 aa7.14□□□□□ -1.27
USH1C-203ENST00000526181 OBSCN-AS1Q96MR7 158 aa7.14□□□□□ -1.27
USH1C-203ENST00000526181 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
USH1C-203ENST00000526181 A0A087WSZ3 146 aa7.12□□□□□ -1.27
USH1C-203ENST00000526181 TAX1BP3O14907 124 aa7.12□□□□□ -1.27
USH1C-203ENST00000526181 PSMB2P49721 201 aa7.12□□□□□ -1.27
USH1C-203ENST00000526181 A0A1B0GV72 72 aa7.11□□□□□ -1.27
USH1C-203ENST00000526181 SS18L2Q9UHA2 77 aa7.11□□□□□ -1.27
USH1C-203ENST00000526181 MT1HP80294 61 aa7.1□□□□□ -1.27
USH1C-203ENST00000526181 A0A1B0GV90 55 aa7.09□□□□□ -1.27
USH1C-203ENST00000526181 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
USH1C-203ENST00000526181 GHRHP01286 108 aa7.09□□□□□ -1.27
USH1C-203ENST00000526181 DNAL4O96015 105 aa7.08□□□□□ -1.28
USH1C-203ENST00000526181 Q96NJ1 140 aa7.08□□□□□ -1.28
USH1C-203ENST00000526181 ORMDL1Q9P0S3 153 aa7.08□□□□□ -1.28
USH1C-203ENST00000526181 COX6CP09669 75 aa7.06□□□□□ -1.28
USH1C-203ENST00000526181 Q75L30 129 aa7.06□□□□□ -1.28
USH1C-203ENST00000526181 C9orf118A6NHY6 69 aa7.05□□□□□ -1.28
USH1C-203ENST00000526181 ANKRD29Q8N6D5 301 aa7.05□□□□□ -1.28
USH1C-203ENST00000526181 ATP11AUNQ6ZP68 121 aa7.04□□□□□ -1.28
USH1C-203ENST00000526181 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
USH1C-203ENST00000526181 TMEM256-PLSCR3K7ERE1 68 aa7.02□□□□□ -1.29
USH1C-203ENST00000526181 DSCR10P59022 87 aa7.02□□□□□ -1.29
USH1C-203ENST00000526181 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
USH1C-203ENST00000526181 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
USH1C-203ENST00000526181 H3BQ85 93 aa7.01□□□□□ -1.29
USH1C-203ENST00000526181 SIGMAR1Q99720 223 aa7.01□□□□□ -1.29
USH1C-203ENST00000526181 TRACP01848 142 aa7□□□□□ -1.29
USH1C-203ENST00000526181 COX6B2Q6YFQ2 88 aa7□□□□□ -1.29
USH1C-203ENST00000526181 C20orf166-AS1Q96NR2 134 aa7□□□□□ -1.29
USH1C-203ENST00000526181 CCKP06307 115 aa6.99□□□□□ -1.29
USH1C-203ENST00000526181 SCGB1C2P0DMR2 95 aa6.99□□□□□ -1.29
USH1C-203ENST00000526181 UBE2V1Q13404 147 aa6.99□□□□□ -1.29
USH1C-203ENST00000526181 A8MUU9 505 aa6.98□□□□□ -1.29
USH1C-203ENST00000526181 DEFB116Q30KQ4 102 aa6.98□□□□□ -1.29
USH1C-203ENST00000526181 IGKV4-1P06312 121 aa6.97□□□□□ -1.29
USH1C-203ENST00000526181 K7EP34 96 aa6.96□□□□□ -1.3
USH1C-203ENST00000526181 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
USH1C-203ENST00000526181 LORP23490 312 aaPredicted RBP6.95□□□□□ -1.3
USH1C-203ENST00000526181 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
USH1C-203ENST00000526181 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
USH1C-203ENST00000526181 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
USH1C-203ENST00000526181 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
USH1C-203ENST00000526181 M0R2T5 61 aa6.94□□□□□ -1.3
USH1C-203ENST00000526181 NOTCH2NLQ7Z3S9 236 aa6.94□□□□□ -1.3
USH1C-203ENST00000526181 SPCS1Q9Y6A9 102 aa6.94□□□□□ -1.3
USH1C-203ENST00000526181 LINC00313P59037 77 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms