RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
CAPN1-202ENST00000524773 A0A087WSZ3 146 aa8.36□□□□□ -1.07
CAPN1-202ENST00000524773 LINC00588Q9Y4M8 146 aa8.35□□□□□ -1.07
CAPN1-202ENST00000524773 C1orf195Q5TG92 126 aa8.35□□□□□ -1.07
CAPN1-202ENST00000524773 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
CAPN1-202ENST00000524773 HCG22E2RYF7 251 aa8.34□□□□□ -1.07
CAPN1-202ENST00000524773 SPRR4Q96PI1 79 aa8.34□□□□□ -1.08
CAPN1-202ENST00000524773 SPRR1AP35321 89 aa8.33□□□□□ -1.08
CAPN1-202ENST00000524773 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
CAPN1-202ENST00000524773 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
CAPN1-202ENST00000524773 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
CAPN1-202ENST00000524773 REG3GQ6UW15 175 aa8.32□□□□□ -1.08
CAPN1-202ENST00000524773 LINC00208Q96KT6 92 aa8.32□□□□□ -1.08
CAPN1-202ENST00000524773 DNAH9Q9NYC9 4486 aa8.32□□□□□ -1.08
CAPN1-202ENST00000524773 LCE6AA0A183 80 aa8.31□□□□□ -1.08
CAPN1-202ENST00000524773 DNAH10OSP0CZ25 163 aa8.3□□□□□ -1.08
CAPN1-202ENST00000524773 STAB2Q8WWQ8 2551 aa8.3□□□□□ -1.08
CAPN1-202ENST00000524773 TRAV22A0A0B4J277 110 aa8.29□□□□□ -1.08
CAPN1-202ENST00000524773 A8MUN3 132 aa8.29□□□□□ -1.08
CAPN1-202ENST00000524773 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
CAPN1-202ENST00000524773 CHTF8P0CG12 524 aa8.28□□□□□ -1.08
CAPN1-202ENST00000524773 MGAM2Q2M2H8 2515 aa8.28□□□□□ -1.08
CAPN1-202ENST00000524773 IGLV5-37A0A075B6J1 123 aa8.28□□□□□ -1.08
CAPN1-202ENST00000524773 DNAH7Q8WXX0 4024 aa8.24□□□□□ -1.09
CAPN1-202ENST00000524773 HUWE1Q7Z6Z7 4374 aaKnown RBP8.24□□□□□ -1.09
CAPN1-202ENST00000524773 UBE2AP49459 152 aa8.23□□□□□ -1.09
CAPN1-202ENST00000524773 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
CAPN1-202ENST00000524773 KRTAP1-5Q9BYS1 174 aa8.23□□□□□ -1.09
CAPN1-202ENST00000524773 SEC61GP60059 68 aa8.22□□□□□ -1.09
CAPN1-202ENST00000524773 Q1T7F1 81 aa8.22□□□□□ -1.09
CAPN1-202ENST00000524773 H0Y9P7 68 aa8.21□□□□□ -1.09
CAPN1-202ENST00000524773 MP68P56378 58 aa8.21□□□□□ -1.09
CAPN1-202ENST00000524773 V9GYY9 64 aa8.21□□□□□ -1.09
CAPN1-202ENST00000524773 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
CAPN1-202ENST00000524773 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
CAPN1-202ENST00000524773 B9D2Q9BPU9 175 aa8.19□□□□□ -1.1
CAPN1-202ENST00000524773 H0Y9J4 135 aa8.19□□□□□ -1.1
CAPN1-202ENST00000524773 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
CAPN1-202ENST00000524773 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
CAPN1-202ENST00000524773 DNAH3Q8TD57 4116 aa8.17□□□□□ -1.1
CAPN1-202ENST00000524773 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
CAPN1-202ENST00000524773 MDFIQ99750 246 aa8.15□□□□□ -1.1
CAPN1-202ENST00000524773 K7EIL1 84 aa8.15□□□□□ -1.11
CAPN1-202ENST00000524773 Q5VV11 94 aa8.15□□□□□ -1.11
CAPN1-202ENST00000524773 PRR15Q8IV56 129 aa8.15□□□□□ -1.11
CAPN1-202ENST00000524773 CHKB-CPT1BH3BT56 60 aa8.14□□□□□ -1.11
CAPN1-202ENST00000524773 PRR15LQ9BU68 103 aa8.13□□□□□ -1.11
CAPN1-202ENST00000524773 FRAS1Q86XX4 4008 aa8.12□□□□□ -1.11
CAPN1-202ENST00000524773 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
CAPN1-202ENST00000524773 PANO1I0J062 215 aa8.12□□□□□ -1.11
CAPN1-202ENST00000524773 IGLV9-49A0A0B4J1Y8 123 aa8.11□□□□□ -1.11
CAPN1-202ENST00000524773 NDUFB1O75438 58 aa8.11□□□□□ -1.11
CAPN1-202ENST00000524773 SPTSSBQ8NFR3 76 aa8.11□□□□□ -1.11
CAPN1-202ENST00000524773 PMAIP1Q13794 54 aa8.11□□□□□ -1.11
CAPN1-202ENST00000524773 Q8N9P0 234 aaPredicted RBP8.1□□□□□ -1.11
CAPN1-202ENST00000524773 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
CAPN1-202ENST00000524773 A8MWP4 228 aa8.09□□□□□ -1.11
CAPN1-202ENST00000524773 IGLV8-61A0A075B6I0 122 aa8.07□□□□□ -1.12
CAPN1-202ENST00000524773 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
CAPN1-202ENST00000524773 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
CAPN1-202ENST00000524773 COA5Q86WW8 74 aa8.06□□□□□ -1.12
CAPN1-202ENST00000524773 NDUFS5O43920 106 aa8.05□□□□□ -1.12
CAPN1-202ENST00000524773 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
CAPN1-202ENST00000524773 UBE2DNLQ8IWF7 75 aa8.04□□□□□ -1.12
CAPN1-202ENST00000524773 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
CAPN1-202ENST00000524773 PLECQ15149 4684 aaKnown RBP8.04□□□□□ -1.12
CAPN1-202ENST00000524773 CD164Q04900 197 aa8.03□□□□□ -1.12
CAPN1-202ENST00000524773 LCA10Q71F78 164 aa8.02□□□□□ -1.13
CAPN1-202ENST00000524773 IGHV6-1A0A0B4J1U7 121 aa8.01□□□□□ -1.13
CAPN1-202ENST00000524773 A6NED7 52 aa8.01□□□□□ -1.13
CAPN1-202ENST00000524773 A0A087X002 238 aa8.01□□□□□ -1.13
CAPN1-202ENST00000524773 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
CAPN1-202ENST00000524773 SPANXA2-OT1Q8N9U9 137 aa7.99□□□□□ -1.13
CAPN1-202ENST00000524773 C14orf177Q52M58 125 aa7.98□□□□□ -1.13
CAPN1-202ENST00000524773 J3QL48 77 aa7.98□□□□□ -1.13
CAPN1-202ENST00000524773 MOBPQ13875 183 aa7.98□□□□□ -1.13
CAPN1-202ENST00000524773 Q96NJ1 140 aa7.98□□□□□ -1.13
CAPN1-202ENST00000524773 SPRR1BP22528 89 aa7.97□□□□□ -1.13
CAPN1-202ENST00000524773 LIMD2Q9BT23 127 aa7.96□□□□□ -1.13
CAPN1-202ENST00000524773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.13
CAPN1-202ENST00000524773 H3BPC8 53 aa7.96□□□□□ -1.14
CAPN1-202ENST00000524773 DNAH8Q96JB1 4490 aa7.95□□□□□ -1.14
CAPN1-202ENST00000524773 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
CAPN1-202ENST00000524773 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
CAPN1-202ENST00000524773 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
CAPN1-202ENST00000524773 TGP01266 2768 aa7.92□□□□□ -1.14
CAPN1-202ENST00000524773 SPINK7P58062 85 aa7.91□□□□□ -1.14
CAPN1-202ENST00000524773 HRES1P13985 223 aa7.9□□□□□ -1.15
CAPN1-202ENST00000524773 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
CAPN1-202ENST00000524773 PRR26Q8N8Z3 221 aa7.89□□□□□ -1.15
CAPN1-202ENST00000524773 KMT2AQ03164 3969 aa7.89□□□□□ -1.15
CAPN1-202ENST00000524773 Q75L30 129 aa7.89□□□□□ -1.15
CAPN1-202ENST00000524773 RETNLBQ9BQ08 111 aa7.88□□□□□ -1.15
CAPN1-202ENST00000524773 APLNQ9ULZ1 77 aa7.88□□□□□ -1.15
CAPN1-202ENST00000524773 HECTD4Q9Y4D8 3996 aa7.88□□□□□ -1.15
CAPN1-202ENST00000524773 LOC101927531A0A1B0GV80 90 aa7.86□□□□□ -1.15
CAPN1-202ENST00000524773 STARD9Q9P2P6 4700 aa7.86□□□□□ -1.15
CAPN1-202ENST00000524773 DNAH17Q9UFH2 4485 aa7.86□□□□□ -1.15
CAPN1-202ENST00000524773 Q5W150 140 aa7.86□□□□□ -1.15
CAPN1-202ENST00000524773 A0A1B0GVX0 72 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms