RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 HRCT1Q6UXD1 115 aa12.43□□□□□ -0.42
HOXA3-205ENST00000522456 FAT4Q6V0I7 4981 aa12.43□□□□□ -0.42
HOXA3-205ENST00000522456 H0YGX0 51 aa12.42□□□□□ -0.42
HOXA3-205ENST00000522456 TPRXLQ17RH7 258 aa12.41□□□□□ -0.42
HOXA3-205ENST00000522456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.41□□□□□ -0.42
HOXA3-205ENST00000522456 SNCGO76070 127 aa12.4□□□□□ -0.42
HOXA3-205ENST00000522456 FP248Q71RG6 208 aaPredicted RBP12.4□□□□□ -0.42
HOXA3-205ENST00000522456 KRTAP9-2Q9BYQ4 174 aa12.4□□□□□ -0.42
HOXA3-205ENST00000522456 F8WEM9 126 aa12.38□□□□□ -0.43
HOXA3-205ENST00000522456 LOC105371267A0A1B0GV96 52 aa12.36□□□□□ -0.43
HOXA3-205ENST00000522456 K7ERJ3 54 aa12.35□□□□□ -0.43
HOXA3-205ENST00000522456 LCE2AQ5TA79 106 aaPredicted RBP12.35□□□□□ -0.43
HOXA3-205ENST00000522456 MUC17Q685J3 4493 aa12.35□□□□□ -0.43
HOXA3-205ENST00000522456 A0A0G2JQZ4 141 aa12.34□□□□□ -0.43
HOXA3-205ENST00000522456 SMIM6P0DI80 62 aa12.34□□□□□ -0.43
HOXA3-205ENST00000522456 CD164Q04900 197 aa12.34□□□□□ -0.43
HOXA3-205ENST00000522456 FAM218AQ96MZ4 157 aa12.34□□□□□ -0.43
HOXA3-205ENST00000522456 LIMD2Q9BT23 127 aa12.34□□□□□ -0.43
HOXA3-205ENST00000522456 CDIP1Q9H305 208 aa12.34□□□□□ -0.43
HOXA3-205ENST00000522456 PPDPFLQ8WWR9 84 aa12.33□□□□□ -0.44
HOXA3-205ENST00000522456 TRIAP1O43715 76 aa12.32□□□□□ -0.44
HOXA3-205ENST00000522456 PSMB2P49721 201 aa12.32□□□□□ -0.44
HOXA3-205ENST00000522456 SNHG12Q9BXW3 62 aa12.32□□□□□ -0.44
HOXA3-205ENST00000522456 OCIAD2Q56VL3 154 aa12.3□□□□□ -0.44
HOXA3-205ENST00000522456 A0A1B0GX51 115 aa12.28□□□□□ -0.44
HOXA3-205ENST00000522456 COX6CP09669 75 aa12.26□□□□□ -0.45
HOXA3-205ENST00000522456 CLEC2BQ92478 149 aa12.26□□□□□ -0.45
HOXA3-205ENST00000522456 Q6JHZ5 121 aa12.25□□□□□ -0.45
HOXA3-205ENST00000522456 IGLV8-61A0A075B6I0 122 aa12.24□□□□□ -0.45
HOXA3-205ENST00000522456 GHRHP01286 108 aa12.23□□□□□ -0.45
HOXA3-205ENST00000522456 KRTAP13-3Q3SY46 172 aa12.23□□□□□ -0.45
HOXA3-205ENST00000522456 IGFL1Q6UW32 110 aa12.22□□□□□ -0.45
HOXA3-205ENST00000522456 M0R143 59 aa12.2□□□□□ -0.46
HOXA3-205ENST00000522456 FABP2P12104 132 aa12.2□□□□□ -0.46
HOXA3-205ENST00000522456 Q5XG85 94 aa12.2□□□□□ -0.46
HOXA3-205ENST00000522456 H3BUT2 72 aa12.19□□□□□ -0.46
HOXA3-205ENST00000522456 DNAL4O96015 105 aa12.19□□□□□ -0.46
HOXA3-205ENST00000522456 NDUFV3P56181 108 aaKnown RBP12.19□□□□□ -0.46
HOXA3-205ENST00000522456 TSTD3H0UI37 97 aa12.18□□□□□ -0.46
HOXA3-205ENST00000522456 SCGB1C2P0DMR2 95 aa12.17□□□□□ -0.46
HOXA3-205ENST00000522456 TCL1BO95988 128 aa12.16□□□□□ -0.46
HOXA3-205ENST00000522456 ORMDL1Q9P0S3 153 aa12.14□□□□□ -0.47
HOXA3-205ENST00000522456 C1orf195Q5TG92 126 aa12.13□□□□□ -0.47
HOXA3-205ENST00000522456 TRBV7-7A0A0K0K1E9 115 aa12.12□□□□□ -0.47
HOXA3-205ENST00000522456 H3BMG7 143 aa12.12□□□□□ -0.47
HOXA3-205ENST00000522456 KRTAP9-6A0A140TA67 174 aa12.11□□□□□ -0.47
HOXA3-205ENST00000522456 H3BQ85 93 aa12.11□□□□□ -0.47
HOXA3-205ENST00000522456 TMEM256-PLSCR3K7ERE1 68 aa12.08□□□□□ -0.48
HOXA3-205ENST00000522456 TRACP01848 142 aa12.07□□□□□ -0.48
HOXA3-205ENST00000522456 LST1O00453 97 aa12.06□□□□□ -0.48
HOXA3-205ENST00000522456 C9orf92A6NGG3 77 aa12.04□□□□□ -0.48
HOXA3-205ENST00000522456 BATFQ16520 125 aa12.04□□□□□ -0.48
HOXA3-205ENST00000522456 ASB16-AS1Q495Z4 193 aa12.04□□□□□ -0.48
HOXA3-205ENST00000522456 TEN1Q86WV5 123 aa12.04□□□□□ -0.48
HOXA3-205ENST00000522456 NAA38Q9BRA0 125 aaKnown RBP12.04□□□□□ -0.48
HOXA3-205ENST00000522456 Q6Q795 121 aa12.03□□□□□ -0.48
HOXA3-205ENST00000522456 A0A1B0GV72 72 aa12.02□□□□□ -0.49
HOXA3-205ENST00000522456 SEC61BP60468 96 aaKnown RBP12.02□□□□□ -0.49
HOXA3-205ENST00000522456 XP32Q5T750 250 aa12.02□□□□□ -0.49
HOXA3-205ENST00000522456 ANKRD29Q8N6D5 301 aa12□□□□□ -0.49
HOXA3-205ENST00000522456 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
HOXA3-205ENST00000522456 SS18L2Q9UHA2 77 aa11.98□□□□□ -0.49
HOXA3-205ENST00000522456 ATXN8Q156A1 80 aa11.96□□□□□ -0.49
HOXA3-205ENST00000522456 A0A087WSZ3 146 aa11.95□□□□□ -0.5
HOXA3-205ENST00000522456 BAALC-AS2P0C853 105 aa11.95□□□□□ -0.5
HOXA3-205ENST00000522456 A0A1W2PNM2 257 aa11.94□□□□□ -0.5
HOXA3-205ENST00000522456 LYRM7Q5U5X0 104 aa11.91□□□□□ -0.5
HOXA3-205ENST00000522456 KRTAP4-1Q9BYQ7 146 aa11.9□□□□□ -0.5
HOXA3-205ENST00000522456 TRBV7-4A0A0J9YYF1 115 aa11.89□□□□□ -0.51
HOXA3-205ENST00000522456 RBM3P98179 157 aaKnown RBP11.89□□□□□ -0.51
HOXA3-205ENST00000522456 CCKP06307 115 aa11.88□□□□□ -0.51
HOXA3-205ENST00000522456 TRBV20-1A0A075B6N2 111 aa11.86□□□□□ -0.51
HOXA3-205ENST00000522456 DSCR8Q96T75 97 aa11.86□□□□□ -0.51
HOXA3-205ENST00000522456 C9orf118A6NHY6 69 aa11.84□□□□□ -0.51
HOXA3-205ENST00000522456 TAX1BP3O14907 124 aa11.83□□□□□ -0.52
HOXA3-205ENST00000522456 VPS25Q9BRG1 176 aa11.83□□□□□ -0.52
HOXA3-205ENST00000522456 C9JAW5 83 aa11.8□□□□□ -0.52
HOXA3-205ENST00000522456 PCOTHQ58A44 107 aa11.8□□□□□ -0.52
HOXA3-205ENST00000522456 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
HOXA3-205ENST00000522456 OBSCN-AS1Q96MR7 158 aa11.8□□□□□ -0.52
HOXA3-205ENST00000522456 Q96NJ1 140 aa11.8□□□□□ -0.52
HOXA3-205ENST00000522456 A0A1W2PPM0 123 aa11.78□□□□□ -0.52
HOXA3-205ENST00000522456 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
HOXA3-205ENST00000522456 RPL37P61927 97 aaKnown RBP11.76□□□□□ -0.53
HOXA3-205ENST00000522456 SIGMAR1Q99720 223 aa11.74□□□□□ -0.53
HOXA3-205ENST00000522456 IGKV4-1P06312 121 aa11.73□□□□□ -0.53
HOXA3-205ENST00000522456 FSIP2Q5CZC0 6907 aa11.72□□□□□ -0.53
HOXA3-205ENST00000522456 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.53
HOXA3-205ENST00000522456 LINC00472Q9H8W2 130 aa11.7□□□□□ -0.54
HOXA3-205ENST00000522456 C21orf62-AS1Q17RA5 79 aa11.69□□□□□ -0.54
HOXA3-205ENST00000522456 LOC110117498A0A087WWA1 95 aa11.68□□□□□ -0.54
HOXA3-205ENST00000522456 COL5A1-AS1Q5SY13 56 aa11.68□□□□□ -0.54
HOXA3-205ENST00000522456 Q6ZQT0 140 aa11.68□□□□□ -0.54
HOXA3-205ENST00000522456 PDE6GP18545 87 aa11.67□□□□□ -0.54
HOXA3-205ENST00000522456 LCE2CQ5TA81 110 aa11.67□□□□□ -0.54
HOXA3-205ENST00000522456 C14orf132Q9NPU4 83 aa11.67□□□□□ -0.54
HOXA3-205ENST00000522456 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
HOXA3-205ENST00000522456 H3BT86 120 aa11.65□□□□□ -0.54
HOXA3-205ENST00000522456 DSCR10P59022 87 aa11.65□□□□□ -0.54
HOXA3-205ENST00000522456 MTURNQ8N3F0 131 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 324.8 ms