RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 PCNX1Q96RV3 2341 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 STAB2Q8WWQ8 2551 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 DDX60LQ5H9U9 1706 aaKnown RBP0.21□□□□□ -2.38
COPB1-203ENST00000525214 CEP290O15078 2479 aa0.21□□□□□ -2.38
COPB1-203ENST00000525214 EIF2AK4Q9P2K8 1649 aaKnown RBP0.2□□□□□ -2.38
COPB1-203ENST00000525214 LYSTQ99698 3801 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 DIP2AQ14689 1571 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 THOC2Q8NI27 1593 aaKnown RBP0.2□□□□□ -2.38
COPB1-203ENST00000525214 LMTK2Q8IWU2 1503 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 M0R2T5 61 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 MRPL33O75394 65 aaKnown RBP0.2□□□□□ -2.38
COPB1-203ENST00000525214 LINC00158P58513 81 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 ATXN8Q156A1 80 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 SPG11Q96JI7 2443 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 C4AP0C0L4 1744 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 C4BP0C0L5 1744 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 RALGAPBQ86X10 1494 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 HFM1A2PYH4 1435 aa0.2□□□□□ -2.38
COPB1-203ENST00000525214 TJP1Q07157 1748 aa0.19□□□□□ -2.38
COPB1-203ENST00000525214 NF1P21359 2839 aa0.19□□□□□ -2.38
COPB1-203ENST00000525214 HIVEP1P15822 2718 aa0.19□□□□□ -2.38
COPB1-203ENST00000525214 HSPG2P98160 4391 aa0.19□□□□□ -2.38
COPB1-203ENST00000525214 CDC42BPGQ6DT37 1551 aa0.19□□□□□ -2.38
COPB1-203ENST00000525214 DNMBPQ6XZF7 1577 aa0.19□□□□□ -2.38
COPB1-203ENST00000525214 ITSN1Q15811 1721 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 TNRC18O15417 2968 aaPredicted RBP0.18□□□□□ -2.38
COPB1-203ENST00000525214 ACACAQ13085 2346 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 DEPDC5O75140 1603 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 CICQ96RK0 1608 aaPredicted RBP0.18□□□□□ -2.38
COPB1-203ENST00000525214 DEFB131BA0A096LNP1 70 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 SPRR2DP22532 72 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 UBL5Q9BZL1 73 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 SSPOA2VEC9 5147 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 PARP4Q9UKK3 1724 aaKnown RBP0.18□□□□□ -2.38
COPB1-203ENST00000525214 ASXL1Q8IXJ9 1541 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 WIZO95785 1651 aa0.18□□□□□ -2.38
COPB1-203ENST00000525214 ZC3H13Q5T200 1668 aaKnown RBP0.18□□□□□ -2.38
COPB1-203ENST00000525214 MAP1AP78559 2803 aaPredicted RBP0.17□□□□□ -2.38
COPB1-203ENST00000525214 PLXNC1O60486 1568 aa0.17□□□□□ -2.38
COPB1-203ENST00000525214 CRIP1P50238 77 aa0.17□□□□□ -2.38
COPB1-203ENST00000525214 DEFB135Q30KP9 77 aa0.17□□□□□ -2.38
COPB1-203ENST00000525214 RIF1Q5UIP0 2472 aaKnown RBP0.17□□□□□ -2.38
COPB1-203ENST00000525214 TEP1Q99973 2627 aaKnown RBP0.17□□□□□ -2.38
COPB1-203ENST00000525214 KCNQ1DNQ9H478 68 aa0.17□□□□□ -2.38
COPB1-203ENST00000525214 LRRK2Q5S007 2527 aa0.17□□□□□ -2.38
COPB1-203ENST00000525214 ABCA9Q8IUA7 1624 aa0.16□□□□□ -2.38
COPB1-203ENST00000525214 NRAPQ86VF7 1730 aa0.16□□□□□ -2.38
COPB1-203ENST00000525214 ZANQ9Y493 2812 aa0.16□□□□□ -2.38
COPB1-203ENST00000525214 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
COPB1-203ENST00000525214 H0YAA0 97 aa0.16□□□□□ -2.38
COPB1-203ENST00000525214 ZZEF1O43149 2961 aa0.16□□□□□ -2.38
COPB1-203ENST00000525214 SONP18583 2426 aaKnown RBP0.16□□□□□ -2.38
COPB1-203ENST00000525214 MADDQ8WXG6 1647 aa0.16□□□□□ -2.38
COPB1-203ENST00000525214 ADAMTS12P58397 1594 aa0.15□□□□□ -2.38
COPB1-203ENST00000525214 UBR4Q5T4S7 5183 aa0.15□□□□□ -2.38
COPB1-203ENST00000525214 NHSQ6T4R5 1651 aa0.15□□□□□ -2.39
COPB1-203ENST00000525214 PCLOQ9Y6V0 5065 aa0.15□□□□□ -2.39
COPB1-203ENST00000525214 ETDCA0A1B0GVM5 59 aa0.15□□□□□ -2.39
COPB1-203ENST00000525214 SMIM31A0A1B0GVY4 71 aa0.15□□□□□ -2.39
COPB1-203ENST00000525214 LRP2P98164 4655 aa0.14□□□□□ -2.39
COPB1-203ENST00000525214 CCDC168Q8NDH2 2452 aa0.14□□□□□ -2.39
COPB1-203ENST00000525214 LINC01549A6NIU2 74 aa0.14□□□□□ -2.39
COPB1-203ENST00000525214 LYNX1G3V0Z9 82 aa0.14□□□□□ -2.39
COPB1-203ENST00000525214 ITPR3Q14573 2671 aa0.14□□□□□ -2.39
COPB1-203ENST00000525214 TGP01266 2768 aa0.14□□□□□ -2.39
COPB1-203ENST00000525214 FASNP49327 2511 aaKnown RBP0.14□□□□□ -2.39
COPB1-203ENST00000525214 EFCAB5A4FU69 1503 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 USP9XQ93008 2570 aaPredicted RBP0.13□□□□□ -2.39
COPB1-203ENST00000525214 MROH1Q8NDA8 1641 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 RNF17Q9BXT8 1623 aaKnown RBP0.13□□□□□ -2.39
COPB1-203ENST00000525214 KMT2CQ8NEZ4 4911 aaKnown RBP0.13□□□□□ -2.39
COPB1-203ENST00000525214 A0A087WWC5 75 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 H0YGG7 62 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 DEFB130BP0DP73 79 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 DEFB130AP0DP74 79 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 DEFB114Q30KQ6 69 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 KIAA1109Q2LD37 5005 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 MGAM2Q2M2H8 2515 aa0.13□□□□□ -2.39
COPB1-203ENST00000525214 FAM186AA6NE01 2351 aa0.12□□□□□ -2.39
COPB1-203ENST00000525214 DNAH9Q9NYC9 4486 aa0.12□□□□□ -2.39
COPB1-203ENST00000525214 PDZD2O15018 2839 aa0.12□□□□□ -2.39
COPB1-203ENST00000525214 INO80Q9ULG1 1556 aaPredicted RBP0.12□□□□□ -2.39
COPB1-203ENST00000525214 MTORP42345 2549 aa0.12□□□□□ -2.39
COPB1-203ENST00000525214 IAPPP10997 89 aa0.12□□□□□ -2.39
COPB1-203ENST00000525214 SPRR2BP35325 72 aa0.12□□□□□ -2.39
COPB1-203ENST00000525214 PKD1P98161 4303 aa0.11□□□□□ -2.39
COPB1-203ENST00000525214 GCN1Q92616 2671 aaKnown RBP0.11□□□□□ -2.39
COPB1-203ENST00000525214 MYO18BQ8IUG5 2567 aa0.11□□□□□ -2.39
COPB1-203ENST00000525214 MXRA5Q9NR99 2828 aa0.11□□□□□ -2.39
COPB1-203ENST00000525214 COL12A1Q99715 3063 aa0.11□□□□□ -2.39
COPB1-203ENST00000525214 FLGP20930 4061 aaPredicted RBP0.11□□□□□ -2.39
COPB1-203ENST00000525214 SRRM2Q9UQ35 2752 aaKnown RBP0.11□□□□□ -2.39
COPB1-203ENST00000525214 COL6A5A8TX70 2615 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 DMXL1Q9Y485 3027 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 UTP20O75691 2785 aaKnown RBP0.1□□□□□ -2.39
COPB1-203ENST00000525214 KIAA0586Q9BVV6 1533 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 PKHD1P08F94 4074 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 KRTAP20-1Q3LI63 56 aa0.1□□□□□ -2.39
COPB1-203ENST00000525214 S100ZQ8WXG8 99 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms