RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TRAV13-2A0A0B4J235 113 aa12.41□□□□□ -0.42
USP47-205ENST00000525257 KRTDAPP60985 99 aa12.4□□□□□ -0.42
USP47-205ENST00000525257 Q75L30 129 aa12.4□□□□□ -0.42
USP47-205ENST00000525257 TRBV7-7A0A0K0K1E9 115 aa12.39□□□□□ -0.43
USP47-205ENST00000525257 KRTAP9-7A8MTY7 169 aa12.39□□□□□ -0.43
USP47-205ENST00000525257 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.39□□□□□ -0.43
USP47-205ENST00000525257 USH2AO75445 5202 aa12.39□□□□□ -0.43
USP47-205ENST00000525257 CLEC2BQ92478 149 aa12.38□□□□□ -0.43
USP47-205ENST00000525257 SSPOA2VEC9 5147 aa12.37□□□□□ -0.43
USP47-205ENST00000525257 Q6JHZ5 121 aa12.37□□□□□ -0.43
USP47-205ENST00000525257 IGFL1Q6UW32 110 aa12.37□□□□□ -0.43
USP47-205ENST00000525257 SLC7A5P1Q8MH63 180 aa12.36□□□□□ -0.43
USP47-205ENST00000525257 Q6ZQY7 126 aa12.35□□□□□ -0.43
USP47-205ENST00000525257 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
USP47-205ENST00000525257 VAMP3Q15836 100 aa12.34□□□□□ -0.43
USP47-205ENST00000525257 LINC00575Q6W349 94 aa12.34□□□□□ -0.43
USP47-205ENST00000525257 C20orf202A1L168 122 aa12.32□□□□□ -0.44
USP47-205ENST00000525257 CFC1P0CG37 223 aa12.32□□□□□ -0.44
USP47-205ENST00000525257 hADV29S1A0JD25 119 aa12.3□□□□□ -0.44
USP47-205ENST00000525257 OCIAD2Q56VL3 154 aa12.3□□□□□ -0.44
USP47-205ENST00000525257 KRTAP9-8Q9BYQ0 159 aa12.3□□□□□ -0.44
USP47-205ENST00000525257 Q96NJ1 140 aa12.29□□□□□ -0.44
USP47-205ENST00000525257 LST1O00453 97 aa12.25□□□□□ -0.45
USP47-205ENST00000525257 COA6Q5JTJ3 125 aaKnown RBP12.22□□□□□ -0.45
USP47-205ENST00000525257 H3BUT2 72 aa12.2□□□□□ -0.46
USP47-205ENST00000525257 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.19□□□□□ -0.46
USP47-205ENST00000525257 C20orf166-AS1Q96NR2 134 aa12.19□□□□□ -0.46
USP47-205ENST00000525257 TRBV20-1A0A075B6N2 111 aa12.18□□□□□ -0.46
USP47-205ENST00000525257 SNHG12Q9BXW3 62 aa12.18□□□□□ -0.46
USP47-205ENST00000525257 A8MUU9 505 aa12.16□□□□□ -0.46
USP47-205ENST00000525257 PPDPFLQ8WWR9 84 aa12.15□□□□□ -0.46
USP47-205ENST00000525257 FCGBPQ9Y6R7 5405 aaPredicted RBP12.14□□□□□ -0.47
USP47-205ENST00000525257 SS18L2Q9UHA2 77 aa12.13□□□□□ -0.47
USP47-205ENST00000525257 SCGB1D1O95968 90 aa12.12□□□□□ -0.47
USP47-205ENST00000525257 SNRPEP62304 92 aaKnown RBP12.12□□□□□ -0.47
USP47-205ENST00000525257 MT2AP02795 61 aa12.1□□□□□ -0.47
USP47-205ENST00000525257 BVES-AS1Q5T3Y7 98 aa12.1□□□□□ -0.47
USP47-205ENST00000525257 C12orf57Q99622 126 aa12.1□□□□□ -0.47
USP47-205ENST00000525257 DSCR10P59022 87 aa12.05□□□□□ -0.48
USP47-205ENST00000525257 FAM236DA0A1B0GTK5 79 aa12.04□□□□□ -0.48
USP47-205ENST00000525257 FAM236CP0DP71 79 aa12.04□□□□□ -0.48
USP47-205ENST00000525257 A0A087WSZ3 146 aa12.03□□□□□ -0.48
USP47-205ENST00000525257 TEN1Q86WV5 123 aa12.03□□□□□ -0.48
USP47-205ENST00000525257 KRTAP19-1Q8IUB9 90 aa12.02□□□□□ -0.49
USP47-205ENST00000525257 HSBP1L1C9JCN9 74 aa12.01□□□□□ -0.49
USP47-205ENST00000525257 LCE2BO14633 110 aa12.01□□□□□ -0.49
USP47-205ENST00000525257 MT1FP04733 61 aa12.01□□□□□ -0.49
USP47-205ENST00000525257 KRTAP16-1A8MUX0 517 aa11.99□□□□□ -0.49
USP47-205ENST00000525257 NDUFV3P56181 108 aaKnown RBP11.97□□□□□ -0.49
USP47-205ENST00000525257 HIST1H4GQ99525 98 aa11.97□□□□□ -0.49
USP47-205ENST00000525257 SIGMAR1Q99720 223 aa11.96□□□□□ -0.49
USP47-205ENST00000525257 KRTAP10-10P60014 251 aa11.93□□□□□ -0.5
USP47-205ENST00000525257 KRTAP9-3Q9BYQ3 159 aa11.93□□□□□ -0.5
USP47-205ENST00000525257 SNCGO76070 127 aa11.91□□□□□ -0.5
USP47-205ENST00000525257 FAM218AQ96MZ4 157 aa11.91□□□□□ -0.5
USP47-205ENST00000525257 H3BMG7 143 aa11.9□□□□□ -0.5
USP47-205ENST00000525257 HIST1H2BLQ99880 126 aa11.9□□□□□ -0.5
USP47-205ENST00000525257 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
USP47-205ENST00000525257 HRES1P13985 223 aa11.89□□□□□ -0.51
USP47-205ENST00000525257 LINC00313P59037 77 aa11.89□□□□□ -0.51
USP47-205ENST00000525257 HIST3H2BBQ8N257 126 aa11.89□□□□□ -0.51
USP47-205ENST00000525257 MPLKIPQ8TAP9 179 aa11.89□□□□□ -0.51
USP47-205ENST00000525257 S100A2P29034 98 aa11.87□□□□□ -0.51
USP47-205ENST00000525257 H0YGX0 51 aa11.86□□□□□ -0.51
USP47-205ENST00000525257 RAB37Q96AX2 223 aa11.86□□□□□ -0.51
USP47-205ENST00000525257 A0A1W2PNM2 257 aa11.85□□□□□ -0.51
USP47-205ENST00000525257 FABP2P12104 132 aa11.84□□□□□ -0.51
USP47-205ENST00000525257 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
USP47-205ENST00000525257 MACF1Q9UPN3 7388 aaKnown RBP11.83□□□□□ -0.52
USP47-205ENST00000525257 NOTCH2NLQ7Z3S9 236 aa11.81□□□□□ -0.52
USP47-205ENST00000525257 COX8AP10176 69 aa11.8□□□□□ -0.52
USP47-205ENST00000525257 SYNE2Q8WXH0 6885 aaKnown RBP11.79□□□□□ -0.52
USP47-205ENST00000525257 A0A0B4J2C4 111 aa11.77□□□□□ -0.53
USP47-205ENST00000525257 GHRHP01286 108 aa11.77□□□□□ -0.53
USP47-205ENST00000525257 DEFB116Q30KQ4 102 aa11.75□□□□□ -0.53
USP47-205ENST00000525257 A0A1B0GX51 115 aa11.74□□□□□ -0.53
USP47-205ENST00000525257 A0A1B0GV72 72 aa11.73□□□□□ -0.53
USP47-205ENST00000525257 DLEU1O43261 78 aa11.73□□□□□ -0.53
USP47-205ENST00000525257 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
USP47-205ENST00000525257 TRBV7-4A0A0J9YYF1 115 aa11.71□□□□□ -0.53
USP47-205ENST00000525257 ANKRD29Q8N6D5 301 aa11.71□□□□□ -0.53
USP47-205ENST00000525257 C14orf144Q96I85 54 aa11.69□□□□□ -0.54
USP47-205ENST00000525257 LINC00472Q9H8W2 130 aa11.68□□□□□ -0.54
USP47-205ENST00000525257 LINC00846Q9NV44 126 aa11.68□□□□□ -0.54
USP47-205ENST00000525257 MTURNQ8N3F0 131 aa11.67□□□□□ -0.54
USP47-205ENST00000525257 HIGD1BQ9P298 99 aa11.66□□□□□ -0.54
USP47-205ENST00000525257 S100A6P06703 90 aa11.65□□□□□ -0.54
USP47-205ENST00000525257 KRTAP19-6Q3LI70 58 aa11.65□□□□□ -0.54
USP47-205ENST00000525257 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
USP47-205ENST00000525257 TRIAP1O43715 76 aa11.63□□□□□ -0.55
USP47-205ENST00000525257 C2orf91Q6ZV80 131 aa11.62□□□□□ -0.55
USP47-205ENST00000525257 TRACP01848 142 aa11.61□□□□□ -0.55
USP47-205ENST00000525257 DNAL4O96015 105 aa11.6□□□□□ -0.55
USP47-205ENST00000525257 CCKP06307 115 aa11.6□□□□□ -0.55
USP47-205ENST00000525257 CEND1Q8N111 149 aa11.6□□□□□ -0.55
USP47-205ENST00000525257 ORMDL1Q9P0S3 153 aa11.6□□□□□ -0.55
USP47-205ENST00000525257 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
USP47-205ENST00000525257 C8orf87E5RJ46 101 aa11.57□□□□□ -0.56
USP47-205ENST00000525257 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
USP47-205ENST00000525257 ZCCHC13Q8WW36 166 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms