RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 LINC00308Q8TCZ7 52 aa2.08□□□□□ -2.08
SKP1-211ENST00000523359 DNAH14Q0VDD8 3507 aa2.08□□□□□ -2.08
SKP1-211ENST00000523359 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
SKP1-211ENST00000523359 SPINK9Q5DT21 86 aa2.07□□□□□ -2.08
SKP1-211ENST00000523359 UNQ6190/PRO20217Q6UXQ8 127 aa2.07□□□□□ -2.08
SKP1-211ENST00000523359 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.07□□□□□ -2.08
SKP1-211ENST00000523359 CACNA1HO95180 2353 aa2.07□□□□□ -2.08
SKP1-211ENST00000523359 GVINP1Q7Z2Y8 2422 aa2.07□□□□□ -2.08
SKP1-211ENST00000523359 ASPMQ8IZT6 3477 aa2.06□□□□□ -2.08
SKP1-211ENST00000523359 POLR2KP53803 58 aaKnown RBP2.06□□□□□ -2.08
SKP1-211ENST00000523359 HAMPP81172 84 aa2.06□□□□□ -2.08
SKP1-211ENST00000523359 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
SKP1-211ENST00000523359 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
SKP1-211ENST00000523359 EP300Q09472 2414 aaPredicted RBP2.06□□□□□ -2.08
SKP1-211ENST00000523359 SPEGQ15772 3267 aa2.06□□□□□ -2.08
SKP1-211ENST00000523359 DMXL1Q9Y485 3027 aa2.05□□□□□ -2.08
SKP1-211ENST00000523359 LINC00959A0A1B0GUT2 108 aa2.05□□□□□ -2.08
SKP1-211ENST00000523359 G3V318 75 aa2.05□□□□□ -2.08
SKP1-211ENST00000523359 NCR3O14931 201 aa2.05□□□□□ -2.08
SKP1-211ENST00000523359 WFDC9Q8NEX5 89 aa2.05□□□□□ -2.08
SKP1-211ENST00000523359 FLNCQ14315 2725 aa2.05□□□□□ -2.08
SKP1-211ENST00000523359 FBN2P35556 2912 aa2.05□□□□□ -2.08
SKP1-211ENST00000523359 MYO15AQ9UKN7 3530 aa2.04□□□□□ -2.08
SKP1-211ENST00000523359 ATRQ13535 2644 aa2.04□□□□□ -2.08
SKP1-211ENST00000523359 IGSF10Q6WRI0 2623 aa2.04□□□□□ -2.08
SKP1-211ENST00000523359 TMEM167AQ8TBQ9 72 aa2.04□□□□□ -2.08
SKP1-211ENST00000523359 COX14Q96I36 57 aa2.04□□□□□ -2.08
SKP1-211ENST00000523359 UBR5O95071 2799 aaPredicted RBP2.04□□□□□ -2.08
SKP1-211ENST00000523359 FBN1P35555 2871 aaKnown RBP2.03□□□□□ -2.08
SKP1-211ENST00000523359 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
SKP1-211ENST00000523359 ETDCA0A1B0GVM5 59 aa2.03□□□□□ -2.08
SKP1-211ENST00000523359 PLAC4Q8WY50 150 aa2.03□□□□□ -2.08
SKP1-211ENST00000523359 OTOGLQ3ZCN5 2332 aa2.03□□□□□ -2.08
SKP1-211ENST00000523359 STAB1Q9NY15 2570 aa2.03□□□□□ -2.09
SKP1-211ENST00000523359 NDUFA4O00483 81 aa2.02□□□□□ -2.09
SKP1-211ENST00000523359 SMIM11BQ8TCY0 68 aa2.02□□□□□ -2.09
SKP1-211ENST00000523359 KCNQ1DNQ9H478 68 aa2.02□□□□□ -2.09
SKP1-211ENST00000523359 CADP27708 2225 aa2.02□□□□□ -2.09
SKP1-211ENST00000523359 PCNX1Q96RV3 2341 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 TEX15Q9BXT5 2789 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 ASXL3Q9C0F0 2248 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 FRYQ5TBA9 3013 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 H0YGG7 62 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 Q6ZRX8 168 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 GAFA1Q96PS6 74 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 VPS13AQ96RL7 3174 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 DOPEY2Q9Y3R5 2298 aa2.01□□□□□ -2.09
SKP1-211ENST00000523359 ASCC3Q8N3C0 2202 aaKnown RBP2.01□□□□□ -2.09
SKP1-211ENST00000523359 NBEAL1Q6ZS30 2694 aa2□□□□□ -2.09
SKP1-211ENST00000523359 COX7BP24311 80 aa2□□□□□ -2.09
SKP1-211ENST00000523359 KRTAP21-3Q3LHN1 58 aa2□□□□□ -2.09
SKP1-211ENST00000523359 LINC00575Q6W349 94 aa2□□□□□ -2.09
SKP1-211ENST00000523359 RPL39LQ96EH5 51 aaKnown RBP2□□□□□ -2.09
SKP1-211ENST00000523359 RYR1P21817 5038 aa2□□□□□ -2.09
SKP1-211ENST00000523359 CREBBPQ92793 2442 aa2□□□□□ -2.09
SKP1-211ENST00000523359 PIEZO2Q9H5I5 2752 aa1.99□□□□□ -2.09
SKP1-211ENST00000523359 IGF2RP11717 2491 aa1.99□□□□□ -2.09
SKP1-211ENST00000523359 LOC400499M0QZD8 3231 aa1.99□□□□□ -2.09
SKP1-211ENST00000523359 DMDP11532 3685 aa1.99□□□□□ -2.09
SKP1-211ENST00000523359 MRPL33O75394 65 aaKnown RBP1.99□□□□□ -2.09
SKP1-211ENST00000523359 RPL39P62891 51 aaKnown RBP1.99□□□□□ -2.09
SKP1-211ENST00000523359 DEFB103AP81534 67 aa1.99□□□□□ -2.09
SKP1-211ENST00000523359 WT1-ASQ06250 92 aa1.99□□□□□ -2.09
SKP1-211ENST00000523359 FLNAP21333 2647 aaKnown RBP1.99□□□□□ -2.09
SKP1-211ENST00000523359 A0A1B0GU69 56 aa1.98□□□□□ -2.09
SKP1-211ENST00000523359 STATHP02808 62 aa1.98□□□□□ -2.09
SKP1-211ENST00000523359 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
SKP1-211ENST00000523359 RPL39P5Q59GN2 51 aa1.98□□□□□ -2.09
SKP1-211ENST00000523359 TLN1Q9Y490 2541 aaKnown RBP1.98□□□□□ -2.09
SKP1-211ENST00000523359 RELNP78509 3460 aa1.98□□□□□ -2.09
SKP1-211ENST00000523359 SMG1Q96Q15 3661 aaKnown RBP1.98□□□□□ -2.09
SKP1-211ENST00000523359 GOLGA4Q13439 2230 aaKnown RBP1.98□□□□□ -2.09
SKP1-211ENST00000523359 PKD1L1Q8TDX9 2849 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 ZZEF1O43149 2961 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 DEFB108AA8MXU0 73 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 I3L2K1 104 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 RPL37P61927 97 aaKnown RBP1.97□□□□□ -2.09
SKP1-211ENST00000523359 SPINK13Q1W4C9 94 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 PCOTHQ58A44 107 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 CHD7Q9P2D1 2997 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 TRIOO75962 3097 aa1.97□□□□□ -2.09
SKP1-211ENST00000523359 PTPRQQ9UMZ3 2332 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 TENM4Q6N022 2769 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 SPTA1P02549 2419 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 J3QKU1 62 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 K7EIM0 57 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 M0QY20 66 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 LY6G6CO95867 125 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 LINC00158P58513 81 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 CDKN2A-AS1Q9UH64 79 aa1.96□□□□□ -2.1
SKP1-211ENST00000523359 BOD1L1Q8NFC6 3051 aa1.95□□□□□ -2.1
SKP1-211ENST00000523359 NBEAQ8NFP9 2946 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 CEP295Q9C0D2 2601 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 CHD9Q3L8U1 2897 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 DEFB131BA0A096LNP1 70 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 KRTAP12-1P59990 96 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 TNCP24821 2201 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 FREM2Q5SZK8 3169 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 BIRC6Q9NR09 4857 aa1.94□□□□□ -2.1
SKP1-211ENST00000523359 RYR3Q15413 4870 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms