RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 DNAH12Q6ZR08 3092 aa3.96□□□□□ -1.78
LIN7C-202ENST00000524596 CHD7Q9P2D1 2997 aa3.96□□□□□ -1.78
LIN7C-202ENST00000524596 LRRK2Q5S007 2527 aa3.96□□□□□ -1.78
LIN7C-202ENST00000524596 NCOR2Q9Y618 2525 aa3.96□□□□□ -1.78
LIN7C-202ENST00000524596 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
LIN7C-202ENST00000524596 CHD8Q9HCK8 2581 aa3.95□□□□□ -1.78
LIN7C-202ENST00000524596 GIG44P09565 113 aaPredicted RBP3.95□□□□□ -1.78
LIN7C-202ENST00000524596 NOTCH2Q04721 2471 aa3.95□□□□□ -1.78
LIN7C-202ENST00000524596 REV3LO60673 3130 aa3.94□□□□□ -1.78
LIN7C-202ENST00000524596 POLQO75417 2590 aa3.93□□□□□ -1.78
LIN7C-202ENST00000524596 J3QKU1 62 aa3.93□□□□□ -1.78
LIN7C-202ENST00000524596 SPRR1AP35321 89 aa3.93□□□□□ -1.78
LIN7C-202ENST00000524596 KRTAP24-1Q3LI83 254 aa3.93□□□□□ -1.78
LIN7C-202ENST00000524596 Q6ZSA8 131 aa3.92□□□□□ -1.78
LIN7C-202ENST00000524596 CDH23Q9H251 3354 aa3.92□□□□□ -1.78
LIN7C-202ENST00000524596 H0YAA0 97 aa3.92□□□□□ -1.78
LIN7C-202ENST00000524596 INE1O15225 51 aa3.92□□□□□ -1.78
LIN7C-202ENST00000524596 COL4A2P08572 1712 aa3.92□□□□□ -1.78
LIN7C-202ENST00000524596 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
LIN7C-202ENST00000524596 DEFB135Q30KP9 77 aa3.91□□□□□ -1.78
LIN7C-202ENST00000524596 ASH1LQ9NR48 2969 aaKnown RBP3.91□□□□□ -1.78
LIN7C-202ENST00000524596 DEFB4AO15263 64 aa3.9□□□□□ -1.78
LIN7C-202ENST00000524596 KRTAP21-3Q3LHN1 58 aa3.9□□□□□ -1.78
LIN7C-202ENST00000524596 HIVEP3Q5T1R4 2406 aa3.9□□□□□ -1.79
LIN7C-202ENST00000524596 CCDC168Q8NDH2 2452 aa3.89□□□□□ -1.79
LIN7C-202ENST00000524596 CFAP54Q96N23 3096 aa3.89□□□□□ -1.79
LIN7C-202ENST00000524596 USP34Q70CQ2 3546 aa3.89□□□□□ -1.79
LIN7C-202ENST00000524596 SPRR1BP22528 89 aa3.89□□□□□ -1.79
LIN7C-202ENST00000524596 DCHS1Q96JQ0 3298 aa3.89□□□□□ -1.79
LIN7C-202ENST00000524596 PTPN13Q12923 2485 aa3.88□□□□□ -1.79
LIN7C-202ENST00000524596 FASNP49327 2511 aaKnown RBP3.88□□□□□ -1.79
LIN7C-202ENST00000524596 MYO9AB2RTY4 2548 aa3.88□□□□□ -1.79
LIN7C-202ENST00000524596 K7EIL1 84 aa3.87□□□□□ -1.79
LIN7C-202ENST00000524596 ZFHX4Q86UP3 3567 aa3.86□□□□□ -1.79
LIN7C-202ENST00000524596 SETXQ7Z333 2677 aaKnown RBP3.86□□□□□ -1.79
LIN7C-202ENST00000524596 TLN1Q9Y490 2541 aaKnown RBP3.85□□□□□ -1.79
LIN7C-202ENST00000524596 GCN1Q92616 2671 aaKnown RBP3.85□□□□□ -1.79
LIN7C-202ENST00000524596 LINC01556Q5JQF7 62 aa3.84□□□□□ -1.79
LIN7C-202ENST00000524596 XIRP2A4UGR9 3374 aa3.84□□□□□ -1.8
LIN7C-202ENST00000524596 TPRXLQ17RH7 258 aa3.84□□□□□ -1.8
LIN7C-202ENST00000524596 MYO18BQ8IUG5 2567 aa3.84□□□□□ -1.8
LIN7C-202ENST00000524596 MAST4O15021 2626 aa3.83□□□□□ -1.8
LIN7C-202ENST00000524596 ACANP16112 2415 aa3.82□□□□□ -1.8
LIN7C-202ENST00000524596 SPACA4Q8TDM5 124 aa3.82□□□□□ -1.8
LIN7C-202ENST00000524596 DOPEY1Q5JWR5 2465 aa3.82□□□□□ -1.8
LIN7C-202ENST00000524596 ANKRD11Q6UB99 2663 aaPredicted RBP3.82□□□□□ -1.8
LIN7C-202ENST00000524596 WDFY4Q6ZS81 3184 aa3.81□□□□□ -1.8
LIN7C-202ENST00000524596 DMXL1Q9Y485 3027 aa3.81□□□□□ -1.8
LIN7C-202ENST00000524596 C5orf42Q9H799 3197 aa3.8□□□□□ -1.8
LIN7C-202ENST00000524596 H3BNG1 76 aa3.78□□□□□ -1.8
LIN7C-202ENST00000524596 S4R3F8 94 aa3.78□□□□□ -1.8
LIN7C-202ENST00000524596 TLN2Q9Y4G6 2542 aa3.78□□□□□ -1.8
LIN7C-202ENST00000524596 FLNBO75369 2602 aaKnown RBP3.78□□□□□ -1.8
LIN7C-202ENST00000524596 HELZ2Q9BYK8 2649 aaKnown RBP3.77□□□□□ -1.81
LIN7C-202ENST00000524596 HECTD1Q9ULT8 2610 aa3.77□□□□□ -1.81
LIN7C-202ENST00000524596 U3KQA8 63 aa3.77□□□□□ -1.81
LIN7C-202ENST00000524596 ZFYVE26Q68DK2 2539 aa3.77□□□□□ -1.81
LIN7C-202ENST00000524596 IGSF10Q6WRI0 2623 aa3.76□□□□□ -1.81
LIN7C-202ENST00000524596 UNC79Q9P2D8 2635 aa3.76□□□□□ -1.81
LIN7C-202ENST00000524596 CFAP47Q6ZTR5 3102 aa3.76□□□□□ -1.81
LIN7C-202ENST00000524596 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
LIN7C-202ENST00000524596 CEP295Q9C0D2 2601 aa3.75□□□□□ -1.81
LIN7C-202ENST00000524596 TRIOO75962 3097 aa3.74□□□□□ -1.81
LIN7C-202ENST00000524596 WDR87Q6ZQQ6 2873 aa3.74□□□□□ -1.81
LIN7C-202ENST00000524596 ITPR1Q14643 2758 aa3.74□□□□□ -1.81
LIN7C-202ENST00000524596 DNAH14Q0VDD8 3507 aa3.72□□□□□ -1.81
LIN7C-202ENST00000524596 TENM4Q6N022 2769 aa3.71□□□□□ -1.81
LIN7C-202ENST00000524596 MYO15AQ9UKN7 3530 aa3.71□□□□□ -1.82
LIN7C-202ENST00000524596 BPTFQ12830 3046 aa3.7□□□□□ -1.82
LIN7C-202ENST00000524596 SPEGQ15772 3267 aa3.69□□□□□ -1.82
LIN7C-202ENST00000524596 AKAP13Q12802 2813 aa3.67□□□□□ -1.82
LIN7C-202ENST00000524596 M0QZ58 72 aa3.67□□□□□ -1.82
LIN7C-202ENST00000524596 ZZEF1O43149 2961 aa3.66□□□□□ -1.82
LIN7C-202ENST00000524596 UBR5O95071 2799 aaPredicted RBP3.66□□□□□ -1.82
LIN7C-202ENST00000524596 DMDP11532 3685 aa3.66□□□□□ -1.82
LIN7C-202ENST00000524596 USP9XQ93008 2570 aaPredicted RBP3.65□□□□□ -1.82
LIN7C-202ENST00000524596 MTORP42345 2549 aa3.65□□□□□ -1.82
LIN7C-202ENST00000524596 FRYQ5TBA9 3013 aa3.65□□□□□ -1.83
LIN7C-202ENST00000524596 NBEAQ8NFP9 2946 aa3.64□□□□□ -1.83
LIN7C-202ENST00000524596 VPS13AQ96RL7 3174 aa3.64□□□□□ -1.83
LIN7C-202ENST00000524596 DSPP15924 2871 aaKnown RBP3.63□□□□□ -1.83
LIN7C-202ENST00000524596 KRTAP10-8P60410 259 aa3.63□□□□□ -1.83
LIN7C-202ENST00000524596 CFAP46Q8IYW2 2715 aa3.62□□□□□ -1.83
LIN7C-202ENST00000524596 PIEZO2Q9H5I5 2752 aa3.61□□□□□ -1.83
LIN7C-202ENST00000524596 TEP1Q99973 2627 aaKnown RBP3.61□□□□□ -1.83
LIN7C-202ENST00000524596 FBN3Q75N90 2809 aa3.6□□□□□ -1.83
LIN7C-202ENST00000524596 FRYLO94915 3013 aa3.59□□□□□ -1.83
LIN7C-202ENST00000524596 FBN2P35556 2912 aa3.59□□□□□ -1.84
LIN7C-202ENST00000524596 DMXL2Q8TDJ6 3036 aa3.59□□□□□ -1.84
LIN7C-202ENST00000524596 TEX15Q9BXT5 2789 aa3.59□□□□□ -1.84
LIN7C-202ENST00000524596 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
LIN7C-202ENST00000524596 MAPK1IP1LQ8NDC0 245 aa3.56□□□□□ -1.84
LIN7C-202ENST00000524596 KALRNO60229 2985 aa3.54□□□□□ -1.84
LIN7C-202ENST00000524596 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
LIN7C-202ENST00000524596 ASPMQ8IZT6 3477 aa3.53□□□□□ -1.84
LIN7C-202ENST00000524596 XP32Q5T750 250 aa3.53□□□□□ -1.84
LIN7C-202ENST00000524596 C9orf92A6NGG3 77 aa3.52□□□□□ -1.85
LIN7C-202ENST00000524596 USP9YO00507 2555 aaPredicted RBP3.52□□□□□ -1.85
LIN7C-202ENST00000524596 SMG1Q96Q15 3661 aaKnown RBP3.51□□□□□ -1.85
LIN7C-202ENST00000524596 ZFHX3Q15911 3703 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms