RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 TPRXLQ17RH7 258 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 CARD19Q96LW7 228 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 CAMK2N2Q96S95 79 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 SND1-IT1Q9HBX3 110 aa3.83□□□□□ -1.8
SDCBP-210ENST00000522843 NHP2Q9NX24 153 aaKnown RBP3.83□□□□□ -1.8
SDCBP-210ENST00000522843 IGKV2-28A0A075B6P5 120 aa3.82□□□□□ -1.8
SDCBP-210ENST00000522843 TRAV13-2A0A0B4J235 113 aa3.82□□□□□ -1.8
SDCBP-210ENST00000522843 IGKV2D-28P01615 120 aa3.82□□□□□ -1.8
SDCBP-210ENST00000522843 PFN2P35080 140 aa3.82□□□□□ -1.8
SDCBP-210ENST00000522843 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
SDCBP-210ENST00000522843 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
SDCBP-210ENST00000522843 DAND5Q8N907 189 aa3.82□□□□□ -1.8
SDCBP-210ENST00000522843 A0A087X002 238 aa3.81□□□□□ -1.8
SDCBP-210ENST00000522843 RAB37Q96AX2 223 aa3.81□□□□□ -1.8
SDCBP-210ENST00000522843 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-210ENST00000522843 LOC107984640A0A0U1RRK4 108 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 A0A1B0GV90 55 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 A0A1W2PPM0 123 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 H3BUT2 72 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 K7ERJ3 54 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 RPL28P46779 137 aaKnown RBP3.8□□□□□ -1.8
SDCBP-210ENST00000522843 MT1HP80294 61 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 LINC00337Q8N6G1 96 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 PKIGQ9Y2B9 76 aa3.8□□□□□ -1.8
SDCBP-210ENST00000522843 TRBV20-1A0A075B6N2 111 aa3.79□□□□□ -1.8
SDCBP-210ENST00000522843 IGLV6-57P01721 117 aa3.79□□□□□ -1.8
SDCBP-210ENST00000522843 CRYGAP11844 174 aa3.79□□□□□ -1.8
SDCBP-210ENST00000522843 FABP2P12104 132 aa3.79□□□□□ -1.8
SDCBP-210ENST00000522843 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
SDCBP-210ENST00000522843 TMEM126AQ9H061 195 aa3.79□□□□□ -1.8
SDCBP-210ENST00000522843 M0R378 163 aa3.78□□□□□ -1.8
SDCBP-210ENST00000522843 NPC2P61916 151 aa3.78□□□□□ -1.8
SDCBP-210ENST00000522843 ASB16-AS1Q495Z4 193 aa3.78□□□□□ -1.8
SDCBP-210ENST00000522843 C9orf129Q5T035 196 aaKnown RBP3.78□□□□□ -1.8
SDCBP-210ENST00000522843 LYRM7Q5U5X0 104 aa3.78□□□□□ -1.8
SDCBP-210ENST00000522843 Q8NDZ9 215 aa3.78□□□□□ -1.8
SDCBP-210ENST00000522843 CBY1Q9Y3M2 126 aa3.78□□□□□ -1.8
SDCBP-210ENST00000522843 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
SDCBP-210ENST00000522843 TRBV7-6A0A0J9YX20 115 aa3.77□□□□□ -1.81
SDCBP-210ENST00000522843 H0YGX0 51 aa3.77□□□□□ -1.81
SDCBP-210ENST00000522843 K7EP34 96 aa3.77□□□□□ -1.81
SDCBP-210ENST00000522843 COX6CP09669 75 aa3.77□□□□□ -1.81
SDCBP-210ENST00000522843 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
SDCBP-210ENST00000522843 A0A1B0GX51 115 aa3.76□□□□□ -1.81
SDCBP-210ENST00000522843 M0QXV9 152 aa3.76□□□□□ -1.81
SDCBP-210ENST00000522843 VAMP3Q15836 100 aa3.76□□□□□ -1.81
SDCBP-210ENST00000522843 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
SDCBP-210ENST00000522843 SMIM11BQ8TCY0 68 aa3.76□□□□□ -1.81
SDCBP-210ENST00000522843 XAGE1AQ9HD64 81 aa3.76□□□□□ -1.81
SDCBP-210ENST00000522843 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
SDCBP-210ENST00000522843 F8W1H4 67 aa3.75□□□□□ -1.81
SDCBP-210ENST00000522843 SCGB1C2P0DMR2 95 aa3.75□□□□□ -1.81
SDCBP-210ENST00000522843 RPL18AQ02543 176 aaKnown RBP3.75□□□□□ -1.81
SDCBP-210ENST00000522843 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
SDCBP-210ENST00000522843 KCNQ1DNQ9H478 68 aa3.75□□□□□ -1.81
SDCBP-210ENST00000522843 SPCS1Q9Y6A9 102 aa3.75□□□□□ -1.81
SDCBP-210ENST00000522843 LST1O00453 97 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 ZNF861PO60384 105 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 TCL1BO95988 128 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 TRACP01848 142 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 SPRR1AP35321 89 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 PSMB2P49721 201 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 ATXN8Q156A1 80 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 FAM19A5Q7Z5A7 132 aaPredicted RBP3.74□□□□□ -1.81
SDCBP-210ENST00000522843 ANAPC11Q9NYG5 84 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 PRO0461Q9UI25 63 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
SDCBP-210ENST00000522843 TRBV10-3A0A0K0K1G6 114 aa3.73□□□□□ -1.81
SDCBP-210ENST00000522843 KRTAP16-1A8MUX0 517 aa3.73□□□□□ -1.81
SDCBP-210ENST00000522843 NDUFV3P56181 108 aaKnown RBP3.73□□□□□ -1.81
SDCBP-210ENST00000522843 Q1RN00 199 aa3.73□□□□□ -1.81
SDCBP-210ENST00000522843 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
SDCBP-210ENST00000522843 S100A7L2Q5SY68 101 aa3.73□□□□□ -1.81
SDCBP-210ENST00000522843 OR13C6PQ8NH95 151 aa3.73□□□□□ -1.81
SDCBP-210ENST00000522843 LINC00167Q96N53 147 aa3.73□□□□□ -1.81
SDCBP-210ENST00000522843 NAA38Q9BRA0 125 aaKnown RBP3.73□□□□□ -1.81
SDCBP-210ENST00000522843 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
SDCBP-210ENST00000522843 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-210ENST00000522843 H3BMG7 143 aa3.72□□□□□ -1.81
SDCBP-210ENST00000522843 H7C2G1 150 aa3.72□□□□□ -1.81
SDCBP-210ENST00000522843 TRAV23DV6A0A075B6W5 121 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 H3BQ85 93 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 NCR3O14931 201 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 ZNF73O43830 326 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-210ENST00000522843 LINC00575Q6W349 94 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 MRPL55Q7Z7F7 128 aaKnown RBP3.71□□□□□ -1.82
SDCBP-210ENST00000522843 MTURNQ8N3F0 131 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 LINC00304Q8N9R0 145 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 NKAPP1Q8N9T2 125 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 Q8NBF4 154 aa3.71□□□□□ -1.82
SDCBP-210ENST00000522843 SNCGO76070 127 aa3.7□□□□□ -1.82
SDCBP-210ENST00000522843 ELOF1P60002 83 aaKnown RBP3.7□□□□□ -1.82
SDCBP-210ENST00000522843 UBE2BP63146 152 aa3.7□□□□□ -1.82
SDCBP-210ENST00000522843 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
SDCBP-210ENST00000522843 H3BT86 120 aa3.69□□□□□ -1.82
SDCBP-210ENST00000522843 CLEC2BQ92478 149 aa3.69□□□□□ -1.82
SDCBP-210ENST00000522843 hADV29S1A0JD25 119 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms