RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TRIAP1O43715 76 aa6.61□□□□□ -1.35
TRAPPC4-204ENST00000524797 A0A087X002 238 aa6.6□□□□□ -1.35
TRAPPC4-204ENST00000524797 ACYP1P07311 99 aa6.6□□□□□ -1.35
TRAPPC4-204ENST00000524797 CRYGAP11844 174 aa6.6□□□□□ -1.35
TRAPPC4-204ENST00000524797 C4orf26Q17RF5 130 aa6.6□□□□□ -1.35
TRAPPC4-204ENST00000524797 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
TRAPPC4-204ENST00000524797 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
TRAPPC4-204ENST00000524797 M0R378 163 aa6.6□□□□□ -1.35
TRAPPC4-204ENST00000524797 A0A0J9YXY3 114 aa6.59□□□□□ -1.35
TRAPPC4-204ENST00000524797 PRLHP81277 87 aa6.59□□□□□ -1.35
TRAPPC4-204ENST00000524797 C1orf195Q5TG92 126 aa6.59□□□□□ -1.35
TRAPPC4-204ENST00000524797 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
TRAPPC4-204ENST00000524797 ANAPC11Q9NYG5 84 aa6.58□□□□□ -1.36
TRAPPC4-204ENST00000524797 FAM229BQ4G0N7 80 aa6.58□□□□□ -1.36
TRAPPC4-204ENST00000524797 MIR7-3HGQ8N6C7 128 aa6.58□□□□□ -1.36
TRAPPC4-204ENST00000524797 TYMSOSQ8TAI1 123 aa6.58□□□□□ -1.36
TRAPPC4-204ENST00000524797 FAM236AA0A1B0GUQ0 79 aa6.57□□□□□ -1.36
TRAPPC4-204ENST00000524797 FAM236BA0A1B0GV22 79 aa6.57□□□□□ -1.36
TRAPPC4-204ENST00000524797 LST1O00453 97 aa6.57□□□□□ -1.36
TRAPPC4-204ENST00000524797 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
TRAPPC4-204ENST00000524797 NCR3O14931 201 aa6.56□□□□□ -1.36
TRAPPC4-204ENST00000524797 PRYO14603 147 aa6.55□□□□□ -1.36
TRAPPC4-204ENST00000524797 COX7CP15954 63 aa6.55□□□□□ -1.36
TRAPPC4-204ENST00000524797 TRACP01848 142 aa6.54□□□□□ -1.36
TRAPPC4-204ENST00000524797 PRR4Q16378 134 aa6.54□□□□□ -1.36
TRAPPC4-204ENST00000524797 LINC00643Q86TS7 51 aa6.54□□□□□ -1.36
TRAPPC4-204ENST00000524797 LITAFQ99732 161 aa6.54□□□□□ -1.36
TRAPPC4-204ENST00000524797 CLEC2BQ92478 149 aa6.54□□□□□ -1.36
TRAPPC4-204ENST00000524797 TIMM17BO60830 172 aa6.52□□□□□ -1.37
TRAPPC4-204ENST00000524797 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
TRAPPC4-204ENST00000524797 SPRR1AP35321 89 aa6.52□□□□□ -1.37
TRAPPC4-204ENST00000524797 DAND5Q8N907 189 aa6.52□□□□□ -1.37
TRAPPC4-204ENST00000524797 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
TRAPPC4-204ENST00000524797 LPAP08519 4548 aa6.52□□□□□ -1.37
TRAPPC4-204ENST00000524797 LINC00337Q8N6G1 96 aa6.51□□□□□ -1.37
TRAPPC4-204ENST00000524797 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 FAM236DA0A1B0GTK5 79 aa6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 FAM236CP0DP71 79 aa6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 ADAMTSL4-AS1Q5T5F5 129 aa6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 SPRR4Q96PI1 79 aa6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 COPS9Q8WXC6 57 aa6.5□□□□□ -1.37
TRAPPC4-204ENST00000524797 ETDCA0A1B0GVM5 59 aa6.49□□□□□ -1.37
TRAPPC4-204ENST00000524797 RNF213Q63HN8 5207 aa6.49□□□□□ -1.37
TRAPPC4-204ENST00000524797 NPC2P61916 151 aa6.48□□□□□ -1.37
TRAPPC4-204ENST00000524797 ZNF706Q9Y5V0 76 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC4-204ENST00000524797 ATOX1O00244 68 aa6.48□□□□□ -1.37
TRAPPC4-204ENST00000524797 NDUFC2O95298 119 aa6.48□□□□□ -1.37
TRAPPC4-204ENST00000524797 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
TRAPPC4-204ENST00000524797 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.37
TRAPPC4-204ENST00000524797 CD164Q04900 197 aa6.45□□□□□ -1.38
TRAPPC4-204ENST00000524797 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
TRAPPC4-204ENST00000524797 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
TRAPPC4-204ENST00000524797 IGLV6-57P01721 117 aa6.44□□□□□ -1.38
TRAPPC4-204ENST00000524797 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
TRAPPC4-204ENST00000524797 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
TRAPPC4-204ENST00000524797 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
TRAPPC4-204ENST00000524797 HIST1H4AP62805 103 aaKnown RBP6.43□□□□□ -1.38
TRAPPC4-204ENST00000524797 LINC00483Q53H64 154 aa6.43□□□□□ -1.38
TRAPPC4-204ENST00000524797 S100A7L2Q5SY68 101 aa6.43□□□□□ -1.38
TRAPPC4-204ENST00000524797 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
TRAPPC4-204ENST00000524797 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
TRAPPC4-204ENST00000524797 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
TRAPPC4-204ENST00000524797 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
TRAPPC4-204ENST00000524797 TRAV23DV6A0A075B6W5 121 aa6.42□□□□□ -1.38
TRAPPC4-204ENST00000524797 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
TRAPPC4-204ENST00000524797 Q6ZRX8 168 aa6.42□□□□□ -1.38
TRAPPC4-204ENST00000524797 Q9BRP9 147 aa6.42□□□□□ -1.38
TRAPPC4-204ENST00000524797 SERP1Q9Y6X1 66 aa6.42□□□□□ -1.38
TRAPPC4-204ENST00000524797 Q8NBF4 154 aa6.4□□□□□ -1.38
TRAPPC4-204ENST00000524797 DNAL4O96015 105 aa6.4□□□□□ -1.39
TRAPPC4-204ENST00000524797 PMAIP1Q13794 54 aa6.4□□□□□ -1.39
TRAPPC4-204ENST00000524797 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC4-204ENST00000524797 SMIM26A0A096LP01 95 aa6.39□□□□□ -1.39
TRAPPC4-204ENST00000524797 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
TRAPPC4-204ENST00000524797 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC4-204ENST00000524797 Q6JHZ5 121 aa6.38□□□□□ -1.39
TRAPPC4-204ENST00000524797 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
TRAPPC4-204ENST00000524797 TRAV13-2A0A0B4J235 113 aa6.38□□□□□ -1.39
TRAPPC4-204ENST00000524797 MOBPQ13875 183 aa6.37□□□□□ -1.39
TRAPPC4-204ENST00000524797 TPRXLQ17RH7 258 aa6.37□□□□□ -1.39
TRAPPC4-204ENST00000524797 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
TRAPPC4-204ENST00000524797 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
TRAPPC4-204ENST00000524797 LAMTOR3Q9UHA4 124 aa6.36□□□□□ -1.39
TRAPPC4-204ENST00000524797 SSBP3-AS1Q7Z2R9 100 aa6.35□□□□□ -1.39
TRAPPC4-204ENST00000524797 H0YGX0 51 aa6.34□□□□□ -1.39
TRAPPC4-204ENST00000524797 SPINK1P00995 79 aa6.34□□□□□ -1.39
TRAPPC4-204ENST00000524797 FP248Q71RG6 208 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC4-204ENST00000524797 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.39
TRAPPC4-204ENST00000524797 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.39
TRAPPC4-204ENST00000524797 MUC17Q685J3 4493 aa6.34□□□□□ -1.4
TRAPPC4-204ENST00000524797 IGKV3D-7A0A0C4DH55 119 aa6.33□□□□□ -1.4
TRAPPC4-204ENST00000524797 A0A0U1RQV1 116 aa6.33□□□□□ -1.4
TRAPPC4-204ENST00000524797 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
TRAPPC4-204ENST00000524797 OBSCN-AS1Q96MR7 158 aa6.33□□□□□ -1.4
TRAPPC4-204ENST00000524797 C14orf132Q9NPU4 83 aa6.33□□□□□ -1.4
TRAPPC4-204ENST00000524797 LINC00846Q9NV44 126 aa6.32□□□□□ -1.4
TRAPPC4-204ENST00000524797 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
TRAPPC4-204ENST00000524797 DHRS4-AS1Q9P1J3 65 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms