RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
CCS-204ENST00000526066 LINC01547P58512 204 aaPredicted RBP10.22□□□□□ -0.77
CCS-204ENST00000526066 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
CCS-204ENST00000526066 TCL1BO95988 128 aa10.21□□□□□ -0.77
CCS-204ENST00000526066 DNAL4O96015 105 aa10.21□□□□□ -0.77
CCS-204ENST00000526066 FABP2P12104 132 aa10.21□□□□□ -0.77
CCS-204ENST00000526066 ATXN8Q156A1 80 aa10.21□□□□□ -0.77
CCS-204ENST00000526066 PPDPFLQ8WWR9 84 aa10.21□□□□□ -0.77
CCS-204ENST00000526066 GHRHP01286 108 aa10.2□□□□□ -0.78
CCS-204ENST00000526066 PRR26Q8N8Z3 221 aa10.2□□□□□ -0.78
CCS-204ENST00000526066 ANAPC11Q9NYG5 84 aa10.2□□□□□ -0.78
CCS-204ENST00000526066 CRYGAP11844 174 aa10.19□□□□□ -0.78
CCS-204ENST00000526066 Q8N377 158 aa10.19□□□□□ -0.78
CCS-204ENST00000526066 DEFB105AQ8NG35 78 aa10.19□□□□□ -0.78
CCS-204ENST00000526066 KRTAP9-2Q9BYQ4 174 aa10.18□□□□□ -0.78
CCS-204ENST00000526066 A0A087X002 238 aa10.17□□□□□ -0.78
CCS-204ENST00000526066 H3BQ85 93 aa10.17□□□□□ -0.78
CCS-204ENST00000526066 ORMDL1Q9P0S3 153 aa10.16□□□□□ -0.78
CCS-204ENST00000526066 PRR4Q16378 134 aa10.15□□□□□ -0.78
CCS-204ENST00000526066 LAMTOR3Q9UHA4 124 aa10.15□□□□□ -0.78
CCS-204ENST00000526066 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
CCS-204ENST00000526066 SPCS1Q9Y6A9 102 aa10.14□□□□□ -0.79
CCS-204ENST00000526066 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
CCS-204ENST00000526066 LPAP08519 4548 aa10.12□□□□□ -0.79
CCS-204ENST00000526066 TMEM256-PLSCR3K7ERE1 68 aa10.11□□□□□ -0.79
CCS-204ENST00000526066 C3orf22Q8N5N4 141 aa10.1□□□□□ -0.79
CCS-204ENST00000526066 TYMSOSQ8TAI1 123 aa10.09□□□□□ -0.79
CCS-204ENST00000526066 IGLV9-49A0A0B4J1Y8 123 aa10.08□□□□□ -0.8
CCS-204ENST00000526066 H3BMG7 143 aa10.08□□□□□ -0.8
CCS-204ENST00000526066 K7EP34 96 aa10.08□□□□□ -0.8
CCS-204ENST00000526066 BAALC-AS2P0C853 105 aa10.08□□□□□ -0.8
CCS-204ENST00000526066 SSBP3-AS1Q7Z2R9 100 aa10.08□□□□□ -0.8
CCS-204ENST00000526066 C9JAW5 83 aa10.07□□□□□ -0.8
CCS-204ENST00000526066 F8WEM9 126 aa10.07□□□□□ -0.8
CCS-204ENST00000526066 NDUFV3P56181 108 aaKnown RBP10.07□□□□□ -0.8
CCS-204ENST00000526066 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
CCS-204ENST00000526066 MOBPQ13875 183 aa10.07□□□□□ -0.8
CCS-204ENST00000526066 Q8NBF4 154 aa10.07□□□□□ -0.8
CCS-204ENST00000526066 C9orf153Q5TBE3 101 aa10.06□□□□□ -0.8
CCS-204ENST00000526066 GTF2H5Q6ZYL4 71 aa10.06□□□□□ -0.8
CCS-204ENST00000526066 IGLV8-61A0A075B6I0 122 aa10.05□□□□□ -0.8
CCS-204ENST00000526066 KRTAP9-6A0A140TA67 174 aa10.03□□□□□ -0.8
CCS-204ENST00000526066 H3BT86 120 aa10.03□□□□□ -0.8
CCS-204ENST00000526066 Q6JHZ5 121 aa10.01□□□□□ -0.81
CCS-204ENST00000526066 ANKRD29Q8N6D5 301 aa10.01□□□□□ -0.81
CCS-204ENST00000526066 MUC2Q02817 5179 aa10.01□□□□□ -0.81
CCS-204ENST00000526066 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
CCS-204ENST00000526066 SPAG11AQ6PDA7 123 aa9.97□□□□□ -0.81
CCS-204ENST00000526066 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
CCS-204ENST00000526066 PRO0461Q9UI25 63 aa9.97□□□□□ -0.81
CCS-204ENST00000526066 JMJD7-PLA2G4BH0Y9G9 81 aa9.95□□□□□ -0.82
CCS-204ENST00000526066 SMCPP49901 116 aaPredicted RBP9.95□□□□□ -0.82
CCS-204ENST00000526066 CD164Q04900 197 aa9.95□□□□□ -0.82
CCS-204ENST00000526066 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
CCS-204ENST00000526066 IGFL1Q6UW32 110 aa9.95□□□□□ -0.82
CCS-204ENST00000526066 A0A1B0GV90 55 aa9.94□□□□□ -0.82
CCS-204ENST00000526066 RBM3P98179 157 aaKnown RBP9.94□□□□□ -0.82
CCS-204ENST00000526066 SPINK1P00995 79 aa9.93□□□□□ -0.82
CCS-204ENST00000526066 F8W1H4 67 aa9.92□□□□□ -0.82
CCS-204ENST00000526066 OBSCN-AS1Q96MR7 158 aa9.92□□□□□ -0.82
CCS-204ENST00000526066 A0A0G2JQZ4 141 aa9.91□□□□□ -0.82
CCS-204ENST00000526066 TRBV7-4A0A0J9YYF1 115 aa9.91□□□□□ -0.82
CCS-204ENST00000526066 A0A1B0GV72 72 aa9.9□□□□□ -0.82
CCS-204ENST00000526066 RPS29P62273 56 aaKnown RBP9.9□□□□□ -0.82
CCS-204ENST00000526066 DSCR8Q96T75 97 aa9.9□□□□□ -0.82
CCS-204ENST00000526066 Q6Q795 121 aa9.89□□□□□ -0.83
CCS-204ENST00000526066 LCE2AQ5TA79 106 aaPredicted RBP9.88□□□□□ -0.83
CCS-204ENST00000526066 TEN1Q86WV5 123 aa9.87□□□□□ -0.83
CCS-204ENST00000526066 FAT4Q6V0I7 4981 aa9.87□□□□□ -0.83
CCS-204ENST00000526066 LOC110117498A0A087WWA1 95 aa9.86□□□□□ -0.83
CCS-204ENST00000526066 PDE6GP18545 87 aa9.86□□□□□ -0.83
CCS-204ENST00000526066 HRCT1Q6UXD1 115 aa9.85□□□□□ -0.83
CCS-204ENST00000526066 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
CCS-204ENST00000526066 A0A1W2PNM2 257 aa9.84□□□□□ -0.83
CCS-204ENST00000526066 C21orf62-AS1Q17RA5 79 aa9.84□□□□□ -0.83
CCS-204ENST00000526066 Q5XG85 94 aa9.84□□□□□ -0.83
CCS-204ENST00000526066 C14orf132Q9NPU4 83 aa9.84□□□□□ -0.83
CCS-204ENST00000526066 CCKP06307 115 aa9.83□□□□□ -0.84
CCS-204ENST00000526066 Q6ZQT0 140 aa9.83□□□□□ -0.84
CCS-204ENST00000526066 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
CCS-204ENST00000526066 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
CCS-204ENST00000526066 A0A1B0GW54 56 aa9.78□□□□□ -0.84
CCS-204ENST00000526066 ETDBQ3ZM63 59 aa9.78□□□□□ -0.84
CCS-204ENST00000526066 RETNLBQ9BQ08 111 aa9.78□□□□□ -0.84
CCS-204ENST00000526066 A0A087WSZ3 146 aa9.76□□□□□ -0.85
CCS-204ENST00000526066 ASB16-AS1Q495Z4 193 aa9.76□□□□□ -0.85
CCS-204ENST00000526066 VPS25Q9BRG1 176 aa9.76□□□□□ -0.85
CCS-204ENST00000526066 SS18L2Q9UHA2 77 aa9.76□□□□□ -0.85
CCS-204ENST00000526066 TPRXLQ17RH7 258 aa9.75□□□□□ -0.85
CCS-204ENST00000526066 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
CCS-204ENST00000526066 C1orf195Q5TG92 126 aa9.69□□□□□ -0.86
CCS-204ENST00000526066 FP248Q71RG6 208 aaPredicted RBP9.69□□□□□ -0.86
CCS-204ENST00000526066 Q96NJ1 140 aa9.63□□□□□ -0.87
CCS-204ENST00000526066 LINC00472Q9H8W2 130 aa9.62□□□□□ -0.87
CCS-204ENST00000526066 NREPQ16612 68 aa9.58□□□□□ -0.88
CCS-204ENST00000526066 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
CCS-204ENST00000526066 ACYP1P07311 99 aa9.56□□□□□ -0.88
CCS-204ENST00000526066 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
CCS-204ENST00000526066 LINC00846Q9NV44 126 aa9.56□□□□□ -0.88
CCS-204ENST00000526066 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms